; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C02G036985 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C02G036985
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionPhotosystem II reaction center protein L
Genome locationCla97Chr02:22967222..22967624
RNA-Seq ExpressionCla97C02G036985
SyntenyCla97C02G036985
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003372 - Photosystem II PsbL
IPR037266 - Photosystem II PsbL superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QKD76372.1 photosystem II protein L [Santalum album]2.3e-2398.28Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQCNSSNDKPNPNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
WP_222273419.1 hypothetical protein, partial [Modestobacter marinus]8.9e-2396.55Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
YP_009387574.1 photosystem II protein L [Hansenia weberbaueriana]1.8e-2398.28Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
YP_009860414.1 photosystem II protein L [Litsea cubeba]8.9e-2396.55Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
YP_009920018.1 photosystem II protein L [Cinnamomum longipetiolatum]8.9e-2396.55Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
TrEMBL top hitse value%identityAlignment
A0A1Y0B539 Photosystem II reaction center protein L8.7e-2498.28Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
A0A1Y0B5C9 Photosystem II reaction center protein L8.7e-2498.28Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
A0A1Y0B5U7 Photosystem II reaction center protein L8.7e-2498.28Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
A0A6C0AB03 Photosystem II reaction center protein L8.7e-2498.28Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
A0A7S9HVQ3 Photosystem II protein L8.7e-2498.28Show/hide
Query:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        WGQYQQC+SSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  WGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
SwissProt top hitse value%identityAlignment
A1EA23 Photosystem II reaction center protein L7.8e-14100Show/hide
Query:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
A4QK33 Photosystem II reaction center protein L7.8e-14100Show/hide
Query:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Q67HN6 Photosystem II reaction center protein L7.8e-14100Show/hide
Query:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Q6EYW2 Photosystem II reaction center protein L7.8e-14100Show/hide
Query:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Q7J1C4 Photosystem II reaction center protein L7.8e-14100Show/hide
Query:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Arabidopsis top hitse value%identityAlignment
ATCG00560.1 photosystem II reaction center protein L2.1e-1497.37Show/hide
Query:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
        MTQSNPNEQ+VELNRTSLYWGLLLIFVLAVLFSNYFFN
Subjt:  MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGTCAATATCAGCAATGCAATTCATCCAACGATAAACCTAATCCGAATTATAGAGCTATGACACAATCAAATCCGAACGAACAAAATGTTGAATTGAATCGTAC
CAGTCTTTACTGGGGGTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTATTTCTTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGTCAATATCAGCAATGCAATTCATCCAACGATAAACCTAATCCGAATTATAGAGCTATGACACAATCAAATCCGAACGAACAAAATGTTGAATTGAATCGTAC
CAGTCTTTACTGGGGGTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTATTTCTTCAATTAA
Protein sequenceShow/hide protein sequence
MWGQYQQCNSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN