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Cla97C04G069760 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C04G069760
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionF-box protein
Genome locationCla97Chr04:7056601..7057188
RNA-Seq ExpressionCla97C04G069760
SyntenyCla97C04G069760
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579359.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]7.8e-3788.3Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        MQTSSA SAAHLLAQGVEA+LPKQKRN+AIVEFKKAMVAHKR SKA QE KGS+QLPQDVLLHIFRFLD+ SLVSAGLVCRSWN AA+DEYLWQ
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

XP_022157180.1 F-box protein At5g52880 [Momordica charantia]7.8e-3790.22Show/hide
Query:  SSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL
        SSA SAAHLLAQGVEAA PK+KRN+AIVEFKKAMVAHKR SKAHQEEKGSAQLPQDVLLHIFRFLD+ SLVSAGLVCRSWNVAA+DE+LWQL
Subjt:  SSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL

XP_022922153.1 F-box protein At5g52880 isoform X2 [Cucurbita moschata]7.8e-3788.3Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        MQTSSA SAAHLLAQGVEA+LPKQKRN+AIVEFKKAMVAHKR SKA QE KGS+QLPQDVLLHIFRFLD+ SLVSAGLVCRSWN AA+DEYLWQ
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

XP_038874449.1 F-box protein At5g52880 isoform X1 [Benincasa hispida]6.8e-4195.79Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL
        MQTSSAASAAHLLAQGVEAALPKQKRN+AIVEFKKAMVAHKR SKAHQEEKGSAQLPQDVLLHIFRFLDV+SLVSAGLVCRSWNVAA+DEYLWQL
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL

XP_038874450.1 F-box protein At5g52880 isoform X2 [Benincasa hispida]6.8e-4195.79Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL
        MQTSSAASAAHLLAQGVEAALPKQKRN+AIVEFKKAMVAHKR SKAHQEEKGSAQLPQDVLLHIFRFLDV+SLVSAGLVCRSWNVAA+DEYLWQL
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL

TrEMBL top hitse value%identityAlignment
A0A0A0KNE5 F-box domain-containing protein4.9e-3787.37Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL
        MQTSSAASAA LLA+ VEAALPKQKRN+ IVEFKKAMV HKR +KAHQEEKGS QLPQDVLLHIFRF+DV+SLVSAGLVCRSWNVAA DEYLWQL
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL

A0A5A7TKV8 F-box protein4.9e-3788.42Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL
        MQTSSAASAA LLAQ VEAALPKQKRN+ IVE+KKAMV HKR SKAHQEEKGS QLPQDVLLHIFRFLDV+SL SAGLVCRSWNVAA+DEYLWQL
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL

A0A6J1DSD8 F-box protein At5g528803.8e-3790.22Show/hide
Query:  SSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL
        SSA SAAHLLAQGVEAA PK+KRN+AIVEFKKAMVAHKR SKAHQEEKGSAQLPQDVLLHIFRFLD+ SLVSAGLVCRSWNVAA+DE+LWQL
Subjt:  SSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL

A0A6J1E2E9 F-box protein At5g52880 isoform X13.8e-3788.3Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        MQTSSA SAAHLLAQGVEA+LPKQKRN+AIVEFKKAMVAHKR SKA QE KGS+QLPQDVLLHIFRFLD+ SLVSAGLVCRSWN AA+DEYLWQ
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

A0A6J1E5S5 F-box protein At5g52880 isoform X23.8e-3788.3Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        MQTSSA SAAHLLAQGVEA+LPKQKRN+AIVEFKKAMVAHKR SKA QE KGS+QLPQDVLLHIFRFLD+ SLVSAGLVCRSWN AA+DEYLWQ
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

SwissProt top hitse value%identityAlignment
P34284 F-box/LRR-repeat protein fbxl-11.4e-0448.72Show/hide
Query:  LPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        LP++VLL +F FLD ++L  +  VCRSW++ A D   WQ
Subjt:  LPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

Q2T9S7 F-box only protein 71.8e-0446.51Show/hide
Query:  GSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        G   LP ++ L IFR LDVRS++S   VCR   + +ND+ LW+
Subjt:  GSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

Q969U6 F-box/WD repeat-containing protein 52.4e-0439.13Show/hide
Query:  EEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        +E G+  LP  ++  IF  L    +++AGLVCR W   + DE+LW+
Subjt:  EEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

Q9FLX3 F-box protein At5g528801.1e-2057.89Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEK-GSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        + TS+A SAA+LL + VEA LPKQK+N AIVEFK+A VA KR SK  +EE      LPQD+L+HIF FL++ SLVS+  V RSWN A ++  LWQ
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEK-GSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

Q9Y3I1 F-box only protein 73.1e-0448.84Show/hide
Query:  GSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        G   LP ++ L IFR LDVRS++S   VCR    A+ND  LW+
Subjt:  GSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

Arabidopsis top hitse value%identityAlignment
AT5G45360.1 F-box family protein2.4e-0446.15Show/hide
Query:  LPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        +P ++  HI +FL    LVS  LVC+  N AA DE LW+
Subjt:  LPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

AT5G48170.1 F-box family protein9.3e-0447.22Show/hide
Query:  DVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        DVL+ I R LD  SL SA  VCR W+  A ++ +W+
Subjt:  DVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ

AT5G52880.1 F-box family protein7.6e-2257.89Show/hide
Query:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEK-GSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ
        + TS+A SAA+LL + VEA LPKQK+N AIVEFK+A VA KR SK  +EE      LPQD+L+HIF FL++ SLVS+  V RSWN A ++  LWQ
Subjt:  MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEK-GSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACGAGCTCTGCTGCTTCAGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATGCAGCGATAGTAGAATTTAAGAAAGCAAT
GGTTGCTCATAAGAGGGGTAGTAAAGCACATCAGGAAGAAAAAGGTTCTGCTCAACTCCCTCAAGACGTTCTCCTCCACATCTTCCGCTTTCTAGATGTTCGATCTTTAG
TTTCAGCTGGGCTAGTATGCCGGTCGTGGAATGTAGCAGCAAATGATGAATATTTGTGGCAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGACGAGCTCTGCTGCTTCAGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATGCAGCGATAGTAGAATTTAAGAAAGCAAT
GGTTGCTCATAAGAGGGGTAGTAAAGCACATCAGGAAGAAAAAGGTTCTGCTCAACTCCCTCAAGACGTTCTCCTCCACATCTTCCGCTTTCTAGATGTTCGATCTTTAG
TTTCAGCTGGGCTAGTATGCCGGTCGTGGAATGTAGCAGCAAATGATGAATATTTGTGGCAGTTGTAG
Protein sequenceShow/hide protein sequence
MQTSSAASAAHLLAQGVEAALPKQKRNAAIVEFKKAMVAHKRGSKAHQEEKGSAQLPQDVLLHIFRFLDVRSLVSAGLVCRSWNVAANDEYLWQL