; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C08G147160 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C08G147160
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptiontranscription factor IBH1
Genome locationCla97Chr08:9819164..9824057
RNA-Seq ExpressionCla97C08G147160
SyntenyCla97C08G147160
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575326.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3567.38Show/hide
Query:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-----TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS
        MASKSG T + STSS LRLARTFLRSF+ IKSQ      S P L+R+SRRIKM AYSSMAR AGPR AWARALLFKL TR  HRTL+       T     
Subjt:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-----TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS

Query:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
         RSD++VGKLRRL+PGG+ MDVCTLLEET  YI CLS QVK
Subjt:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

KAG7025295.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3869.23Show/hide
Query:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTP
        MAS+SG T MNS+SS LRLARTFLRSFS+IKS+        S+  L+R+SRRIK+AAYSSMARVAGP+RAWARALLFKL+TR  H TLM        +T 
Subjt:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTP

Query:  PSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
        PS+  D+ VGKLRRLLPGGD MDVCTLLEETA+YIHCLS QVK
Subjt:  PSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

XP_008464343.1 PREDICTED: transcription factor IBH1 [Cucumis melo]1.4e-4173.05Show/hide
Query:  SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS
        SKS ITL+NSTSSR R ARTFLR FS+IKSQ S+         LKRQS+RIKM AYSSMARVAGPRRAWARALLFKL TRP HRTLM           PS
Subjt:  SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS

Query:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
        +  D+QVGKLRRLLPGG+ MDVCTLLEETANYIHCLSTQVK
Subjt:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

XP_023005092.1 transcription factor IBH1 [Cucurbita maxima]1.6e-3767.83Show/hide
Query:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTP
        MA +SGIT MNS+SS LRLARTFLRSFS+IKS+        S+  L+R+SRRIK+AAYSSMARVAGP+R WARALLFKL+TR  HRT M        +T 
Subjt:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTP

Query:  PSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
        PS+  D+ VGKLRRL+PGGD MDVCTLLEETA+YIHCLS QVK
Subjt:  PSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

XP_023548405.1 transcription factor IBH1 [Cucurbita pepo subsp. pepo]9.9e-3566.67Show/hide
Query:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-----TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS
        MASKSG T + STS+ LRLARTFLRSF+ IKSQ      S P LKRQSRRIKM AYSSMAR AGPR AWARALLFKL  R  HRTL+       T     
Subjt:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-----TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS

Query:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
          SD++VGKLRRL+PGG+RMDVC+LLEET  YI CL TQVK
Subjt:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ3 Uncharacterized protein3.3e-3670.15Show/hide
Query:  SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPSSRSDNQV
        SKS ITL+NSTSSRL  ART     S   +      LKRQSRRIKMAAYSSMARVAG RRAWARALLF+LHTRP H+TLM           PS+ SD+ V
Subjt:  SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPSSRSDNQV

Query:  GKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
        GKLRRLLPGG+ MDVCTLLEETANYIHCLSTQVK
Subjt:  GKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

A0A1S3CLD3 transcription factor IBH16.9e-4273.05Show/hide
Query:  SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS
        SKS ITL+NSTSSR R ARTFLR FS+IKSQ S+         LKRQS+RIKM AYSSMARVAGPRRAWARALLFKL TRP HRTLM           PS
Subjt:  SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS

Query:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
        +  D+QVGKLRRLLPGG+ MDVCTLLEETANYIHCLSTQVK
Subjt:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

A0A2N9I4P0 Uncharacterized protein4.6e-2246Show/hide
Query:  GITLMNSTSSRLRLARTFLRSFSKIK----SQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTH---------------RTLMNTPP
        G+TL N+ S R++ AR F+R+ SK+K    S +S   ++++S+RIK+AAYSSMA   G ++AW+RA+LFKL  R  H               R + N PP
Subjt:  GITLMNSTSSRLRLARTFLRSFSKIK----SQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTH---------------RTLMNTPP

Query:  GASTTTPPSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
        G            NQ  KLR+L+PGG  MD+C+LLEETA+YI CLSTQVK
Subjt:  GASTTTPPSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

A0A5D3BPL2 Transcription factor IBH16.9e-4273.05Show/hide
Query:  SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS
        SKS ITL+NSTSSR R ARTFLR FS+IKSQ S+         LKRQS+RIKM AYSSMARVAGPRRAWARALLFKL TRP HRTLM           PS
Subjt:  SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPS

Query:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
        +  D+QVGKLRRLLPGG+ MDVCTLLEETANYIHCLSTQVK
Subjt:  SRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

A0A6J1KS83 transcription factor IBH17.9e-3867.83Show/hide
Query:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTP
        MA +SGIT MNS+SS LRLARTFLRSFS+IKS+        S+  L+R+SRRIK+AAYSSMARVAGP+R WARALLFKL+TR  HRT M        +T 
Subjt:  MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTP

Query:  PSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
        PS+  D+ VGKLRRL+PGGD MDVCTLLEETA+YIHCLS QVK
Subjt:  PSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

SwissProt top hitse value%identityAlignment
Q01I07 Transcription factor IBH12.3e-1035.44Show/hide
Query:  STSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLM-----------------------------
        + +++  LA  FLR+ S+I   T    + R++R I+ AAYSSMAR A PRRAW+RALL +   R + RTLM                             
Subjt:  STSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLM-----------------------------

Query:  -NTPPGASTTTPPSSRSDNQ---VGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
              A+   PP  R   +      LRRL+PGG  M+  +LLEETA+Y+  L  QV+
Subjt:  -NTPPGASTTTPPSSRSDNQ---VGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

Q7XR02 Transcription factor IBH11.3e-1035.44Show/hide
Query:  STSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLM-----------------------------
        + +++  LA  FLR+ S+I   T    + R++R I+ AAYSSMAR A PRRAW+RALL ++  R + RTLM                             
Subjt:  STSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLM-----------------------------

Query:  -NTPPGASTTTPPSSRSDNQVGK---LRRLLPGGDRMDVCTLLEETANYIHCLSTQVK
              A+   PP  R   +  +   LRRL+PGG  M+  +LLEETA+Y+  L  QV+
Subjt:  -NTPPGASTTTPPSSRSDNQVGK---LRRLLPGGDRMDVCTLLEETANYIHCLSTQVK

Q9SKX1 Transcription factor IBH13.1e-0738.4Show/hide
Query:  FLRSFSKIKSQT--SSPHLKR-QSRRIKMAAYSSMARVA-GPRRAWARALL-------FKLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPG
        FL+S S ++ Q    +P  K  + R+IK AAY SMAR A G  R W+RALL        K+      +  +++    S    P    +    +LR L+PG
Subjt:  FLRSFSKIKSQT--SSPHLKR-QSRRIKMAAYSSMARVA-GPRRAWARALL-------FKLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPG

Query:  GDRMDVCTLLEETANYIHCLSTQVK
        G  M+   L+EETA+YI CLS QVK
Subjt:  GDRMDVCTLLEETANYIHCLSTQVK

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 12.2e-0838.4Show/hide
Query:  FLRSFSKIKSQT--SSPHLKR-QSRRIKMAAYSSMARVA-GPRRAWARALL-------FKLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPG
        FL+S S ++ Q    +P  K  + R+IK AAY SMAR A G  R W+RALL        K+      +  +++    S    P    +    +LR L+PG
Subjt:  FLRSFSKIKSQT--SSPHLKR-QSRRIKMAAYSSMARVA-GPRRAWARALL-------FKLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPG

Query:  GDRMDVCTLLEETANYIHCLSTQVK
        G  M+   L+EETA+YI CLS QVK
Subjt:  GDRMDVCTLLEETANYIHCLSTQVK

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators1.5e-0437.04Show/hide
Query:  AWARALLFKL--HTRPTHRTLMNTPPGASTTTPPSSRSDNQVG-------KLRRLLPGGDRMDVCTLLEETANYIHCLSTQ
        AW+R LL KL   + PT  T  ++  G      P     N+ G       +L++LLPGG+ M+V  +L E  NYI CL  Q
Subjt:  AWARALLFKL--HTRPTHRTLMNTPPGASTTTPPSSRSDNQVG-------KLRRLLPGGDRMDVCTLLEETANYIHCLSTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTAAATCAGGTATAACCCTAATGAATTCAACCTCGTCCCGCCTCCGTCTCGCTCGAACCTTCCTCCGATCCTTCTCCAAAATCAAATCCCAAACCTCATCTCC
ACACCTCAAACGCCAGAGCCGACGGATAAAGATGGCTGCATACTCCTCCATGGCTCGCGTCGCCGGCCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTTCAAGCTCCACA
CGCGACCTACACACAGGACTCTAATGAATACACCCCCTGGTGCCTCCACGACCACACCACCCTCCTCTCGCTCCGACAACCAAGTCGGGAAGCTCCGCCGCCTGCTCCCC
GGTGGCGATAGGATGGACGTTTGCACCTTGCTGGAGGAAACTGCTAATTACATCCATTGCTTGTCCACACAAGTTAAGCCTTCCTCTCCAGCTCCTCGATGGTCAAACTC
TATCTCTCTCCCGCGATCGGAAAGTTCTCTGCCGCTAGCCATACGTCGCGCCTCACGCCGCAGCCGCACGAACCGCCATCGGGACTCATCGCCGACAGTCGCGTTGCCGG
ATCTCGTCGCCCCAGCCGGTCCCTATCCATCAGATGCATCGGTTGCCGACCGTCCGCGTGCCGTCGACTGGTCGTCGGTCGTCCAAAGCCTCGCACCGCTGTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTAAATCAGGTATAACCCTAATGAATTCAACCTCGTCCCGCCTCCGTCTCGCTCGAACCTTCCTCCGATCCTTCTCCAAAATCAAATCCCAAACCTCATCTCC
ACACCTCAAACGCCAGAGCCGACGGATAAAGATGGCTGCATACTCCTCCATGGCTCGCGTCGCCGGCCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTTCAAGCTCCACA
CGCGACCTACACACAGGACTCTAATGAATACACCCCCTGGTGCCTCCACGACCACACCACCCTCCTCTCGCTCCGACAACCAAGTCGGGAAGCTCCGCCGCCTGCTCCCC
GGTGGCGATAGGATGGACGTTTGCACCTTGCTGGAGGAAACTGCTAATTACATCCATTGCTTGTCCACACAAGTTAAGCCTTCCTCTCCAGCTCCTCGATGGTCAAACTC
TATCTCTCTCCCGCGATCGGAAAGTTCTCTGCCGCTAGCCATACGTCGCGCCTCACGCCGCAGCCGCACGAACCGCCATCGGGACTCATCGCCGACAGTCGCGTTGCCGG
ATCTCGTCGCCCCAGCCGGTCCCTATCCATCAGATGCATCGGTTGCCGACCGTCCGCGTGCCGTCGACTGGTCGTCGGTCGTCCAAAGCCTCGCACCGCTGTTTGATTGA
Protein sequenceShow/hide protein sequence
MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLP
GGDRMDVCTLLEETANYIHCLSTQVKPSSPAPRWSNSISLPRSESSLPLAIRRASRRSRTNRHRDSSPTVALPDLVAPAGPYPSDASVADRPRAVDWSSVVQSLAPLFD