CuGenDBv2

Gene ID	Cla97C02G040645
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	30S ribosomal protein S8, chloroplastic
Genome location	Cla97Chr02:28558503..28558875
RNA-Seq Expression	Cla97C02G040645
Synteny	Cla97C02G040645
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000630 - Ribosomal protein S8 IPR035987 - Ribosomal protein S8 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ALO21939.1 ribosomal protein S8 [Cucurbita cordata]

4.2e-25

82.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIEN+RKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

QZL38629.1 ribosomal protein S8 [Citrullus naudinianus]

3.2e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

YP_009236314.1 ribosomal protein S8 [Gynostemma pentaphyllum]

4.2e-25

82.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  NNKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQ+IPRILGG+G VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

YP_009326025.1 ribosomal protein S8 [Citrullus lanatus]

3.2e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

YP_009447486.1 ribosomal protein S8 [Cucurbita maxima]

4.2e-25

82.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIEN+RKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE42 Ribosomal protein S8

1.6e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

A0A1P8LEK4 Ribosomal protein S8

1.6e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

A0A343A8E6 30S ribosomal protein S8, chloroplastic

1.6e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

A0A7T3QNL9 Ribosomal protein S8

1.6e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

X2F6H3 30S ribosomal protein S8, chloroplastic

1.6e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQQIPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

SwissProt top hits

e value

%identity

Alignment

Q1KXS3 30S ribosomal protein S8, chloroplastic

6.7e-26

78.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  NNKDF VLTLRHRRNRK PY+ +LNLKRIS+ GL+IYS YQ+IPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

Q2MIF2 30S ribosomal protein S8, chloroplastic

5.7e-25

78.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  NNK F VLTLRHRRNRK PY+ ILNLKRIS+ GL+IYS YQ+IPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

Q49KW3 30S ribosomal protein S8, chloroplastic

5.7e-25

78.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFI+NVRKH  NNK F VLTLRHRRNRK PY+TILNLKRIS+ GL+IYS YQ+IPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

Q4VZK0 30S ribosomal protein S8, chloroplastic

1.2e-27

82.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYS YQ+IPRILGGMG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

Q68RX1 30S ribosomal protein S8, chloroplastic

5.7e-25

77.33

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  N KDF VLTLRHRRNRK PY+ ILNLKRIS+ GL+IYS YQ+IPRILGG+G VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

Arabidopsis top hits

e value

%identity

Alignment

ATCG00770.1 ribosomal protein S8

8.4e-24

73.33

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD
        GFIENVRKH  NN+ F +LTLRHRRN+KE YKTILNLKRIS+ GL+IYS  Q+IPRILGG+G VILS S+  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

Sequences

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CDS sequence

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ATGGGTTTTATTGAGAACGTACGGAAACATTGGGGAAACAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGAACCATATAAAACGATTTTAAA
TTTAAAACGGATTAGTCAATCTGGTCTCCAAATATATTCTATCTATCAACAAATTCCTAGAATTTTAGGCGGGATGGGCACTGTGATTCTTTCTATTTCTCGGGATAGAA
TGACAGACTGA

mRNA sequence

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Protein sequence

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MGFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSIYQQIPRILGGMGTVILSISRDRMTD

Cla97C02G040645 (gene) of Watermelon (97103) v2.5 genome