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Cla97C08G147337 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C08G147337
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionChromo domain-containing protein
Genome locationCla97Chr08:11749260..11749715
RNA-Seq ExpressionCla97C08G147337
SyntenyCla97C08G147337
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006479 - protein methylation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008276 - protein methyltransferase activity (molecular function)
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEY98968.1 hypothetical protein [Tanacetum cinerariifolium]2.4e-1444.33Show/hide
Query:  LKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE------------------------INISGGGCHVP
        LKP+H++EEDPER +SKRAPT VVT +D++V+ IL+ R   R+GVPS  E+L+KW+ LP++E                         ++ GGGCHVP
Subjt:  LKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE------------------------INISGGGCHVP

KAA0041285.1 uncharacterized protein E6C27_scaffold128G002770 [Cucumis melo var. makuwa]1.6e-1358.73Show/hide
Query:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE
        MLKPFH+++EDP R+ + RAPTGVVTE D+++K ILA R+  R+GVPS  E+L+ W+GLP +E
Subjt:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE

KAA0042139.1 uncharacterized protein E6C27_scaffold67G006280 [Cucumis melo var. makuwa]2.0e-1358.73Show/hide
Query:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE
        MLKPFH+++EDP R+ + RAPTGVVTE D+++K ILA R+  R+GVPS  E+L+ W+GLP +E
Subjt:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE

KAA0050130.1 uncharacterized protein E6C27_scaffold675G001500 [Cucumis melo var. makuwa]2.0e-1357.14Show/hide
Query:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE
        MLKPFH+++EDP R+ + RAPTGV+TE D+++K ILA R+  R+GVPS  E+L+ W+GLP +E
Subjt:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE

RVW19715.1 hypothetical protein CK203_113928 [Vitis vinifera]9.2e-1446.51Show/hide
Query:  LKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTEINISGGGCH--VPKSPSKFRIDEA
        LKP+H++++DP R +SKRAPT VVT +DK+V+ I+A R   R+GVP   E+LVKW+GLP +E +      +  VP +  +FR ++A
Subjt:  LKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTEINISGGGCH--VPKSPSKFRIDEA

TrEMBL top hitse value%identityAlignment
A0A438C8Y4 Chromo domain-containing protein4.5e-1446.51Show/hide
Query:  LKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTEINISGGGCH--VPKSPSKFRIDEA
        LKP+H++++DP R +SKRAPT VVT +DK+V+ I+A R   R+GVP   E+LVKW+GLP +E +      +  VP +  +FR ++A
Subjt:  LKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTEINISGGGCH--VPKSPSKFRIDEA

A0A5A7U4C8 Uncharacterized protein9.9e-1457.14Show/hide
Query:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE
        MLKPFH+++EDP R+ + RAPTGV+TE D+++K ILA R+  R+GVPS  E+L+ W+GLP +E
Subjt:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE

A0A5A7VEX8 Polyprotein1.7e-1357.14Show/hide
Query:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE
        MLKPFH++ EDP R+ + RAPTGV+TE D+++K ILA R+  R+GVPS  E+L+ W+GLP +E
Subjt:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE

A0A5D3BX70 Chromo domain-containing protein7.6e-1458.73Show/hide
Query:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE
        MLKPFH+++EDP R+ + RAPTGVVTE D+++K ILA R+  R+GVPS  E+L+ W+GLP +E
Subjt:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE

A0A5D3D359 Uncharacterized protein9.9e-1458.73Show/hide
Query:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE
        MLKPFH+++EDP R+ + RAPTGVVTE D+++K ILA R+  R+GVPS  E+L+ W+GLP +E
Subjt:  MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGCCTTTTCATCAAAACGAGGAAGACCCTGAAAGAGCCATCTCCAAGAGAGCCCCAACAGGGGTTGTGACTGAACATGACAAACAGGTTAAGGCCATCTTGGC
ACACAGGAGGGCAAGCAGACAAGGAGTCCCAAGTCGCATAGAATTTCTAGTGAAATGGCAGGGACTCCCCAACACCGAGATCAACATAAGTGGGGGAGGGTGTCACGTGC
CAAAATCGCCCTCCAAATTTCGCATTGATGAGGCGCAAGTCCCCCTAGCAAAGCCAAGAGGGGACCGCAACATTGGCAATCGCAGCCCACCAAGAGACTCTGTGCGGGTG
CTGTGCCCCACTGGCCCGCACAGCACCATGCATTCAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGCCTTTTCATCAAAACGAGGAAGACCCTGAAAGAGCCATCTCCAAGAGAGCCCCAACAGGGGTTGTGACTGAACATGACAAACAGGTTAAGGCCATCTTGGC
ACACAGGAGGGCAAGCAGACAAGGAGTCCCAAGTCGCATAGAATTTCTAGTGAAATGGCAGGGACTCCCCAACACCGAGATCAACATAAGTGGGGGAGGGTGTCACGTGC
CAAAATCGCCCTCCAAATTTCGCATTGATGAGGCGCAAGTCCCCCTAGCAAAGCCAAGAGGGGACCGCAACATTGGCAATCGCAGCCCACCAAGAGACTCTGTGCGGGTG
CTGTGCCCCACTGGCCCGCACAGCACCATGCATTCAACGTGA
Protein sequenceShow/hide protein sequence
MLKPFHQNEEDPERAISKRAPTGVVTEHDKQVKAILAHRRASRQGVPSRIEFLVKWQGLPNTEINISGGGCHVPKSPSKFRIDEAQVPLAKPRGDRNIGNRSPPRDSVRV
LCPTGPHSTMHST