; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C04G072000 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C04G072000
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptionbinding partner of ACD11 1-like
Genome locationCla97Chr04:18640409..18646646
RNA-Seq ExpressionCla97C04G072000
SyntenyCla97C04G072000
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]7.0e-13192.25Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        +QSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+EMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P IEDSASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]3.1e-13192.62Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+EMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P IEDSASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]5.9e-13091.88Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+E+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P  EDSASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

XP_038881170.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]1.5e-12888.19Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLL-----------------SGATIVDQIVSISPAENHVP
        MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTFRDPKALEIALLL                 SGATIVDQIVSIS AENHVP
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLL-----------------SGATIVDQIVSISPAENHVP

Query:  RKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMS
        R+EMQEVRVVDNAACLTPTENNFP  EDSASQPSSGKMYVNRAQ VVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+S
Subjt:  RKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMS

Query:  VVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        VVNEKVKS+DQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAG AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+LTSKE  VVA
Subjt:  VVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]8.2e-13293.73Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTFRDPKALEIALLLSGATIVDQIVSIS AENHVPR+EMQEVRVVDNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENNFP  EDSASQPSSGKMYVNRAQ VVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQNLHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTAG AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+LTSKE  VVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein1.5e-13192.62Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+EMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P IEDSASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

A0A1S3CIA3 binding partner of ACD11 1-like2.9e-13091.88Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+E+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P  EDSASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

A0A5D3BPG7 Binding partner of ACD11 1-like2.9e-13091.88Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+E+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P  EDSASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

A0A6J1DJX5 binding partner of ACD11 15.9e-12890.77Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        MQS+TRTVQV HVSDLAT+REIHEFFSFSGEIEHIEIQCE G SK AFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVP++E+QEVRVVDNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
         TENN P  EDSASQPS G+MYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKHRLTASAS KVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTAG AWLNGAFGKVAKAGQAAG+KTREKFHLAMS+LTSKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

A0A6J1IKN1 binding partner of ACD11 11.7e-12789.67Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        MQSQTRTVQ ++VSDLAT+REIHEFFSFSGEIEH+EIQCEQG SK AFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPR+EMQEVR VDNAA LT
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENNFP IEDSASQPSSG+MYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD++VGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA
        KTMAAIFAAERK+NDTGSAVKTSKYVT+G AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+LTSK  PV A
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

SwissProt top hitse value%identityAlignment
P87216 Protein vip15.2e-0422.18Show/hide
Query:  VQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFP
        V V ++S   T+++I +FFSF G++ +I  + + G ++ A + F  P A + ALLL  A +    + I+  +                AA  T       
Subjt:  VQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFP

Query:  CIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAIF
          +  A    + +        +++ +L++G  +    + K+   D+ + +++          K  G+ E    G+  VNE+    ++   V +K     F
Subjt:  CIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAIF

Query:  AAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKF
        A   KLN T S V T  +    TA           AG +AG K +  +
Subjt:  AAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKF

Q9LFD5 Binding partner of ACD11 12.6e-4842.91Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        M SQ R+V+V ++S  AT+ +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
              P    + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K++DQN  V++
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.3e-5245.63Show/hide
Query:  TVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNF
        TV+V +VS  AT R++ EFFSFSG+I ++E Q E   +K A+VTF+D +  E A+LLSGATIVD  V +S A ++    E          A L P     
Subjt:  TVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNF

Query:  PCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAI
           +DS   P +G   + +A++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFDK++G T+K+  G  VV EKV+ +DQ   VS+KT +AI
Subjt:  PCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV  G  W+ GAF KVAKA +  G K +EK  +A
Subjt:  FAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 11.9e-4942.91Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        M SQ R+V+V ++S  AT+ +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
              P    + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K++DQN  V++
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 11.9e-4942.91Show/hide
Query:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT
        M SQ R+V+V ++S  AT+ +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLT

Query:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
              P    + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K++DQN  V++
Subjt:  PTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein7.0e-9770.57Show/hide
Query:  TRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTEN
        TR+VQV +VSDLAT+REIHEFFSFSG+IEHIEIQ E G S+ AFVTF DPKALEIALLLSGATIVDQIV+I+ AEN+V R+E QEVR++DNA  L   E+
Subjt:  TRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTEN

Query:  NFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMA
             +   +   + + YV++AQ+VVATVLAKGS +GQDA+NKAKAFDEKH+L A+ASAKV SFDKRVGLTEKL+VG+S VNEKVKS+DQ L VSDKTMA
Subjt:  NFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMA

Query:  AIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPV
        AIFAAERKLNDTGSAVK+S+YVTAG AW +GAF KVA+ GQ AG+KT+EKF+LA+S+++SK+ P+
Subjt:  AIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPV

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-5041.29Show/hide
Query:  TVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRKEMQEVRVVDNAACLTPTENN
        TV+V +VS  AT+R++ EFFSFSG+I ++E Q E  GSK A+VTF+D +  E A+LL+G+TIVD  V+++ + ++ +P   +  +  +  +      +++
Subjt:  TVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRKEMQEVRVVDNAACLTPTENN

Query:  FPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAA
         P  ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFDKR+G TEK+  G +VV+EKVK +DQ   V++KT +A
Subjt:  FPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAA

Query:  IFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPV
        I AAE+ +++ GSA+  ++YV  G  W+ GAF +V+KA +  G K +EK  LA      K+  V
Subjt:  IFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGAT
TCAATGTGAACAAGGGGGATCCAAGGCTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGA
GCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTTGTATTGAG
GATTCTGCAAGCCAACCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAA
GGCAAAAGCATTCGATGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAG
TGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTC
AAAACAAGCAAGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTT
GGCTATGTCAAGCTTAACTTCAAAGGAACCCCCAGTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
TTTCTATCAATAGAGTTTAGATAAAAATGACTTTTTAGAAAAATAATCTTTTCCCTAGTTAATTCAAACAGATCCTAAAATTGGACATTTGTAAGTATAAGTACCAAAAC
CTAATAAACTAAAAAAAATGAAAATGAAAATGAAAATGAAAGGGGACAAATTTGGAAAGTGAAATTTCCTGACATACTAATTTCCTTGATTTTTATCTGTCTCACGCTTT
GTCCGGTGATACTTCTTTCAAATTGCCTCCAAGCTCCAACTTGTACAACTTCCTCTCTCTCTCTTCAAGAAATTCGCCAAATTCTTCGATAATTAGCAATGCAGTCTCAG
ACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATGTGAACA
AGGGGGATCCAAGGCTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCCG
CTGAAAATCATGTACCAAGAAAAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTTGTATTGAGGATTCTGCAAGC
CAACCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAAGGCAAAAGCATT
CGATGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAGTGGTTAACGAGA
AAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAAACAAGCAAG
TATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTTGGCTATGTCAAG
CTTAACTTCAAAGGAACCCCCAGTTGTTGCCTAACCTTAAAACTTAGGCTTCAAGAAAGTCACTTGCCTTGGCTACTTGTATTTTCAGTGGGGGATTGAAATGAGTTTCT
TCAATTCTATTTCTTCAGGTTATTTCTTTTTCCTGAGGACGGTGCTCTATTATTATTATTTATTATTATTAGTATCATTTTTTATATTGTTCATATTCTTTAATTACAAG
GGGGGTTTGGCTGATGACAATTATGTATTTGTAAGATTGGTTATGGAAGTGTAAAGAAAATCCAATTATGGTTTGTCTTATACTCTTAATTATTTGTTTAGGAGTATATC
AAAGTTTGTGGCTCAGCTTGCTTCTTGCTGTCA
Protein sequenceShow/hide protein sequence
MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIE
DSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAV
KTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA