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Cla97C04G076110 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C04G076110
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionTranscription factor RAX2-like protein
Genome locationCla97Chr04:23521386..23521902
RNA-Seq ExpressionCla97C04G076110
SyntenyCla97C04G076110
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020574551.1 transcription factor RAX2-like [Phalaenopsis equestris]6.6e-3979.59Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEED KLK +I  +GIGGNWISLPQKAG           KRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLF +IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

XP_020574766.1 transcription factor MYB36-like [Phalaenopsis equestris]6.6e-3979.59Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEED KLK +I  +GIGGNWISLPQKAG           KRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLF +IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

XP_022948843.1 transcription factor MYB36-like [Cucurbita moschata]3.9e-3977.55Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGR+PCCDKANVK+GPWSPEEDAKLK +IHNHG GGNWISLPQKAG           KRCGKSCRLRWLNYLRPNIKHG F+++EDRIIC+LF+TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

XP_022998892.1 transcription factor MYB36-like [Cucurbita maxima]3.9e-3977.55Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGR+PCCDKANVK+GPWSPEEDAKLK +IHNHG GGNWISLPQKAG           KRCGKSCRLRWLNYLRPNIKHG F+++EDRIIC+LF+TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

XP_038882300.1 transcription factor RAX2-like [Benincasa hispida]5.1e-3977.55Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGR+PCCDKA+VK+GPWSPEEDAKLKQHIHNHG GGNWISLP +AG           KRCGKSCRLRWLNYLRP+IKHG+F++DEDRIICSLF TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

TrEMBL top hitse value%identityAlignment
A0A5D2JHU1 Uncharacterized protein7.2e-3977.55Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEEDAKLK++I  HG GGNWI+LPQKAG           KRCGKSCRLRWLNYLRPNIKHG FSDDEDRIIC+LF +IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

A0A5D2P872 Uncharacterized protein7.2e-3977.55Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEEDAKLK++I  HG GGNWI+LPQKAG           KRCGKSCRLRWLNYLRPNIKHG FSDDEDRIIC+LF +IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

A0A5N6RLJ6 Uncharacterized protein5.5e-3979.59Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVKRGPWSPEEDAKLK++I   G GGNWI+LPQKAG           KRCGKSCRLRWLNYLRPNIKHG FSDDEDRIICSLF TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

A0A6J1GAF5 transcription factor MYB36-like1.9e-3977.55Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGR+PCCDKANVK+GPWSPEEDAKLK +IHNHG GGNWISLPQKAG           KRCGKSCRLRWLNYLRPNIKHG F+++EDRIIC+LF+TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

A0A6J1K990 transcription factor MYB36-like1.9e-3977.55Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGR+PCCDKANVK+GPWSPEEDAKLK +IHNHG GGNWISLPQKAG           KRCGKSCRLRWLNYLRPNIKHG F+++EDRIIC+LF+TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

SwissProt top hitse value%identityAlignment
F4JSU0 Transcription factor MYB873.5e-3568.37Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDK  VK+GPWS EEDA LK +I  HG G NWISLPQ+ G           KRCGKSCRLRWLNYLRPN+KHG F+D+ED IICSL+ TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

Q9FG68 Transcription factor RAX11.2e-3569.39Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDK  VKRGPWSPEED+KL+ +I  +G GGNWIS P KAG           +RCGKSCRLRWLNYLRPNIKHG+FS++EDRII SLF  IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

Q9FKL2 Transcription factor MYB363.8e-3771.43Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEED KLK +I  +G GGNWI+LPQK G           KRCGKSCRLRWLNYLRPNIKHG FS++EDRII SL+ +IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

Q9M2Y9 Transcription factor RAX31.2e-3873.47Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEEDAKLK +I N G GGNWI+LPQK G           KRCGKSCRLRWLNYLRPNIKHG FS++E+ IICSL+ TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

Q9SJL7 Transcription factor RAX21.1e-3670.41Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVKRGPWSPEEDAKLK +I   G GGNWI+LP KAG           +RCGKSCRLRWLNYLRPNI+HG+F+++ED II SLF +IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

Arabidopsis top hitse value%identityAlignment
AT2G36890.1 Duplicated homeodomain-like superfamily protein7.8e-3870.41Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVKRGPWSPEEDAKLK +I   G GGNWI+LP KAG           +RCGKSCRLRWLNYLRPNI+HG+F+++ED II SLF +IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

AT3G49690.1 myb domain protein 848.4e-4073.47Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEEDAKLK +I N G GGNWI+LPQK G           KRCGKSCRLRWLNYLRPNIKHG FS++E+ IICSL+ TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

AT5G23000.1 myb domain protein 378.7e-3769.39Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDK  VKRGPWSPEED+KL+ +I  +G GGNWIS P KAG           +RCGKSCRLRWLNYLRPNIKHG+FS++EDRII SLF  IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

AT5G57620.1 myb domain protein 362.7e-3871.43Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEED KLK +I  +G GGNWI+LPQK G           KRCGKSCRLRWLNYLRPNIKHG FS++EDRII SL+ +IGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS

AT5G65790.1 myb domain protein 681.1e-3972.45Show/hide
Query:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS
        MGRAPCCDKANVK+GPWSPEEDAKLK +I N G GGNWI+LPQK G           +RCGKSCRLRWLNYLRPNIKHG FS++ED IIC+L+ TIGS
Subjt:  MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAGCTCCATGTTGTGACAAAGCAAATGTGAAGAGAGGGCCTTGGTCACCTGAAGAAGATGCAAAGCTCAAACAACATATTCATAACCATGGGATTGGTGGCAA
TTGGATATCCCTCCCTCAAAAAGCTGGTAACATACAAACCCTAATTTTCTTCTCTTCGACTAAGCGATGCGGGAAAAGTTGCAGATTGAGATGGCTTAATTATCTCAGAC
CAAACATTAAACATGGCAATTTCAGTGATGATGAAGATCGGATTATTTGTTCCCTCTTCACCACCATAGGAAGCAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAGCTCCATGTTGTGACAAAGCAAATGTGAAGAGAGGGCCTTGGTCACCTGAAGAAGATGCAAAGCTCAAACAACATATTCATAACCATGGGATTGGTGGCAA
TTGGATATCCCTCCCTCAAAAAGCTGGTAACATACAAACCCTAATTTTCTTCTCTTCGACTAAGCGATGCGGGAAAAGTTGCAGATTGAGATGGCTTAATTATCTCAGAC
CAAACATTAAACATGGCAATTTCAGTGATGATGAAGATCGGATTATTTGTTCCCTCTTCACCACCATAGGAAGCAGTTAA
Protein sequenceShow/hide protein sequence
MGRAPCCDKANVKRGPWSPEEDAKLKQHIHNHGIGGNWISLPQKAGNIQTLIFFSSTKRCGKSCRLRWLNYLRPNIKHGNFSDDEDRIICSLFTTIGSS