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Cla97C04G076130 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C04G076130
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptionzinc finger protein 593
Genome locationCla97Chr04:23527137..23529120
RNA-Seq ExpressionCla97C04G076130
SyntenyCla97C04G076130
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR013087 - Zinc finger C2H2-type
IPR022755 - Zinc finger, double-stranded RNA binding
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143276.1 zinc finger protein 593 [Cucumis sativus]2.4e-5994.96Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL K EVE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_008462489.1 PREDICTED: zinc finger protein 593 [Cucumis melo]2.8e-6095.8Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL K EVE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM+GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_022143723.1 zinc finger protein 593 [Momordica charantia]3.7e-6094.96Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDEL K +VE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+KLMTGPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLM+M
Subjt:  AELAAGMGMPDNGPKLMAM

XP_022962632.1 zinc finger protein 593 [Cucurbita moschata]9.1e-5993.28Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFL+ GDDMVYD L K EVE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_038882974.1 zinc finger protein 593 [Benincasa hispida]8.2e-6095.8Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDEL K EVEK SLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+KLM GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

TrEMBL top hitse value%identityAlignment
A0A0A0KHA1 C2H2-type domain-containing protein1.2e-5994.96Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL K EVE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A1S3CH13 zinc finger protein 5931.4e-6095.8Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL K EVE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM+GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1CRE9 zinc finger protein 5931.8e-6094.96Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDEL K +VE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+KLMTGPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLM+M
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1HD68 zinc finger protein 5934.4e-5993.28Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFL+ GDDMVYD L K EVE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1I5Q7 zinc finger protein 5931.3e-5892.44Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHK+ARRTKFL+ GDDMVYD L K EVE+PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

SwissProt top hitse value%identityAlignment
B0BLT0 Zinc finger protein 5933.5e-1345.28Show/hide
Query:  HRSVKKRRYSH--KTARRTKFLVKGDDMVYDELTKFEVEKPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAE
        H+S KK+  S   KT RR K L    D ++ ++ K E  K  L   +D  LPG  Q+YCLHC RYF ++    EHFKTK H++R+K +    P+TQ +AE
Subjt:  HRSVKKRRYSH--KTARRTKFLVKGDDMVYDELTKFEVEKPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAE

Query:  LAAGMG
         AAGMG
Subjt:  LAAGMG

Q08004 Bud site selection protein 201.5e-1141.58Show/hide
Query:  RYS---HKTARRTKFLVKGDDMVYDEL-TKFEVEK-PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAAGMG
        RYS   +KT RRT+ L    D++Y++L TK  V+K  + P+DE  PG+GQ+YC+HC +Y         H K K H++RVK + G  P+TQ  ++ AAG  
Subjt:  RYS---HKTARRTKFLVKGDDMVYDEL-TKFEVEK-PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAAGMG

Query:  M
        +
Subjt:  M

Q553S1 Zinc finger protein 593 homolog2.5e-1135.04Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPS-LPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQL
        MG    H     ++  +K AR TK   K  D ++DE+    ++K S   VD DLPGMGQ YC+HC ++F        H K K H+ RVK +    P++  
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPS-LPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQL

Query:  DAELAAGMGMPDNGPKL
        ++++       DNG KL
Subjt:  DAELAAGMGMPDNGPKL

Q9P370 Zinc finger protein bud207.3e-1136.19Show/hide
Query:  VKKRRYSHKTAR----RTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAA
        V ++R  H        RT+   +  D ++++LT+ E +   LP+D DLPG+GQ+YC+ C RYF +      H K K H++R+K +    P+TQ +AE A 
Subjt:  VKKRRYSHKTAR----RTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAA

Query:  GMGMP
         +G P
Subjt:  GMGMP

Q9U239 Zinc finger protein 593 homolog2.8e-1036.54Show/hide
Query:  PHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEK-PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELA
        P    +K   S+KT +R     K  D ++++L   +  K     +D DLPG GQ+YC+ C+R+F +   R  H KTK H+ RVK +    P+TQ +A  A
Subjt:  PHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEK-PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELA

Query:  AGMG
         G G
Subjt:  AGMG

Arabidopsis top hitse value%identityAlignment
AT2G36930.1 zinc finger (C2H2 type) family protein4.5e-4875Show/hide
Query:  GKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAE
        G+CP R VKKRR SHKTARR KF VKGDD+VY EL K E E   L +DEDLPGMGQ+YCLHCDRYF+NVSVRD+HFKTK+H+KRV +M G APH+QLDA+
Subjt:  GKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAE

Query:  LAAGMGMPDNGPKLMA
        LA GMGMPDNGPKLM+
Subjt:  LAAGMGMPDNGPKLMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTAAGTGCCCTCACAGAAGCGTAAAGAAGCGGAGATACTCGCACAAGACCGCTCGGCGCACGAAATTTCTTGTCAAAGGCGATGATATGGTTTACGATGAGTT
GACGAAATTCGAGGTGGAGAAGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGATCGATACTTTGCGAATGTGTCTGTGA
GGGATGAACATTTCAAGACCAAGCGTCACAGGAAGCGGGTAAAACTAATGACGGGTCCTGCACCTCACACGCAACTGGATGCCGAGCTAGCTGCTGGGATGGGCATGCCT
GATAACGGTCCAAAGCTTATGGCAATGTGA
mRNA sequenceShow/hide mRNA sequence
GAAGCCTATACGATATTGCCGCTTACATCTCATTCCCTCTTCTCTCTTTCCCTTGCTAGGGCTCTGGTGGAACAGCCACCGATAAAACCCTAATTTTTTCTTCCGGTGCT
GCCATACTTGAAATCCCCCATACATAGAAGCAAATGGGAGGTAAGTGCCCTCACAGAAGCGTAAAGAAGCGGAGATACTCGCACAAGACCGCTCGGCGCACGAAATTTCT
TGTCAAAGGCGATGATATGGTTTACGATGAGTTGACGAAATTCGAGGTGGAGAAGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCTTGC
ACTGCGATCGATACTTTGCGAATGTGTCTGTGAGGGATGAACATTTCAAGACCAAGCGTCACAGGAAGCGGGTAAAACTAATGACGGGTCCTGCACCTCACACGCAACTG
GATGCCGAGCTAGCTGCTGGGATGGGCATGCCTGATAACGGTCCAAAGCTTATGGCAATGTGAGCTTATTACTTATCATACAACTTAAGCATTTTTGGTGTTGTAAAGAG
CTTAGAGTGAGGTTAGTTTCTCGTTTAACTAACAAGATCGATTTTGTCATATACTATTACTGGTTGTGTATTTTATTTGCAGAGTTATTTTTATCACTTAATTTTAGCTT
CATATTTTACACCAACTTATAATTTGGTTGAGGCATATTCCTCCAATCAAGAAGTCAAATGTTCACATTTAGTGTTGAATTCAAAAAGACAATTGACTGTTATTATACAA
GTATGTCTACATATTTG
Protein sequenceShow/hide protein sequence
MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAAGMGMP
DNGPKLMAM