; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C06G111480 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C06G111480
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Genome locationCla97Chr06:2246402..2248635
RNA-Seq ExpressionCla97C06G111480
SyntenyCla97C06G111480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014655.1 hypothetical protein SDJN02_24834, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-5683.33Show/hide
Query:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVV
        MSRP++ PQSG  +EISSLLLKILRSPPPPVPF+DHVLELSSAISSSS   PSSQ++P GFAALLLGISLALMLCGSVTFFLGFMLMPWILV VMI Y+V
Subjt:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVV

Query:  GIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSCLLVFIGFDF
        GIVS++SMLGRS+LCCFTAPTPRKDFHGEFLF  C LVFI F F
Subjt:  GIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSCLLVFIGFDF

XP_004151234.1 uncharacterized protein LOC101208751 [Cucumis sativus]4.1e-5391.47Show/hide
Query:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV
        M   R+ P+SGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI SSSSRILPSSQ+TPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMI YV
Subjt:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV

Query:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG
        VGIVS+LSMLGRSL+CCFTAPTPRKDFHG
Subjt:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG

XP_008459845.1 PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo]1.7e-5188.37Show/hide
Query:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV
        M+  ++ P+SGVF+EISSLLLKILRSPPPPVPFSDHVLELSS I SSSSRILPSSQ+TPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMI YV
Subjt:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV

Query:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG
        VGIVS+LS+LGRSL+CCFTAPTPRKDFHG
Subjt:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG

XP_022155438.1 uncharacterized protein LOC111022584 isoform X1 [Momordica charantia]3.0e-5183.09Show/hide
Query:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV
        +M RPRE PQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPAG A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMI YV
Subjt:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV

Query:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSC
        VGIVS+LSMLGRS+LCCF+APTPRKDF+ +F F  C
Subjt:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSC

XP_038875874.1 uncharacterized protein LOC120068233 [Benincasa hispida]8.9e-5692.97Show/hide
Query:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVV
        M+RP++HPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSS ILPSSQ+TPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILV VMI YV 
Subjt:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVV

Query:  GIVSTLSMLGRSLLCCFTAPTPRKDFHG
        GIVS+LSMLGRSLLCCFTAPTPRKDFHG
Subjt:  GIVSTLSMLGRSLLCCFTAPTPRKDFHG

TrEMBL top hitse value%identityAlignment
A0A0A0KDL5 Uncharacterized protein2.0e-5391.47Show/hide
Query:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV
        M   R+ P+SGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI SSSSRILPSSQ+TPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMI YV
Subjt:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV

Query:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG
        VGIVS+LSMLGRSL+CCFTAPTPRKDFHG
Subjt:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG

A0A1S3CB48 uncharacterized protein LOC1034988458.4e-5288.37Show/hide
Query:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV
        M+  ++ P+SGVF+EISSLLLKILRSPPPPVPFSDHVLELSS I SSSSRILPSSQ+TPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMI YV
Subjt:  MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV

Query:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG
        VGIVS+LS+LGRSL+CCFTAPTPRKDFHG
Subjt:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG

A0A6J1DMF9 uncharacterized protein LOC111022584 isoform X21.2e-5080.28Show/hide
Query:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV
        +M RPRE PQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPAG A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMI YV
Subjt:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV

Query:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSCLLVFIG
        VGIVS+LSMLGRS+LCCF+APTPRKDF+ E     C+  F G
Subjt:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSCLLVFIG

A0A6J1DMY8 uncharacterized protein LOC111022584 isoform X11.4e-5183.09Show/hide
Query:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV
        +M RPRE PQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPAG A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMI YV
Subjt:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV

Query:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSC
        VGIVS+LSMLGRS+LCCF+APTPRKDF+ +F F  C
Subjt:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSC

A0A6J1DPD1 uncharacterized protein LOC111022584 isoform X43.2e-5186.05Show/hide
Query:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV
        +M RPRE PQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPAG A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMI YV
Subjt:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYV

Query:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG
        VGIVS+LSMLGRS+LCCF+APTPRKDF+G
Subjt:  VGIVSTLSMLGRSLLCCFTAPTPRKDFHG

SwissProt top hitse value%identityAlignment
Q09X08 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic2.4e-2796.72Show/hide
Query:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK
        MSSSDRIELLIDPGTWDPMDEDMVSLDPIEF+SEEEPYKDRIDSYQRKTGLTEA+QTGTGK
Subjt:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK

Q2MI91 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic5.3e-2795.08Show/hide
Query:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK
        MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEA+QTG G+
Subjt:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK

Q2MIH8 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic5.3e-2795.08Show/hide
Query:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK
        MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEA+QTG G+
Subjt:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK

Q33C25 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic5.3e-2795.08Show/hide
Query:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK
        MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEA+QTG G+
Subjt:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK

Q3C1J3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic5.3e-2795.08Show/hide
Query:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK
        MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEA+QTG G+
Subjt:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK

Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein4.5e-2954.96Show/hide
Query:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAIS---SSSRILPSS----QITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILV
        +M R R+  QS VFY++SSL+L +LRSPP P+   DH  +  + I    SS R   SS     I+P+GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L 
Subjt:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAIS---SSSRILPSS----QITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILV

Query:  LVMICYVVGIVSTLSMLGRSLLC-CFTAPTP
        L+++ YV GIVS +SM+GRS+LC   T P+P
Subjt:  LVMICYVVGIVSTLSMLGRSLLC-CFTAPTP

AT1G27290.2 unknown protein4.5e-2954.96Show/hide
Query:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAIS---SSSRILPSS----QITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILV
        +M R R+  QS VFY++SSL+L +LRSPP P+   DH  +  + I    SS R   SS     I+P+GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L 
Subjt:  VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAIS---SSSRILPSS----QITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILV

Query:  LVMICYVVGIVSTLSMLGRSLLC-CFTAPTP
        L+++ YV GIVS +SM+GRS+LC   T P+P
Subjt:  LVMICYVVGIVSTLSMLGRSLLC-CFTAPTP

ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta1.4e-2278.69Show/hide
Query:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK
        MSSS+RIEL IDPGTW+PMDEDMVS DPI+FHS+EEPYK+RIDS Q+ TGLT+A+QTGTG+
Subjt:  MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTTCAGATAGAATCGAACTTTTGATTGATCCGGGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACC
TTATAAAGATCGTATTGATTCTTATCAAAGAAAGACAGGATTAACTGAGGCTATTCAAACAGGCACAGGCAAGGAACAAAGGAGGGAGTATGGAGGAAAATTTTCCCATG
GGATTTTTCCCCAATTCATCCATTCCCCTCGCTGGAGGTCTTTTCATTTTGATTTTGCTTTCTTCGTTGTGGGTTTTTTGGTTGTGATGAGTAGGCCTCGAGAACATCCC
CAATCTGGGGTTTTTTATGAGATTTCGTCTCTGCTTTTGAAAATTCTACGATCGCCACCTCCTCCGGTGCCTTTTTCCGATCATGTTCTGGAATTATCTTCAGCTATTTC
GTCTTCGTCGAGGATTTTGCCTTCCTCTCAGATTACCCCAGCTGGATTTGCGGCGTTGCTTTTGGGGATTTCGTTGGCTTTAATGCTTTGTGGATCGGTTACTTTCTTCC
TTGGTTTCATGTTGATGCCTTGGATTCTCGTTTTGGTGATGATTTGTTATGTGGTTGGGATCGTCTCTACCCTCTCTATGTTGGGACGCTCTTTACTTTGTTGTTTCACC
GCTCCAACGCCTCGGAAAGATTTTCATGGCGAGTTTCTTTTCTCGTCCTGTCTCCTTGTTTTTATTGGATTTGATTTTTTGCTTCATTTCCTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTTCAGATAGAATCGAACTTTTGATTGATCCGGGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACC
TTATAAAGATCGTATTGATTCTTATCAAAGAAAGACAGGATTAACTGAGGCTATTCAAACAGGCACAGGCAAGGAACAAAGGAGGGAGTATGGAGGAAAATTTTCCCATG
GGATTTTTCCCCAATTCATCCATTCCCCTCGCTGGAGGTCTTTTCATTTTGATTTTGCTTTCTTCGTTGTGGGTTTTTTGGTTGTGATGAGTAGGCCTCGAGAACATCCC
CAATCTGGGGTTTTTTATGAGATTTCGTCTCTGCTTTTGAAAATTCTACGATCGCCACCTCCTCCGGTGCCTTTTTCCGATCATGTTCTGGAATTATCTTCAGCTATTTC
GTCTTCGTCGAGGATTTTGCCTTCCTCTCAGATTACCCCAGCTGGATTTGCGGCGTTGCTTTTGGGGATTTCGTTGGCTTTAATGCTTTGTGGATCGGTTACTTTCTTCC
TTGGTTTCATGTTGATGCCTTGGATTCTCGTTTTGGTGATGATTTGTTATGTGGTTGGGATCGTCTCTACCCTCTCTATGTTGGGACGCTCTTTACTTTGTTGTTTCACC
GCTCCAACGCCTCGGAAAGATTTTCATGGCGAGTTTCTTTTCTCGTCCTGTCTCCTTGTTTTTATTGGATTTGATTTTTTGCTTCATTTCCTTATCTGA
Protein sequenceShow/hide protein sequence
MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGKEQRREYGGKFSHGIFPQFIHSPRWRSFHFDFAFFVVGFLVVMSRPREHP
QSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFT
APTPRKDFHGEFLFSSCLLVFIGFDFLLHFLI