CuGenDBv2

Gene ID	Cla97C06G112940
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Protein Ycf2
Genome location	Cla97Chr06:3998305..3999191
RNA-Seq Expression	Cla97C06G112940
Synteny	Cla97C06G112940
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QIT04093.1 Ycf2 protein [Luffa aegyptiaca]

3.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

QJR53001.1 hypothetical protein RF2 [Herpetospermum pedunculosum]

3.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

YP_009752033.1 Ycf2 protein [Cionosicys macranthus]

3.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

YP_009752370.1 Ycf2 protein [Bryonia marmorata]

3.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]

3.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

TrEMBL top hits

e value

%identity

Alignment

A0A343F2F1 Protein Ycf2

1.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

A0A410HFC5 Protein Ycf2

1.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

A0A6H0ESM3 Protein Ycf2

1.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

A0A6H0ET42 Protein Ycf2

1.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

A0A6M3RUH1 Protein Ycf2

1.9e-28

100

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

SwissProt top hits

e value

%identity

Alignment

A0ZZ78 Protein Ycf2

2.8e-29

95.24

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSAGSV QDLWSLPGPDEKNGITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

B1A978 Protein Ycf2

2.8e-29

95.24

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSAGSV QDLWSLPGPDEKNGITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

P08973 Protein Ycf2

9.6e-30

96.83

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSAGSV QDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

Q0ZIV6 Protein Ycf2

9.6e-30

96.83

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSAGSV QDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

Q2L949 Protein Ycf2

2.8e-29

95.24

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSAGSV QDLWSLPGPDEKNGITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

5.4e-28

90.48

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKK TILLYLLSCSAGSV QDLWSLP PDEKN ITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

5.4e-28

90.48

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKK TILLYLLSCSAGSV QDLWSLP PDEKN ITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGAAGAAATCATGTAACGAAGGGGGTTCTTATTTGTACAAATGGTACTTTGAACTTGGAACGAGCATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTC
TGCCGGATCGGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTGACAGTTAAGAGTAATGCTCTAAGAGTGAGTT
AA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVTVKSNALRVS

Cla97C06G112940 (gene) of Watermelon (97103) v2.5 genome