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Cla97C10G190153 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G190153
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCla97Chr10:7299982..7301470
RNA-Seq ExpressionCla97C10G190153
SyntenyCla97C10G190153
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.7e-0840.48Show/hide
Query:  FQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYI
        F+G + +   +  N+G  WW+SA+YG  K  KNR   W+E E L +   P W+LGGD NVI W  ET+    +  +M +FN +I
Subjt:  FQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYI

KAA0044449.1 hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa]3.6e-1033.59Show/hide
Query:  LSKWLQENNLRVI------------------------LATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWL
        L+ WL+ENNLR+                         +    V ++   G + +   +  N+G SWW+SA+YG  K  KNR   W+E E+L +   P W+
Subjt:  LSKWLQENNLRVI------------------------LATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWL

Query:  LGGDLNVIHWLIETSAIYSSKHNMNKFNHYI
        LGGD NVI W  ETS    +  +M +FN +I
Subjt:  LGGDLNVIHWLIETSAIYSSKHNMNKFNHYI

TYJ99326.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.2e-1143.68Show/hide
Query:  QNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYI
        Q+ F+GN+ +   +  N+G SWW+SA+YG  K  KNR   W+E E+L +   P W+LGGD NVI W  ETS    +  +M +FN +I
Subjt:  QNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYI

TYK29577.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.1e-1036.67Show/hide
Query:  LSKWLQENNLRVIL-------------ATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWL
        L+ WL+ENNLR+                 +I+      G + +   +  N+G SWW+SA+YG  K  KNR   W+E E+L +   P W+LGGD NVI W 
Subjt:  LSKWLQENNLRVIL-------------ATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWL

Query:  IETSAIYSSKHNMNKFNHYI
         ETS    +  +M +FN +I
Subjt:  IETSAIYSSKHNMNKFNHYI

XP_011650214.1 uncharacterized protein LOC105434766 [Cucumis sativus]2.8e-0740.96Show/hide
Query:  GNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYIV
        G + I T     DG++WWI+++Y  V   + RK  W+E  +L    G  WLL GD N I W IETS+    K++M KFN+ I+
Subjt:  GNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYIV

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein2.8e-0840.48Show/hide
Query:  FQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYI
        F+G + +   +  N+G  WW+SA+YG  K  KNR   W+E E L +   P W+LGGD NVI W  ET+    +  +M +FN +I
Subjt:  FQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYI

A0A5A7TTA1 DUF4283 domain-containing protein1.7e-1033.59Show/hide
Query:  LSKWLQENNLRVI------------------------LATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWL
        L+ WL+ENNLR+                         +    V ++   G + +   +  N+G SWW+SA+YG  K  KNR   W+E E+L +   P W+
Subjt:  LSKWLQENNLRVI------------------------LATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWL

Query:  LGGDLNVIHWLIETSAIYSSKHNMNKFNHYI
        LGGD NVI W  ETS    +  +M +FN +I
Subjt:  LGGDLNVIHWLIETSAIYSSKHNMNKFNHYI

A0A5D3BJP3 LINE-1 retrotransposable element ORF2 protein3.5e-1143.68Show/hide
Query:  QNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYI
        Q+ F+GN+ +   +  N+G SWW+SA+YG  K  KNR   W+E E+L +   P W+LGGD NVI W  ETS    +  +M +FN +I
Subjt:  QNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYI

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein5.2e-0727.62Show/hide
Query:  LCGWISE---RRDTQSSTTTPTAFTKTLLSQIKQS-KIAHLRCYQE---ASLSKWLQENNLRVILATTIV--GQN-----DFQGNYFIFTCITLNDGFSW
        L  W+ +   +  T + ++  T  T  LL+Q+    KI + R  +    ++   W+ +N         I+   QN       +G + +     LN+  SW
Subjt:  LCGWISE---RRDTQSSTTTPTAFTKTLLSQIKQS-KIAHLRCYQE---ASLSKWLQENNLRVILATTIV--GQN-----DFQGNYFIFTCITLNDGFSW

Query:  WISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYIVKTLILSQISKVNQFS
        W++ LYG VK  + R   W E  +L       W+LGGDLNVI    E++++ SS HN    N++I   L++      N+F+
Subjt:  WISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYIVKTLILSQISKVNQFS

A0A5D3E0F6 LINE-1 retrotransposable element ORF2 protein1.0e-1036.67Show/hide
Query:  LSKWLQENNLRVIL-------------ATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWL
        L+ WL+ENNLR+                 +I+      G + +   +  N+G SWW+SA+YG  K  KNR   W+E E+L +   P W+LGGD NVI W 
Subjt:  LSKWLQENNLRVIL-------------ATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKWGKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWL

Query:  IETSAIYSSKHNMNKFNHYI
         ETS    +  +M +FN +I
Subjt:  IETSAIYSSKHNMNKFNHYI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTATGGTACAACATTGTGGCGTTGATAGGAATTTTATGCGGGTGGATATCGGAGCGTCGTGACACTCAAAGCAGCACCACGACGCCAACTGCTTTCACCAAAAC
GCTTCTTTCCCAAATTAAGCAGAGCAAGATAGCACATCTACGGTGCTATCAAGAGGCTTCTCTCAGCAAATGGCTCCAAGAAAACAACTTAAGGGTGATACTTGCAACAA
CTATAGTAGGACAAAATGATTTCCAAGGAAACTACTTTATCTTCACGTGCATTACCCTAAATGATGGCTTTAGTTGGTGGATTTCTGCTCTGTATGGCTCGGTCAAGTGG
GGAAAAAATAGAAAATTCCTATGGAAAGAATTTGAATCTCTTTATACAAAACGTGGGCCTTATTGGCTATTGGGAGGGGACTTGAATGTGATTCATTGGCTCATAGAAAC
CTCTGCTATATACTCGAGTAAACATAATATGAACAAGTTCAATCACTACATTGTTAAGACTCTTATACTTAGTCAAATCTCAAAAGTCAACCAGTTCTCTCTCGACTGGA
TCGTTACTTGTATACTCCTCAATGGGAAAACAAATTCAAGCCTCATTGTTCTAGATTTCTCACTCGTGTTATCTTTGATCACTATCTTGCGATCTTATAAACAACACAAT
TATCCTGAGGTCATTTCTCCTTTCGATTCAACAATGGTAACTTGGCATCCACAGACTGATAGTCTTTATATGATAGTTGTCAATGTTGATCTAAACATTGAAGCTCTCAA
AGGAAACACACTATTGGGCTCAAAGATGCAAAAAACAATGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACACTATGGTACAACATTGTGGCGTTGATAGGAATTTTATGCGGGTGGATATCGGAGCGTCGTGACACTCAAAGCAGCACCACGACGCCAACTGCTTTCACCAAAAC
GCTTCTTTCCCAAATTAAGCAGAGCAAGATAGCACATCTACGGTGCTATCAAGAGGCTTCTCTCAGCAAATGGCTCCAAGAAAACAACTTAAGGGTGATACTTGCAACAA
CTATAGTAGGACAAAATGATTTCCAAGGAAACTACTTTATCTTCACGTGCATTACCCTAAATGATGGCTTTAGTTGGTGGATTTCTGCTCTGTATGGCTCGGTCAAGTGG
GGAAAAAATAGAAAATTCCTATGGAAAGAATTTGAATCTCTTTATACAAAACGTGGGCCTTATTGGCTATTGGGAGGGGACTTGAATGTGATTCATTGGCTCATAGAAAC
CTCTGCTATATACTCGAGTAAACATAATATGAACAAGTTCAATCACTACATTGTTAAGACTCTTATACTTAGTCAAATCTCAAAAGTCAACCAGTTCTCTCTCGACTGGA
TCGTTACTTGTATACTCCTCAATGGGAAAACAAATTCAAGCCTCATTGTTCTAGATTTCTCACTCGTGTTATCTTTGATCACTATCTTGCGATCTTATAAACAACACAAT
TATCCTGAGGTCATTTCTCCTTTCGATTCAACAATGGTAACTTGGCATCCACAGACTGATAGTCTTTATATGATAGTTGTCAATGTTGATCTAAACATTGAAGCTCTCAA
AGGAAACACACTATTGGGCTCAAAGATGCAAAAAACAATGGTTTAG
Protein sequenceShow/hide protein sequence
MTLWYNIVALIGILCGWISERRDTQSSTTTPTAFTKTLLSQIKQSKIAHLRCYQEASLSKWLQENNLRVILATTIVGQNDFQGNYFIFTCITLNDGFSWWISALYGSVKW
GKNRKFLWKEFESLYTKRGPYWLLGGDLNVIHWLIETSAIYSSKHNMNKFNHYIVKTLILSQISKVNQFSLDWIVTCILLNGKTNSSLIVLDFSLVLSLITILRSYKQHN
YPEVISPFDSTMVTWHPQTDSLYMIVVNVDLNIEALKGNTLLGSKMQKTMV