; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C09G183185 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C09G183185
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCla97Chr09:36443249..36448967
RNA-Seq ExpressionCla97C09G183185
SyntenyCla97C09G183185
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45331.2 hypothetical protein Csa_015776 [Cucumis sativus]7.1e-9653.02Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------
        +LINGYCKT KVEEAM LYNEM QVGKRP+  TYG LLTGLFQ  +VG        +K+YGI  DSCIY IFLDGL KN                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------

Query:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GKLET WELFE L Q+G+Q DVV +NIMIH FCK GQ+          EENGCTPDIITYNTLL GF +SNK  EVV LLH+M+Q+
Subjt:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR------------------------------------SYM-TCK---ITETEGLHFFDLMTRSNPTPPIS
        D+SP+AI+C IV+DML KDE+YQECLDLLPR                                    S++  CK   I   +  HFFDLM RS P P IS
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR------------------------------------SYM-TCK---ITETEGLHFFDLMTRSNPTPPIS

Query:  SFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQKL
        SFN LLGGL ++N       +  KM LAGL P L TLNIL + LCN+NRV EGL AM GILR  YIPD VTY TLIKGLC   RI+ A  LF+RMQKL
Subjt:  SFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQKL

XP_011659273.2 pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sativus]7.4e-6156.96Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSKN----------------------
        LINGYCKTWKV+EAM LYNEM QVGKRP+V TYG LL GLFQ  +V       G +K+YG+  +S IYGIFLDGL KN                      
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSKN----------------------

Query:  -------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD
                     GKLET WELFE LSQ+G+Q DVV +NIMIH FCK GQ+          EENGCTPDII YNTLL GF + NKL EV+ LLH+MVQKD
Subjt:  -------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD

Query:  VSPNAITCTIVVDMLSKDEEYQECLDLLPR
        VSPNA +CTIVVDML KDE+Y++ +DLLP+
Subjt:  VSPNAITCTIVVDMLSKDEEYQECLDLLPR

XP_015876665.2 pentatricopeptide repeat-containing protein At5g65560-like [Ziziphus jujuba]8.8e-7035.01Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLD---------------------------
        LINGYCK WK +E M L+ EM   G RPSV TY ALLTGLFQ  +V         ++  G+  +S  Y IFLD                           
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLD---------------------------

Query:  --------GLSKNGKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD
                GL K+ KLE   ELF  L   G+  DVV +NI+I+  CKE           ++EE GC PDI+TYNTL+ GF +++K + VV LL +M +K+
Subjt:  --------GLSKNGKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD

Query:  VSPNAITCTIVVDMLSKDEEYQECLDLLP-----------------------------------------------------------------------
        V P+A T +IV+D+LS D+ Y+ECL+LLP                                                                       
Subjt:  VSPNAITCTIVVDMLSKDEEYQECLDLLP-----------------------------------------------------------------------

Query:  --------------------RSYMT------CK---ITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILI
                            R+ +T      CK    T TE L +FD M    P P +SSFN LLG L +       L++  +M L GLLP  +TLN+LI
Subjt:  --------------------RSYMT------CK---ITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILI

Query:  DWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINC
        +  CNVNR+ +G V +  ++R  Y P+ VTYT+L+KGLC E RI EA KLF +M K            L+KGL  T N +IA+KLH+ + +  S YG+ C
Subjt:  DWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINC

Query:  KPNDICYSIIIDGLCKD
        +PN + Y  II GLCK+
Subjt:  KPNDICYSIIIDGLCKD

XP_038896203.1 pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida]1.5e-6157.83Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSKN----------------------
        LINGYCKT KV EAMKLYNEM QVGKRP+V TYGALLTGLFQA +V       G +K+YG+  DSCIYGIFLDGL KN                      
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSKN----------------------

Query:  -------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD
                     GKLET WELF+ LSQ+G+Q +VV +NIMIH FC++GQ+          EEN CTP++IT NTLLRGF +SNK  EVV LLHRMVQ+D
Subjt:  -------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD

Query:  VSPNAITCTIVVDMLSKDEEYQECLDLLPR
        V P+  TCTIV+DML KDE+Y+ECLDLLPR
Subjt:  VSPNAITCTIVVDMLSKDEEYQECLDLLPR

XP_038897332.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida]3.6e-6358.44Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSKN---------------------
        MLINGYCKT KV EAMKLYNEM QVGKRP+V TYGALLTGLFQA +V       G +K+YG+  DSCIYGIFLDGL KN                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSKN---------------------

Query:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      G LET WELF+ LSQ+G+Q +VV +NIMIH FC++GQ+          EENGCTP++IT NTLLRGF +SNK  EVV LLHRMVQ+
Subjt:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        DVSP+  TCTIVVDML KDE+Y+EC+DLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

TrEMBL top hitse value%identityAlignment
A0A0A0K5M0 Uncharacterized protein9.8e-5955.41Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------
        +L N  C   +VEEAM LYNEM QVGKRP+  TYG LLTGLFQ  +VG        +K+YGI  DSCIY IFLDGL KN                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------

Query:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GKLET WELFE L Q+G+Q DVV +NIMIH FCK GQ+          EENGCTPDIITYNTLL GF +SNK  EVV LLH+M+Q+
Subjt:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        D+SP+AI+C IV+DML KDE+YQECLDLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

A0A1S4DYL6 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like1.4e-6058.01Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------
        +LINGYCKT KVEEAMKLYNEM  VGKRP+VITYGALLTGLF A +VG       A+K+ GI  +S IYGI LDGL KN                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------

Query:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GKLET WELFE LSQ+G+Q +VV ++IMIH  C+EGQ+          E NGC P+IITYNTL+RGFY+SNKL EVV LLH MV+K
Subjt:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        DV P+A TC+IVVDML KDE+YQECLDLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

A0A5A7UUW8 Pentatricopeptide repeat-containing protein1.2e-5957.14Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------
        +LINGYCKT KVEEAMKLYN+M  VGKRP+VITYGALLTGLF A +VG       A+K++GI E+SCIY IFLDGL KN                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------

Query:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GKLET WELFE LSQ+G+Q +VV +NIMI  FCK G          ++EENGCTP IITY+ LLR F +SNK  EVV LLH+MVQ+
Subjt:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        DVSP+   CTIVVDML KDE+Y+ECLDLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

A0A5D3C8J0 Pentatricopeptide repeat-containing protein1.4e-6058.01Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------
        +LINGYCKT KVEEAMKLYNEM  VGKRP+VITYGALLTGLF A +VG       A+K+ GI  +S IYGI LDGL KN                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKN---------------------

Query:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GKLET WELFE LSQ+G+Q +VV ++IMIH  C+EGQ+          E NGC P+IITYNTL+RGFY+SNKL EVV LLH MV+K
Subjt:  --------------GKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        DV P+A TC+IVVDML KDE+YQECLDLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

A0A6P3ZCY1 pentatricopeptide repeat-containing protein At5g65560-like4.2e-7035.01Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLD---------------------------
        LINGYCK WK +E M L+ EM   G RPSV TY ALLTGLFQ  +V         ++  G+  +S  Y IFLD                           
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLD---------------------------

Query:  --------GLSKNGKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD
                GL K+ KLE   ELF  L   G+  DVV +NI+I+  CKE           ++EE GC PDI+TYNTL+ GF +++K + VV LL +M +K+
Subjt:  --------GLSKNGKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD

Query:  VSPNAITCTIVVDMLSKDEEYQECLDLLP-----------------------------------------------------------------------
        V P+A T +IV+D+LS D+ Y+ECL+LLP                                                                       
Subjt:  VSPNAITCTIVVDMLSKDEEYQECLDLLP-----------------------------------------------------------------------

Query:  --------------------RSYMT------CK---ITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILI
                            R+ +T      CK    T TE L +FD M    P P +SSFN LLG L +       L++  +M L GLLP  +TLN+LI
Subjt:  --------------------RSYMT------CK---ITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILI

Query:  DWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINC
        +  CNVNR+ +G V +  ++R  Y P+ VTYT+L+KGLC E RI EA KLF +M K            L+KGL  T N +IA+KLH+ + +  S YG+ C
Subjt:  DWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINC

Query:  KPNDICYSIIIDGLCKD
        +PN + Y  II GLCK+
Subjt:  KPNDICYSIIIDGLCKD

SwissProt top hitse value%identityAlignment
Q0WKV3 Pentatricopeptide repeat-containing protein At1g12300, mitochondrial1.2e-3225.59Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV
        L+NG C + K  EAM L ++M + G +P+ +TYG +L  + ++ +          ++   I  D+  Y I +DGL K+G L+  + LF  +  KG+  ++
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV

Query:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        + +NI+I  FC  G+ ++              P+++T++ L+  F K  KL E   L   M+ + ++P+ IT T ++D   K+    +   ++       
Subjt:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
                   DLM      P I +FN L+ G  + N       +  KM L G++   +T N LI   C + ++         ++     P+ VTY  L+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK
         GLC      +A ++F +++K    L    +I I   +  GM + +     + + C       KP    Y+I+I GLCK
Subjt:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099001.9e-3024.21Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV----GAIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDVVAH
        LI G+C+  K  +A K+   +   G  P VITY  +++G  +A  +      +    +  D   Y   L  L  +GKL+   E+ + + Q+    DV+ +
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV----GAIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDVVAH

Query:  NIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTCKIT
         I+I   C++           ++ + GCTPD++TYN L+ G  K  +L E +  L+ M      PN IT  I++  +     + +   LL          
Subjt:  NIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTCKIT

Query:  ETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGIL-RSCYIPDTVTYTTLIKG
                  M R   +P + +FN L+  L R       ++I  KM   G  P  ++ N L+   C   ++   +  +  ++ R CY PD VTY T++  
Subjt:  ETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGIL-RSCYIPDTVTYTTLIKG

Query:  LCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD
        LC + ++ +A ++  ++              ++ GL        A+KL   M  +      + KP+ I YS ++ GL ++
Subjt:  LCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD

Q9ASZ8 Pentatricopeptide repeat-containing protein At1g126205.2e-3326.39Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV
        L+NG C   KV +A+ L + M + G +P+ +TYG +L  + ++ +          ++   I  D+  Y I +DGL K+G L+  + LF  +  KG + D+
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV

Query:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        + +  +I  FC  G+ ++             TPD++ ++ L+  F K  KL E   L   M+Q+ +SP+ +T T ++D   K+ +    LD         
Subjt:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITP-------KMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
             +  H  DLM      P I +FN L+ G  + N+         KM L G++   +T N LI   C + +++        ++     PD V+Y  L+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITP-------KMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK
         GLC      +A ++F +++K    L    +I I   +  GM + +     + + C       KP+   Y+I+I GLCK
Subjt:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial1.2e-3427.37Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV
        L+NG C   +V EA++L + M ++G +P++IT   L+ GL    +V         +   G   +   YG  L+ + K+G+     EL   + ++ ++LD 
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV

Query:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        V ++I+I   CK+G          ++E  G   DIITYNTL+ GF  + +  +   LL  M+++ +SPN +T ++++D   K+ + +E   LL       
Subjt:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
                     M +    P   ++N L+ G  + N       +   M   G  P +MT NILI+  C  NR+ +GL     +     I +TVTY TL+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC
        +G C   ++  A KLF  M            + L+ GL     +  AL++   +  E S+  ++       Y III G+C
Subjt:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC

Q9T0D6 Pentatricopeptide repeat-containing protein At4g116903.2e-3023.99Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIK-------SYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLD
        +LI G C+  ++E++  L  E+ + G  P+V+ Y  L+ G  +   +   K         G+V +   Y + ++GL KNG  +  +E++E + + GV  +
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIK-------SYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLD

Query:  VVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMT
        +  +N ++++ CK+G          ++ E G + +I+TYNTL+ G  +  KL E   ++ +M    ++PN IT   ++D      +  + L L       
Subjt:  VVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMT

Query:  CKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTL
        C+  ++ GL           +P + ++N L+ G  R         +  +M   G+ P  +T  ILID     + +++ +     +     +PD  TY+ L
Subjt:  CKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTL

Query:  IKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD
        I G C++ ++NEA +LF  M +                              NC+PN++ Y+ +I G CK+
Subjt:  IKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD

Arabidopsis top hitse value%identityAlignment
AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.3e-3124.21Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV----GAIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDVVAH
        LI G+C+  K  +A K+   +   G  P VITY  +++G  +A  +      +    +  D   Y   L  L  +GKL+   E+ + + Q+    DV+ +
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV----GAIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDVVAH

Query:  NIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTCKIT
         I+I   C++           ++ + GCTPD++TYN L+ G  K  +L E +  L+ M      PN IT  I++  +     + +   LL          
Subjt:  NIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTCKIT

Query:  ETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGIL-RSCYIPDTVTYTTLIKG
                  M R   +P + +FN L+  L R       ++I  KM   G  P  ++ N L+   C   ++   +  +  ++ R CY PD VTY T++  
Subjt:  ETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGIL-RSCYIPDTVTYTTLIKG

Query:  LCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD
        LC + ++ +A ++  ++              ++ GL        A+KL   M  +      + KP+ I YS ++ GL ++
Subjt:  LCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD

AT1G12300.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.3e-3425.59Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV
        L+NG C + K  EAM L ++M + G +P+ +TYG +L  + ++ +          ++   I  D+  Y I +DGL K+G L+  + LF  +  KG+  ++
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV

Query:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        + +NI+I  FC  G+ ++              P+++T++ L+  F K  KL E   L   M+ + ++P+ IT T ++D   K+    +   ++       
Subjt:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
                   DLM      P I +FN L+ G  + N       +  KM L G++   +T N LI   C + ++         ++     P+ VTY  L+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK
         GLC      +A ++F +++K    L    +I I   +  GM + +     + + C       KP    Y+I+I GLCK
Subjt:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK

AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein3.7e-3426.39Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV
        L+NG C   KV +A+ L + M + G +P+ +TYG +L  + ++ +          ++   I  D+  Y I +DGL K+G L+  + LF  +  KG + D+
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV

Query:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        + +  +I  FC  G+ ++             TPD++ ++ L+  F K  KL E   L   M+Q+ +SP+ +T T ++D   K+ +    LD         
Subjt:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITP-------KMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
             +  H  DLM      P I +FN L+ G  + N+         KM L G++   +T N LI   C + +++        ++     PD V+Y  L+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITP-------KMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK
         GLC      +A ++F +++K    L    +I I   +  GM + +     + + C       KP+   Y+I+I GLCK
Subjt:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK

AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein8.8e-3627.37Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV
        L+NG C   +V EA++L + M ++G +P++IT   L+ GL    +V         +   G   +   YG  L+ + K+G+     EL   + ++ ++LD 
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDV

Query:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        V ++I+I   CK+G          ++E  G   DIITYNTL+ GF  + +  +   LL  M+++ +SPN +T ++++D   K+ + +E   LL       
Subjt:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
                     M +    P   ++N L+ G  + N       +   M   G  P +MT NILI+  C  NR+ +GL     +     I +TVTY TL+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC
        +G C   ++  A KLF  M            + L+ GL     +  AL++   +  E S+  ++       Y III G+C
Subjt:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC

AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.3e-3123.99Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIK-------SYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLD
        +LI G C+  ++E++  L  E+ + G  P+V+ Y  L+ G  +   +   K         G+V +   Y + ++GL KNG  +  +E++E + + GV  +
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIK-------SYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLD

Query:  VVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMT
        +  +N ++++ CK+G          ++ E G + +I+TYNTL+ G  +  KL E   ++ +M    ++PN IT   ++D      +  + L L       
Subjt:  VVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMT

Query:  CKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTL
        C+  ++ GL           +P + ++N L+ G  R         +  +M   G+ P  +T  ILID     + +++ +     +     +PD  TY+ L
Subjt:  CKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTL

Query:  IKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD
        I G C++ ++NEA +LF  M +                              NC+PN++ Y+ +I G CK+
Subjt:  IKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATTAATGGGTATTGTAAAACTTGGAAGGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCCTCAAGTGGGAAAGAGGCCAAGTGTGATAACATATGGTGCCTT
GCTAACAGGGCTTTTTCAGGCAAGCAGGGTTGGGGCCATTAAATCTTATGGTATTGTCGAAGATTCATGTATATATGGTATTTTCTTAGATGGGTTGAGTAAGAATGGAA
AACTTGAAACTACTTGGGAGCTTTTTGAAAACCTATCCCAAAAAGGGGTTCAACTAGATGTTGTGGCTCATAACATTATGATCCATGAGTTTTGTAAAGAGGGACAAATA
GAAGAAAATGGTTGTACTCCCGACATAATTACTTATAATACACTTCTGCGTGGTTTCTACAAAAGTAATAAATTAGCGGAGGTGGTTGCACTTCTTCATAGGATGGTTCA
AAAGGATGTGTCGCCAAATGCCATAACTTGCACCATAGTCGTAGACATGCTTTCCAAAGATGAAGAATATCAAGAATGTCTAGACTTGCTTCCAAGGAGCTATATGACTT
GTAAAATTACCGAAACTGAAGGATTACATTTCTTTGACCTAATGACGCGTTCAAATCCCACCCCTCCGATATCTTCATTCAATCATCTACTTGGTGGACTTCTAAGATTA
AACATTACTCCCAAAATGCGCCTAGCTGGACTTTTGCCTGGTTTAATGACGCTGAATATTTTGATTGATTGGCTTTGTAATGTGAATCGGGTTAAAGAAGGTCTAGTGGC
CATGGCAGGGATTTTAAGGAGTTGTTATATTCCTGATACGGTGACATATACGACCTTGATTAAGGGCTTGTGTATGGAGCCTAGGATTAATGAAGCGCCAAAGTTATTTA
TGAGAATGCAAAAGTTAGTCAAGGGACTCTATCCAACGTGGAATATTAACATTGCACTTAAGTTGCATCAAGGAATGCTCCATGAGACTAGTCGATATGGGATTAATTGT
AAGCCTAATGACATTTGCTATTCTATCATTATAGACGGACTTTGTAAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATTAATGGGTATTGTAAAACTTGGAAGGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCCTCAAGTGGGAAAGAGGCCAAGTGTGATAACATATGGTGCCTT
GCTAACAGGGCTTTTTCAGGCAAGCAGGGTTGGGGCCATTAAATCTTATGGTATTGTCGAAGATTCATGTATATATGGTATTTTCTTAGATGGGTTGAGTAAGAATGGAA
AACTTGAAACTACTTGGGAGCTTTTTGAAAACCTATCCCAAAAAGGGGTTCAACTAGATGTTGTGGCTCATAACATTATGATCCATGAGTTTTGTAAAGAGGGACAAATA
GAAGAAAATGGTTGTACTCCCGACATAATTACTTATAATACACTTCTGCGTGGTTTCTACAAAAGTAATAAATTAGCGGAGGTGGTTGCACTTCTTCATAGGATGGTTCA
AAAGGATGTGTCGCCAAATGCCATAACTTGCACCATAGTCGTAGACATGCTTTCCAAAGATGAAGAATATCAAGAATGTCTAGACTTGCTTCCAAGGAGCTATATGACTT
GTAAAATTACCGAAACTGAAGGATTACATTTCTTTGACCTAATGACGCGTTCAAATCCCACCCCTCCGATATCTTCATTCAATCATCTACTTGGTGGACTTCTAAGATTA
AACATTACTCCCAAAATGCGCCTAGCTGGACTTTTGCCTGGTTTAATGACGCTGAATATTTTGATTGATTGGCTTTGTAATGTGAATCGGGTTAAAGAAGGTCTAGTGGC
CATGGCAGGGATTTTAAGGAGTTGTTATATTCCTGATACGGTGACATATACGACCTTGATTAAGGGCTTGTGTATGGAGCCTAGGATTAATGAAGCGCCAAAGTTATTTA
TGAGAATGCAAAAGTTAGTCAAGGGACTCTATCCAACGTGGAATATTAACATTGCACTTAAGTTGCATCAAGGAATGCTCCATGAGACTAGTCGATATGGGATTAATTGT
AAGCCTAATGACATTTGCTATTCTATCATTATAGACGGACTTTGTAAGGATTGA
Protein sequenceShow/hide protein sequence
MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIKSYGIVEDSCIYGIFLDGLSKNGKLETTWELFENLSQKGVQLDVVAHNIMIHEFCKEGQI
EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTCKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRL
NITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINC
KPNDICYSIIIDGLCKD