CuGenDBv2

Gene ID	Cla97C02G036605
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	Cla97Chr02:20829383..20835849
RNA-Seq Expression	Cla97C02G036605
Synteny	Cla97C02G036605
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR020586 - Photosystem I PsaA/PsaB, conserved site IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ADD30829.1 photosystem I P700 apoprotein A1 [Bulnesia arborea]

6.3e-42

93.41

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Query:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        S F+  +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

KAG6467603.1 hypothetical protein ZIOFF_074546 [Zingiber officinale]

1.8e-41

88.54

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMDVFMGEVEMSR
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM   + E  + R
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMDVFMGEVEMSR

KAG6483931.1 hypothetical protein ZIOFF_060724 [Zingiber officinale]

1.8e-41

88.54

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMDVFMGEVEMSR
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM   + E  + R
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMDVFMGEVEMSR

YP_009669070.1 photosystem I P700 apoprotein A1 [Guaiacum angustifolium]

6.3e-42

93.41

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Query:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        S F+  +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

YP_009707993.1 photosystem I P700 apoprotein A1 [Ardisia solanacea]

1.8e-41

98.82

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

TrEMBL top hits

e value

%identity

Alignment

A0A218KG56 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-41

98.82

Show/hide

Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

A0A410HF85 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-41

98.82

Show/hide

Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

A0A4Y5PPT0 Photosystem I P700 chlorophyll a apoprotein A1

3.0e-42

93.41

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Query:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        S F+  +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

A0A5J6KDA3 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-42

98.82

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

D3WDE2 Photosystem I P700 chlorophyll a apoprotein A1

3.0e-42

93.41

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Query:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        S F+  +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

SwissProt top hits

e value

%identity

Alignment

Q06GZ7 Photosystem I P700 chlorophyll a apoprotein A1

5.3e-44

97.65

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

3.1e-44

98.82

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

Q9MUC0 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)

3.1e-44

98.82

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

Q9MUJ5 Photosystem I P700 chlorophyll a apoprotein A1

5.3e-44

97.65

Show/hide

Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

Q9MUJ9 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)

5.3e-44

97.65

Show/hide

Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

6.9e-23

58.11

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Query:  IPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        + +G  DFLVHH  A  +H T LIL+KG L +R S+L+PDK + G+ FPCDGPGRGGTC +SAWD  +L +FWM
Subjt:  IPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

ATCG00350.1 Photosystem I, PsaA/PsaB protein

4.9e-45

97.65

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWM

Sequences

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CDS sequence

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ATGGTTAATTTGCCCGAGATTGGCTCAAGATTTAGTTTACGATTGGCAGTGGGCGGCAAAGTTGCTTTGTTACCTATTCCGTTAGGAACCGCAGATTTTTTGGTACATCA
TATTCATGCATTTACGATTCATGTAACGGTATTGATACTCCTGAAAGGTGTTCTATTTTCTCGTAGCTCGCGTTTGATACCGGATAAAGCAAATCTTGGTTTTCGTTTCC
CTTGTGATGGACCCGGAAGAGGGGGTACATGTCAAGTATCCGCTTGGGATCATGTCTTCTTAGGGCTATTTTGGATGGATGTTTTCATGGGTGAGGTAGAGATGAGTAGG
TTTTTCACGCCACCACCTGCACTTTTAATTGTTGTGAAATTCTCCATTTAA

mRNA sequence

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Protein sequence

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MVNLPEIGSRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMDVFMGEVEMSR
FFTPPPALLIVVKFSI

Cla97C02G036605 (gene) of Watermelon (97103) v2.5 genome