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Cla97C04G078310 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C04G078310
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionGTPase IMAP family member 1, putative
Genome locationCla97Chr04:25852123..25852590
RNA-Seq ExpressionCla97C04G078310
SyntenyCla97C04G078310
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]4.2e-2467.35Show/hide
Query:  GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIATAIPY
        G  R  E AAEMVEEWK+MI+  CVSSAIGIATVSV I+TELPN+FQ LS+ VLLCF  V F +M  SI F+ +SKILYCVGG L  ++ FIATAIPY
Subjt:  GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIATAIPY

KAE8652532.1 hypothetical protein Csa_023780, partial [Cucumis sativus]1.5e-0875.93Show/hide
Query:  LWESLKEE--------GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQI
        LWESLK E         GGRKL  AAEMVEEWKEMIVALCVSSA+GIATVSVQI
Subjt:  LWESLKEE--------GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQI

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3765Show/hide
Query:  WVGNWIRKACSLWESLKE--EGGG------RKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQR
        W  N I KA  LWE L++  EGGG          AAAEMVEEWK+MIVA CVSSAI IATVSVQIE +LP  F FLS+ +LLCFGFV FGKMTKSI  +R
Subjt:  WVGNWIRKACSLWESLKE--EGGG------RKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQR

Query:  VSKILYCVGGFLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSSTPL
        VS+ILYCVGG LGVTA FIA+AIPY+ YFQ IIFL+YLIF  + ML+    + SSSS PL
Subjt:  VSKILYCVGGFLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSSTPL

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1748.78Show/hide
Query:  EEGGGRKLE----AAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIAT
        EE G  + +    +A EM+ +W+ M+V  C+ +AI IATVSVQI+T+L   FQFLS  ++ CF F    K+   I  QRVS ILY +GGF  VTAFFIA 
Subjt:  EEGGGRKLE----AAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIAT

Query:  AIPYSPYFQFIIFLLYLIFCFVS
        AIPY+ +FQ +   LYL+F F++
Subjt:  AIPYSPYFQFIIFLLYLIFCFVS

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]1.2e-1559.77Show/hide
Query:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKIL
        ++W      G  R LE  AEMVEE KEMI+  C+SSAIGIATVSVQ +T+LPN+FQFLS+ VL+CF  VGF +M  SI F+ +SKIL
Subjt:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein2.7e-3259.57Show/hide
Query:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFF
        ++W      G  R LE  AEMVEE KEMI+  C+SSAIGIATVSVQ +T+LPN+FQFLS+ VL+CF  VGF +M  SI F+ +SKILYC GGFL  T  F
Subjt:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFF

Query:  IATAIPYSPYFQFIIFLLYLIFCFV-SMLITTTHNPSSSST
        IATAIPY  +F  I+ +LY IFC +  MLI+ THNPSS S+
Subjt:  IATAIPYSPYFQFIIFLLYLIFCFV-SMLITTTHNPSSSST

A0A0A0LEV1 Uncharacterized protein6.4e-1036.22Show/hide
Query:  LEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIATAIPYSPYFQFI
        +E  A+MVEE K  I+    +    IA +SVQ + +LP++F+F+S+  LLC        M    +F+  +K+LY +G F  +T++ IA AIP   YF  +
Subjt:  LEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIATAIPYSPYFQFI

Query:  IFLLYLIFCF-VSMLITTTHNPSSSST
        + LL+LI C  + +L++ T +P +S+T
Subjt:  IFLLYLIFCF-VSMLITTTHNPSSSST

A0A0A0LQB6 Uncharacterized protein1.7e-5576.88Show/hide
Query:  CWVGNWIRKACSLWESLKEE--------GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIET--ELPNTFQFLSVVVLLCFGFVGFGKMTKSIN
        CWVG+ IRKAC LWESLK E         GGRKL   AEMVEEWKEMIVALCVSSAIGIATVSVQIET  +LP TFQFLS+VVLLCFGFVGF KMTK I 
Subjt:  CWVGNWIRKACSLWESLKEE--------GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIET--ELPNTFQFLSVVVLLCFGFVGFGKMTKSIN

Query:  FQRVSKILYCVGGFLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSS
        F+ VSKILYCVGGFLGVTAFFIATAIP++PYFQ IIF+LYL+FCF+ MLITT HN   SS
Subjt:  FQRVSKILYCVGGFLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSS

A0A0A0LQP5 Uncharacterized protein7.8e-2450.32Show/hide
Query:  VGNWIRKACSLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVG
        VG W R+           G  R LE  AE VEE KE I+ LCVSSAIGI T SVQI+T+LPN+FQ LS+ +LLCF  V F +M +S+ F+ +S+ILYCVG
Subjt:  VGNWIRKACSLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVG

Query:  GFLGVTAFFIATAIPY-SPYFQFIIFLLYLIFCFVSML----ITTTHN-PSSSST
         F+  T  FIATAI Y   +F  I+ +LY IFC + ++    I+ THN PSS S+
Subjt:  GFLGVTAFFIATAIPY-SPYFQFIIFLLYLIFCFVSML----ITTTHN-PSSSST

A0A0A0LSX4 Uncharacterized protein5.4e-2561.26Show/hide
Query:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFF
        ++W      G  R  E AAEMVEEWK+MI+  CVSSAIGIATVSV I+TELPN+FQ LS+ VLLCF  V F +M  SI F+ +SKILYCVGG L  ++ F
Subjt:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFF

Query:  IATAIPYSPYF
        IATAIPY+  F
Subjt:  IATAIPYSPYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTTGGGTTGGAAATTGGATTAGGAAGGCATGTAGTTTATGGGAATCATTAAAGGAAGAAGGCGGTGGCCGGAAACTGGAGGCGGCGGCGGAGATGGTGGAGGA
ATGGAAGGAAATGATAGTAGCATTGTGTGTGTCATCGGCAATAGGGATAGCAACAGTGTCTGTTCAAATAGAAACAGAACTCCCAAATACATTTCAGTTTCTATCGGTTG
TTGTGTTGTTGTGTTTTGGATTTGTGGGTTTTGGAAAAATGACCAAATCCATTAATTTCCAAAGAGTTTCAAAGATTTTATACTGTGTGGGAGGATTTTTGGGGGTGACA
GCCTTTTTCATAGCCACTGCCATTCCATATTCCCCATATTTTCAGTTCATCATTTTCCTCCTTTACTTGATCTTTTGCTTCGTTTCCATGCTAATCACCACCACCCACAA
CCCTTCTTCTTCCTCCACTCCCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTTGGGTTGGAAATTGGATTAGGAAGGCATGTAGTTTATGGGAATCATTAAAGGAAGAAGGCGGTGGCCGGAAACTGGAGGCGGCGGCGGAGATGGTGGAGGA
ATGGAAGGAAATGATAGTAGCATTGTGTGTGTCATCGGCAATAGGGATAGCAACAGTGTCTGTTCAAATAGAAACAGAACTCCCAAATACATTTCAGTTTCTATCGGTTG
TTGTGTTGTTGTGTTTTGGATTTGTGGGTTTTGGAAAAATGACCAAATCCATTAATTTCCAAAGAGTTTCAAAGATTTTATACTGTGTGGGAGGATTTTTGGGGGTGACA
GCCTTTTTCATAGCCACTGCCATTCCATATTCCCCATATTTTCAGTTCATCATTTTCCTCCTTTACTTGATCTTTTGCTTCGTTTCCATGCTAATCACCACCACCCACAA
CCCTTCTTCTTCCTCCACTCCCCTTTGA
Protein sequenceShow/hide protein sequence
MGCWVGNWIRKACSLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSVVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVT
AFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSSTPL