| GenBank top hits | e value | %identity | Alignment |
|---|
| AAC64917.1 gag-pol polyprotein [Glycine max] | 1.0e-37 | 28.34 | Show/hide |
Query: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
P++ D +GK +L E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I EF+
Subjt: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
Query: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
+LRSLPKRFDMKVTAIEEA DI M+ +S + E + ++D+ L
Subjt: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
Query: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
++ LL KQF + L R D+R P N+ ++ G + D K K +C CEGYGH +AECP L DD E SDSD +++AL
Subjt: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
Query: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
G + +SSD + + F+ + + LE + I ELK E+ ++LE+MTKS KG L +V
Subjt: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
Query: VSAQHV-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHV
++V + P +H +KKW CH+CG+ HI +C+ L+G H +S K V +H
Subjt: VSAQHV-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHV
Query: KNLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: KNLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| AAO73523.1 gag-pol polyprotein [Glycine max] | 1.0e-37 | 28.39 | Show/hide |
Query: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
P++ D +GK +L E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I +F+
Subjt: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
Query: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
+LRSLPKRFDMKVTAIEEA DI M+ +S + E + ++D+ L
Subjt: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
Query: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQD---SKDKKFKCRECEGYGHYQAECPNFLS---------DDDEEVTSSSDSDEEIHALV
++ LL KQF + L R DKR P N+ ++ G + D S K +C CEGYGH AECP L D E SDSD +++AL+
Subjt: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQD---SKDKKFKCRECEGYGHYQAECPNFLS---------DDDEEVTSSSDSDEEIHALV
Query: GCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVFV
G + +SSD + + F+ + + LE + I ELK E+ ++LE+MTKS KG +L +V +
Subjt: GCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVFV
Query: SAQH-------------------VQITPHDYKQKCVCDEH--AQHKFQ------KKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHVK
++ + P + +H H Q KKW CH+CG+ HI +C+ L+G H +S K V +H
Subjt: SAQH-------------------VQITPHDYKQKCVCDEH--AQHKFQ------KKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHVK
Query: NLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: NLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| AAO73525.1 gag-pol polyprotein [Glycine max] | 2.3e-37 | 28.78 | Show/hide |
Query: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI-------------------------------------AAFNYKFESLKMSEEETITEF
P++ D +GK +L E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I +F
Subjt: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI-------------------------------------AAFNYKFESLKMSEEETITEF
Query: N-------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLA
+ +LRSLPKRFDMKVTAIEEA DI M+ +S + E + ++D+ L
Subjt: N-------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLA
Query: QSISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHA
++ LL KQF + L R D+R P N+ ++ G + D K K +C CEGYGH +AECP L DD E SDSD +++A
Subjt: QSISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHA
Query: LVGCL---SPSSVLEANSSD----YCNVLIFE---TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVFVSAQH
L G SS +E + Y + I + + LE + I ELK E+ ++LE+MTKS KG L +V ++
Subjt: LVGCL---SPSSVLEANSSD----YCNVLIFE---TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVFVSAQH
Query: V-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHVKNLRS
V + P +H +KKW CH+CG+ HI +C+ L+G H +S K V +H
Subjt: V-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHVKNLRS
Query: NKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
K+ V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: NKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 5.1e-37 | 27.66 | Show/hide |
Query: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
P++ D +GK +L E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I +F+
Subjt: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
Query: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
+LRSLPKRFDMKVTAIEEA DI M+ +S + E + ++D+ L
Subjt: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
Query: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
++ L KQF + L R D+R P N+S ++ G + D K K +CR CEGYGH +AECP L DD E SDSD +++AL
Subjt: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
Query: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
G + +SSD + + F+ + + LE + I +LK E+ ++LE+MTKS KG L +V
Subjt: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
Query: VSAQHV-------------------QITPHDYKQKCVCDEH--------AQHKFQKKWICHFCGRASHIHLYCFWLYGSRAHQRSHKLPFKAHGVAQHVK
+ V + P +H + +KKW CH+CG+ HI +C+ L+G H + + +
Subjt: VSAQHV-------------------QITPHDYKQKCVCDEH--------AQHKFQKKWICHFCGRASHIHLYCFWLYGSRAHQRSHKLPFKAHGVAQHVK
Query: NLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
+ +K+ V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: NLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| NP_001235160.1 gag-protease polyprotein [Glycine max] | 1.2e-38 | 28.52 | Show/hide |
Query: PQVTDAKGKV--GAKLEKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
P++ D +GK G K E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I +F+
Subjt: PQVTDAKGKV--GAKLEKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
Query: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
+LRSLPKRFDMKVTAIEEA DI ++ +S + E + ++D+ L
Subjt: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
Query: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
++ LL KQF + L R D+R P N+ ++ G + D K K F+C CEGYGH +AECP L DD E SDSD +++AL
Subjt: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
Query: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
G + +SSD + + F+ + + LE + I ELK E+ ++LE+MTKS KG L +V
Subjt: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
Query: VSAQHV-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHV
++V + P +H +KKW CH+CG+ HI +C+ L+G H +S K V +H
Subjt: VSAQHV-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHV
Query: KNLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
K+ V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: KNLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| O65147 Gag-pol polyprotein | 5.0e-38 | 28.34 | Show/hide |
Query: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
P++ D +GK +L E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I EF+
Subjt: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
Query: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
+LRSLPKRFDMKVTAIEEA DI M+ +S + E + ++D+ L
Subjt: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
Query: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
++ LL KQF + L R D+R P N+ ++ G + D K K +C CEGYGH +AECP L DD E SDSD +++AL
Subjt: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
Query: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
G + +SSD + + F+ + + LE + I ELK E+ ++LE+MTKS KG L +V
Subjt: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
Query: VSAQHV-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHV
++V + P +H +KKW CH+CG+ HI +C+ L+G H +S K V +H
Subjt: VSAQHV-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHV
Query: KNLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: KNLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| Q84VH6 Gag-pol polyprotein | 2.5e-37 | 27.66 | Show/hide |
Query: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
P++ D +GK +L E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I +F+
Subjt: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
Query: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
+LRSLPKRFDMKVTAIEEA DI M+ +S + E + ++D+ L
Subjt: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
Query: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
++ L KQF + L R D+R P N+S ++ G + D K K +CR CEGYGH +AECP L DD E SDSD +++AL
Subjt: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
Query: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
G + +SSD + + F+ + + LE + I +LK E+ ++LE+MTKS KG L +V
Subjt: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
Query: VSAQHV-------------------QITPHDYKQKCVCDEH--------AQHKFQKKWICHFCGRASHIHLYCFWLYGSRAHQRSHKLPFKAHGVAQHVK
+ V + P +H + +KKW CH+CG+ HI +C+ L+G H + + +
Subjt: VSAQHV-------------------QITPHDYKQKCVCDEH--------AQHKFQKKWICHFCGRASHIHLYCFWLYGSRAHQRSHKLPFKAHGVAQHVK
Query: NLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
+ +K+ V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: NLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| Q84VI0 Gag-pol polyprotein | 1.1e-37 | 28.78 | Show/hide |
Query: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI-------------------------------------AAFNYKFESLKMSEEETITEF
P++ D +GK +L E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I +F
Subjt: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI-------------------------------------AAFNYKFESLKMSEEETITEF
Query: N-------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLA
+ +LRSLPKRFDMKVTAIEEA DI M+ +S + E + ++D+ L
Subjt: N-------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLA
Query: QSISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHA
++ LL KQF + L R D+R P N+ ++ G + D K K +C CEGYGH +AECP L DD E SDSD +++A
Subjt: QSISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHA
Query: LVGCL---SPSSVLEANSSD----YCNVLIFE---TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVFVSAQH
L G SS +E + Y + I + + LE + I ELK E+ ++LE+MTKS KG L +V ++
Subjt: LVGCL---SPSSVLEANSSD----YCNVLIFE---TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVFVSAQH
Query: V-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHVKNLRS
V + P +H +KKW CH+CG+ HI +C+ L+G H +S K V +H
Subjt: V-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHVKNLRS
Query: NKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
K+ V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: NKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| Q84VI2 Gag-pol polyprotein | 5.0e-38 | 28.39 | Show/hide |
Query: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
P++ D +GK +L E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I +F+
Subjt: PQVTDAKGKVGAKL--EKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
Query: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
+LRSLPKRFDMKVTAIEEA DI M+ +S + E + ++D+ L
Subjt: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
Query: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQD---SKDKKFKCRECEGYGHYQAECPNFLS---------DDDEEVTSSSDSDEEIHALV
++ LL KQF + L R DKR P N+ ++ G + D S K +C CEGYGH AECP L D E SDSD +++AL+
Subjt: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQD---SKDKKFKCRECEGYGHYQAECPNFLS---------DDDEEVTSSSDSDEEIHALV
Query: GCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVFV
G + +SSD + + F+ + + LE + I ELK E+ ++LE+MTKS KG +L +V +
Subjt: GCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVFV
Query: SAQH-------------------VQITPHDYKQKCVCDEH--AQHKFQ------KKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHVK
++ + P + +H H Q KKW CH+CG+ HI +C+ L+G H +S K V +H
Subjt: SAQH-------------------VQITPHDYKQKCVCDEH--AQHKFQ------KKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHVK
Query: NLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: NLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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| V9H042 Gag-protease polyprotein | 5.9e-39 | 28.52 | Show/hide |
Query: PQVTDAKGKV--GAKLEKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
P++ D +GK G K E+DW +EEDE LGNS+A NA+FNG+ KFE+LKM EEE I +F+
Subjt: PQVTDAKGKV--GAKLEKDWIEEEDEAFLGNSRAPNAIFNGI------------------------------------AAFNYKFESLKMSEEETITEFN
Query: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
+LRSLPKRFDMKVTAIEEA DI ++ +S + E + ++D+ L
Subjt: -------------------------VLRSLPKRFDMKVTAIEEAHDIATMK----------------------------LSVEPDAESYKNKESDKNLAQ
Query: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
++ LL KQF + L R D+R P N+ ++ G + D K K F+C CEGYGH +AECP L DD E SDSD +++AL
Subjt: SISLLTKQFEEALRRWDKRSMPRNSNVSSNVDNGKGFGSSQDSK---DKKFKCRECEGYGHYQAECPNFLS----------DDDEEVTSSSDSDEEIHAL
Query: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
G + +SSD + + F+ + + LE + I ELK E+ ++LE+MTKS KG L +V
Subjt: VGCLSPSSVLEANSSDYCNVLIFE----------------TSPNRETDQHCLTLEEDNLRLLSTIFELKKELRITKAELESMTKSFPNELKGESSLLKVF
Query: VSAQHV-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHV
++V + P +H +KKW CH+CG+ HI +C+ L+G H +S K V +H
Subjt: VSAQHV-------------------QITPHDYKQKCVCDEHAQHKF--------QKKWICHFCGRASHIHLYCFWLYGSRAH-QRSHKLPFKAHGVAQHV
Query: KNLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
K+ V T+LR+S ++DWY D+GCS+HMTG + IE
Subjt: KNLRSNKVEKCQVALTTLRSSIQKDWYFDNGCSQHMTGKSDQKWQIE
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