; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C02G045110 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C02G045110
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationCla97Chr02:33223289..33226212
RNA-Seq ExpressionCla97C02G045110
SyntenyCla97C02G045110
Gene Ontology termsGO:0051641 - cellular localization (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463815.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]1.2e-7192.9Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

XP_011657181.1 biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumis sativus]1.2e-7192.9Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SSSG SRPDLPV PNR KFQSETERL++DVGGLE SLLQMV DH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
         TTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

XP_022948128.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata]2.2e-6889.68Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SG SR  LP   NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

XP_023534753.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]2.8e-6889.68Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SG SR  LP   NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

XP_038900751.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]1.2e-7494.84Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSSSGPSRPDLPVAPNRGKFQSETE L+++VGGLE SLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLL DAVNGGVQ+SFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

TrEMBL top hitse value%identityAlignment
A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 15.9e-7292.9Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

A0A5A7V238 Biogenesis of lysosome-related organelles complex 1 subunit 18.6e-5590.7Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIG
        ATTIARFTKQTDQWLAATHALNTAVK  G
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIG

A0A6J1D9F5 Biogenesis of lysosome-related organelles complex 1 subunit 11.4e-6585.16Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M+S SGPSRP LPVA NRG  QSETERLSS+ GGLE SLLQMV+DH +ASLKLR++SEKAKKDAIQKAVRVSDLLV AVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        A TI+RF KQTDQWL  THALNTA+KEIGDFENWIKTIDFDCKSIT AI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 11.0e-6889.68Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SG SR  LP   NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 12.6e-6788.39Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SG SR   P A NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKA+RVSDLLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

SwissProt top hitse value%identityAlignment
O22929 Biogenesis of lysosome-related organelles complex 1 subunit 13.0e-4161.36Show/hide
Query:  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT
        E E+   +   LE SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+
Subjt:  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT

Query:  AVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        AVKEIGDFENW+KT++FDCK IT AI+NI++D
Subjt:  AVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

P78537 Biogenesis of lysosome-related organelles complex 1 subunit 12.8e-1835.34Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIQNIYQ
        + D ++I TA++ +Y+
Subjt:  DFDCKSITTAIQNIYQ

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 16.6e-2038.79Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++ L T  A+F KQT QW++     N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIQNIYQ
        + D + I TA++ +Y+
Subjt:  DFDCKSITTAIQNIYQ

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 12.8e-1835.34Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIQNIYQ
        + D ++I TA++ +Y+
Subjt:  DFDCKSITTAIQNIYQ

Q54VX7 Biogenesis of lysosome-related organelles complex 1 subunit 12.8e-1842.61Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L ++V DH     KL+E +E  KK+AI     V++ L+D+VN GV   F NQK +E E R L    A+F+KQT+QW+      N ++KEIGD ENW K I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIQNIY
        + D  +I+  I+ +Y
Subjt:  DFDCKSITTAIQNIY

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein2.2e-4261.36Show/hide
Query:  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT
        E E+   +   LE SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+
Subjt:  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT

Query:  AVKEIGDFENWIKTIDFDCKSITTAIQNIYQD
        AVKEIGDFENW+KT++FDCK IT AI+NI++D
Subjt:  AVKEIGDFENWIKTIDFDCKSITTAIQNIYQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGG
TTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATC
TTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAG
ACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTAC
AGCCATCCAAAACATTTATCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGG
TTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATC
TTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAG
ACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTAC
AGCCATCCAAAACATTTATCAAGACTGA
Protein sequenceShow/hide protein sequence
MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQ
TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD