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Cla97C02G044720 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C02G044720
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionRING-type domain-containing protein
Genome locationCla97Chr02:32869860..32870735
RNA-Seq ExpressionCla97C02G044720
SyntenyCla97C02G044720
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0009867 - jasmonic acid mediated signaling pathway (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0042742 - defense response to bacterium (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054718.1 E3 ubiquitin-protein ligase RGLG2 [Cucumis melo var. makuwa]3.6e-4088.66Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MSK+ G PEKEAAFALAALMEVPFQYKAVTEMGLIGHVT K K IVPRPPPTRYTRPTRLT +PSNTSS SASDE +QVCPICLTAGKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

KAG7035318.1 E3 ubiquitin-protein ligase RGLG4 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3580.41Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MS+S  TPEKEAAFALAALMEVP QYKAV EM L+GHVTGK K + PRPPPTRYTRP +LTP PSNT SASASD+++QVCPICLT GKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

XP_004139915.2 E3 ubiquitin-protein ligase RGLG4 [Cucumis sativus]9.1e-3682.47Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MSK+ G  EKEAAFALAALMEVPFQYKAVTEMGL+G VTGK + IVPRPPPT YTR TRLT  PS+TSS SASDE +QVCPICLTAGKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

XP_008456279.1 PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Cucumis melo]3.6e-4088.66Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MSK+ G PEKEAAFALAALMEVPFQYKAVTEMGLIGHVT K K IVPRPPPTRYTRPTRLT +PSNTSS SASDE +QVCPICLTAGKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

XP_038901341.1 E3 ubiquitin-protein ligase RGLG4 [Benincasa hispida]3.8e-4291.75Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MSK+ GTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGK KRIVPRPPP RYTRP+RLTPIPSNTSSASA DE +QVCPICLTAGKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

TrEMBL top hitse value%identityAlignment
A0A0A0KG96 RING-type domain-containing protein4.4e-3682.47Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MSK+ G  EKEAAFALAALMEVPFQYKAVTEMGL+G VTGK + IVPRPPPT YTR TRLT  PS+TSS SASDE +QVCPICLTAGKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

A0A1S3C2F8 E3 ubiquitin-protein ligase RGLG21.7e-4088.66Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MSK+ G PEKEAAFALAALMEVPFQYKAVTEMGLIGHVT K K IVPRPPPTRYTRPTRLT +PSNTSS SASDE +QVCPICLTAGKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

A0A5A7UIE4 E3 ubiquitin-protein ligase RGLG21.7e-4088.66Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MSK+ G PEKEAAFALAALMEVPFQYKAVTEMGLIGHVT K K IVPRPPPTRYTRPTRLT +PSNTSS SASDE +QVCPICLTAGKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

A0A6J1G665 E3 ubiquitin-protein ligase RGLG4 isoform X21.3e-3579.38Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MS++  TPEKEAAFALAALMEVP QYKAV EM L+GHVTGK K + PRPPPTRYTRP +LTP PSNT SASASD+++QVCPICLT GKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

A0A6J1KZS5 E3 ubiquitin-protein ligase RGLG41.4e-3478.35Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        MS++  TPEKEAAFALAALMEVP QYKAV EM L+GHVTGK K + PR PPTR+TRP RLTP PSNT SASASD+++QVCPICLT GKDLAFGCGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

SwissProt top hitse value%identityAlignment
Q8LB88 E3 ubiquitin-protein ligase RGLG54.1e-1540.18Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL
        MSK+     KEA FAL+ALME+P QYKA  E+GL+G  TG     +  PPPT  T+  R +P                + S   S + ++ Q Q CP+CL
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL

Query:  TAGKDLAFGCGH
         + K++AF CGH
Subjt:  TAGKDLAFGCGH

Q8RX26 E3 ubiquitin-protein ligase RGLG38.0e-1142.57Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSN-TSSASASD----EQNQVCPICLTAGKDLAFGCG
        MS+     +KEAAFALAALME+PFQYKA   +      +         PPP    R   +  +P+  T +A  SD        VCPICLT  KD+AF CG
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSN-TSSASASD----EQNQVCPICLTAGKDLAFGCG

Query:  H
        H
Subjt:  H

Q9LY87 E3 ubiquitin-protein ligase RGLG23.5e-1440.98Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTR-----YTRP---------------------TRLTPIPSNTSSASASD
        M+K+     KE  FAL+ALME+P QYKA  E+ L+G   G      P PPP R     Y  P                      R +P+P  TSSAS   
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTR-----YTRP---------------------TRLTPIPSNTSSASASD

Query:  EQNQVCPICLTAGKDLAFGCGH
          NQ+CPICL+  KD+AFGCGH
Subjt:  EQNQVCPICLTAGKDLAFGCGH

Q9SAL0 E3 ubiquitin-protein ligase RGLG41.3e-2157.73Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        M+++     KE AFALAALME+PFQY+A  E+ L+G  TG  K IVPRPPP  YT PT    +PS  S   AS EQ Q CPICLT  KD+AF CGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM

Q9SS90 E3 ubiquitin-protein ligase RGLG11.9e-1239.62Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRY----------TRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDL
        MSK+     KE  FAL+ALME+P QYKA  E+ L+G   G   + +P PPP +                + P P  +   S++D+  Q+CPICL+  K++
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRY----------TRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDL

Query:  AFGCGH
        AFGCGH
Subjt:  AFGCGH

Arabidopsis top hitse value%identityAlignment
AT1G67800.1 Copine (Calcium-dependent phospholipid-binding protein) family2.9e-1640.18Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL
        MSK+     KEA FAL+ALME+P QYKA  E+GL+G  TG     +  PPPT  T+  R +P                + S   S + ++ Q Q CP+CL
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL

Query:  TAGKDLAFGCGH
         + K++AF CGH
Subjt:  TAGKDLAFGCGH

AT1G67800.2 Copine (Calcium-dependent phospholipid-binding protein) family2.9e-1640.18Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL
        MSK+     KEA FAL+ALME+P QYKA  E+GL+G  TG     +  PPPT  T+  R +P                + S   S + ++ Q Q CP+CL
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL

Query:  TAGKDLAFGCGH
         + K++AF CGH
Subjt:  TAGKDLAFGCGH

AT1G67800.3 Copine (Calcium-dependent phospholipid-binding protein) family2.9e-1640.18Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL
        MSK+     KEA FAL+ALME+P QYKA  E+GL+G  TG     +  PPPT  T+  R +P                + S   S + ++ Q Q CP+CL
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL

Query:  TAGKDLAFGCGH
         + K++AF CGH
Subjt:  TAGKDLAFGCGH

AT1G67800.4 Copine (Calcium-dependent phospholipid-binding protein) family2.9e-1640.18Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL
        MSK+     KEA FAL+ALME+P QYKA  E+GL+G  TG     +  PPPT  T+  R +P                + S   S + ++ Q Q CP+CL
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTP----------------IPSNTSSASASDEQNQVCPICL

Query:  TAGKDLAFGCGH
         + K++AF CGH
Subjt:  TAGKDLAFGCGH

AT1G79380.1 Ca(2)-dependent phospholipid-binding protein (Copine) family9.4e-2357.73Show/hide
Query:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM
        M+++     KE AFALAALME+PFQY+A  E+ L+G  TG  K IVPRPPP  YT PT    +PS  S   AS EQ Q CPICLT  KD+AF CGHM
Subjt:  MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAAAGCCACGGCACGCCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCTTTCCAGTACAAAGCAGTAACAGAAATGGGTCTTATAGGACA
TGTGACAGGAAAAACAAAACGCATTGTGCCACGACCCCCTCCAACACGTTATACTCGTCCTACACGGCTCACTCCCATACCTAGCAACACCTCCTCAGCTTCTGCATCTG
ATGAACAGAATCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGTTGAGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAAAGCCACGGCACGCCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCTTTCCAGTACAAAGCAGTAACAGAAATGGGTCTTATAGGACA
TGTGACAGGAAAAACAAAACGCATTGTGCCACGACCCCCTCCAACACGTTATACTCGTCCTACACGGCTCACTCCCATACCTAGCAACACCTCCTCAGCTTCTGCATCTG
ATGAACAGAATCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGTTGAGAGATTGA
Protein sequenceShow/hide protein sequence
MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHMLRD