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Cla97C05G092760 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C05G092760
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionPathogenesis-related homeodomain protein
Genome locationCla97Chr05:10880237..10881083
RNA-Seq ExpressionCla97C05G092760
SyntenyCla97C05G092760
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037199.1 pathogenesis-related homeodomain protein [Cucumis melo var. makuwa]5.8e-0877.27Show/hide
Query:  RAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMD
        RAIF+FCK CQLE PWE SQANRT ELQLPFGL S   DRSLM+
Subjt:  RAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMD
TYK13874.1 pathogenesis-related homeodomain protein [Cucumis melo var. makuwa]5.8e-0877.27Show/hide
Query:  RAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMD
        RAIF+FCK CQLE PWE SQANRT ELQLPFGL S   DRSLM+
Subjt:  RAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMD
TrEMBL top hitse value%identityAlignment
A0A5A7T752 Pathogenesis-related homeodomain protein2.8e-0877.27Show/hide
Query:  RAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMD
        RAIF+FCK CQLE PWE SQANRT ELQLPFGL S   DRSLM+
Subjt:  RAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMD
A0A5D3CS50 Pathogenesis-related homeodomain protein2.8e-0877.27Show/hide
Query:  RAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMD
        RAIF+FCK CQLE PWE SQANRT ELQLPFGL S   DRSLM+
Subjt:  RAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTATTCGGCTATTTACCCTCTTCCAAGAAACACACAAGGTCAGATGCTGGCATTGTTTGAAGGGAGGGCCATCTTTGAATTTTGCAAGCTATGCCAACTTGA
ACACCCCTGGGAAAGAAGCCAGGCAAATAGAACTAGAGAGCTACAGCTACCCTTCGGCCTCGGAAGCTTTGCTGCAGATAGATCACTTATGGATGCAACATCGCTCTCAA
GTTCTGCAAAATCGAAATTTGGATCCTACTTTTATCAAATTGAACGAGTAAAAATGCTGTCAGCAAGTCAAATTGGTATCAAATCCTCCTCCATGCTGATGGAGCTTACT
TCCAAGATTTCTGGATGTTTTCATCTTCTGAACACTGGAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTATTCGGCTATTTACCCTCTTCCAAGAAACACACAAGGTCAGATGCTGGCATTGTTTGAAGGGAGGGCCATCTTTGAATTTTGCAAGCTATGCCAACTTGA
ACACCCCTGGGAAAGAAGCCAGGCAAATAGAACTAGAGAGCTACAGCTACCCTTCGGCCTCGGAAGCTTTGCTGCAGATAGATCACTTATGGATGCAACATCGCTCTCAA
GTTCTGCAAAATCGAAATTTGGATCCTACTTTTATCAAATTGAACGAGTAAAAATGCTGTCAGCAAGTCAAATTGGTATCAAATCCTCCTCCATGCTGATGGAGCTTACT
TCCAAGATTTCTGGATGTTTTCATCTTCTGAACACTGGAAGGTGA
Protein sequenceShow/hide protein sequence
MGNYSAIYPLPRNTQGQMLALFEGRAIFEFCKLCQLEHPWERSQANRTRELQLPFGLGSFAADRSLMDATSLSSSAKSKFGSYFYQIERVKMLSASQIGIKSSSMLMELT
SKISGCFHLLNTGR