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Cla97C04G075005 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C04G075005
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionCCHC-type domain-containing protein
Genome locationCla97Chr04:22603542..22604398
RNA-Seq ExpressionCla97C04G075005
SyntenyCla97C04G075005
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCI00644.1 zinc CCHC-type-like protein [Trifolium medium]5.7e-0830.07Show/hide
Query:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQM-KHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS--RM
        ME W+K+ L+KEEE    GF+     +  D++  + LVGKL +      +I K     AWR      V++L +NLFLF+F + +D +  ++N  WS  R 
Subjt:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQM-KHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS--RM

Query:  LLKGRRMVGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSL
        LL  +R+ G+    D ++              + +FW  ++ L
Subjt:  LLKGRRMVGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSL

PNX69407.1 cysteine desulfurase mitochondrial-like, partial [Trifolium pratense]8.8e-0941.67Show/hide
Query:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQ-MKHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS
        MEDWKK+ L K+EE    GF  + + L+ D      LVGK+ +  S   +I K     AWR      V+ L +NLFLFKF   RD E  L+N  WS
Subjt:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQ-MKHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS

PNY16581.1 cysteine desulfurase mitochondrial-like [Trifolium pratense]7.5e-0830.77Show/hide
Query:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQM-KHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS--RM
        ME+WK + L+KEEE    GF+     +  +++  + LVGKL +      +I K     AWR      +++L +NLFLF+F + RD E  LRN  WS  R 
Subjt:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQM-KHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS--RM

Query:  LLKGRRMVGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSL
        ++  +R+ G+    D ++              + +FW  I+ L
Subjt:  LLKGRRMVGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSL

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]9.7e-0833.33Show/hide
Query:  MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWRTNL-GFNVENLGRNLFLFKFDAWRDKEMALRNVD
        M A  L+E+WK  +L+ EE++  +  D          ++  L+ KLLS RSI+  ++KNT   AW+ +   F+V+ +G N+FLF F+   D+   LR   
Subjt:  MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWRTNL-GFNVENLGRNLFLFKFDAWRDKEMALRNVD

Query:  WS--RMLLKGRRMVGN--SAKPDGDLDFTNLS
        W+  R L+    ++ N  S     D+DF N+S
Subjt:  WS--RMLLKGRRMVGN--SAKPDGDLDFTNLS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.6e-1035.66Show/hide
Query:  MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWR-TNLGFNVENLGRNLFLFKFDAWRDKEMALRNVD
        M   +L+E+WK  +L+ EEE T I  D         +++  LVGKL   R I   ++KNT  +AW+  N  F V++LG NLFLF F    D+    ++  
Subjt:  MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWR-TNLGFNVENLGRNLFLFKFDAWRDKEMALRNVD

Query:  WS--RMLLKGRRMVGNSAKPDGDLDFTNL
        W+  R L+   + V  +  P  +LDFT L
Subjt:  WS--RMLLKGRRMVGNSAKPDGDLDFTNL

TrEMBL top hitse value%identityAlignment
A0A2K3KSY8 Cysteine desulfurase mitochondrial-like (Fragment)4.3e-0941.67Show/hide
Query:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQ-MKHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS
        MEDWKK+ L K+EE    GF  + + L+ D      LVGK+ +  S   +I K     AWR      V+ L +NLFLFKF   RD E  L+N  WS
Subjt:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQ-MKHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS

A0A2K3PMS8 Cysteine desulfurase mitochondrial-like3.6e-0830.77Show/hide
Query:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQM-KHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS--RM
        ME+WK + L+KEEE    GF+     +  +++  + LVGKL +      +I K     AWR      +++L +NLFLF+F + RD E  LRN  WS  R 
Subjt:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQM-KHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS--RM

Query:  LLKGRRMVGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSL
        ++  +R+ G+    D ++              + +FW  I+ L
Subjt:  LLKGRRMVGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSL

A0A392NMN9 Zinc CCHC-type-like protein (Fragment)2.8e-0830.07Show/hide
Query:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQM-KHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS--RM
        ME W+K+ L+KEEE    GF+     +  D++  + LVGKL +      +I K     AWR      V++L +NLFLF+F + +D +  ++N  WS  R 
Subjt:  MEDWKKLRLSKEEERTRIGFDPQHDPLISDQM-KHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWS--RM

Query:  LLKGRRMVGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSL
        LL  +R+ G+    D ++              + +FW  ++ L
Subjt:  LLKGRRMVGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSL

A0A6J1BSZ1 uncharacterized protein LOC1110054814.7e-0833.33Show/hide
Query:  MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWRTNL-GFNVENLGRNLFLFKFDAWRDKEMALRNVD
        M A  L+E+WK  +L+ EE++  +  D          ++  L+ KLLS RSI+  ++KNT   AW+ +   F+V+ +G N+FLF F+   D+   LR   
Subjt:  MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWRTNL-GFNVENLGRNLFLFKFDAWRDKEMALRNVD

Query:  WS--RMLLKGRRMVGN--SAKPDGDLDFTNLS
        W+  R L+    ++ N  S     D+DF N+S
Subjt:  WS--RMLLKGRRMVGN--SAKPDGDLDFTNLS

A0A6J1DX30 uncharacterized protein LOC1110248741.7e-1035.66Show/hide
Query:  MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWR-TNLGFNVENLGRNLFLFKFDAWRDKEMALRNVD
        M   +L+E+WK  +L+ EEE T I  D         +++  LVGKL   R I   ++KNT  +AW+  N  F V++LG NLFLF F    D+    ++  
Subjt:  MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWR-TNLGFNVENLGRNLFLFKFDAWRDKEMALRNVD

Query:  WS--RMLLKGRRMVGNSAKPDGDLDFTNL
        W+  R L+   + V  +  P  +LDFT L
Subjt:  WS--RMLLKGRRMVGNSAKPDGDLDFTNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGAGGAGTTGATGGAAGATTGGAAGAAACTTCGATTATCGAAAGAAGAAGAGAGGACTCGGATTGGATTTGATCCTCAACACGATCCCTTAATTTCGGATCA
GATGAAACATTGCTTGGTAGGGAAGCTTCTGTCGGCCCGCTCTATTGCACCACAAATTATTAAGAACACATTTGCGAGTGCATGGAGGACTAACCTTGGTTTTAATGTTG
AAAACTTGGGAAGAAATCTATTCTTGTTCAAGTTTGATGCATGGAGGGATAAAGAAATGGCCCTAAGGAATGTAGATTGGAGCAGAATGTTATTGAAGGGGAGGCGAATG
GTTGGCAATTCAGCAAAACCTGATGGAGATCTTGATTTCACGAATTTGTCTTATGAAAGGCAAAAGATCACTGGAACAGAGGATTTTTGGAACCCCATCTTTAGTCTGCA
AAATCTGGATCTTAATTTTGTTCTCCCGACTCCTCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGAGGAGTTGATGGAAGATTGGAAGAAACTTCGATTATCGAAAGAAGAAGAGAGGACTCGGATTGGATTTGATCCTCAACACGATCCCTTAATTTCGGATCA
GATGAAACATTGCTTGGTAGGGAAGCTTCTGTCGGCCCGCTCTATTGCACCACAAATTATTAAGAACACATTTGCGAGTGCATGGAGGACTAACCTTGGTTTTAATGTTG
AAAACTTGGGAAGAAATCTATTCTTGTTCAAGTTTGATGCATGGAGGGATAAAGAAATGGCCCTAAGGAATGTAGATTGGAGCAGAATGTTATTGAAGGGGAGGCGAATG
GTTGGCAATTCAGCAAAACCTGATGGAGATCTTGATTTCACGAATTTGTCTTATGAAAGGCAAAAGATCACTGGAACAGAGGATTTTTGGAACCCCATCTTTAGTCTGCA
AAATCTGGATCTTAATTTTGTTCTCCCGACTCCTCTATAA
Protein sequenceShow/hide protein sequence
MEAEELMEDWKKLRLSKEEERTRIGFDPQHDPLISDQMKHCLVGKLLSARSIAPQIIKNTFASAWRTNLGFNVENLGRNLFLFKFDAWRDKEMALRNVDWSRMLLKGRRM
VGNSAKPDGDLDFTNLSYERQKITGTEDFWNPIFSLQNLDLNFVLPTPL