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Cla97C10G190450 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G190450
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionProtein RRP5
Genome locationCla97Chr10:8399565..8401600
RNA-Seq ExpressionCla97C10G190450
SyntenyCla97C10G190450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3385.86Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKN+NKKKRSG ISMD+TENT  + PQAMDVSESAVHKPASGA NLKLKKGRPMKRSKNVRKT AKAKAISK+EQS EKI+KNQ+KTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]3.2e-3385.86Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKNRNKKKR G +SMDVTEN+VH+ PQAMDVS S VHKPASGA +LKLKKGRPMKRSKNVRKTKA AKAISKSEQS EKI+KNQ+KTTRIQSAKTLYE
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

XP_022929206.1 uncharacterized protein LOC111435867 [Cucurbita moschata]1.4e-3385.86Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKN+NKKKRSG ISMD+TENT  + PQAMDVSESAVHKPASGA NLKLKKGRPMKRSKNVRKT AKAKAISK+EQS EKI+KNQ+KTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

XP_022985277.1 uncharacterized protein LOC111483316 [Cucurbita maxima]1.2e-3285.86Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKN+N KKRSG ISMD+TENT H+ PQAMDVSESAVHKPASGA NLKLKKGRPMKRSKNVRKT AKAKAISK+EQS EKI+KNQ+KTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

XP_038903593.1 uncharacterized protein LOC120090147 [Benincasa hispida]4.0e-3689.9Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKNRNKKKRSGP+SMDVTENTVH+ PQAMDVSESAVHKP SGA NLKLKKGRPMKRSKNVRKTKA AKAISKSEQSTEKI+KNQ+KT RIQSAK LYE
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

TrEMBL top hitse value%identityAlignment
A0A1S3BUB2 uncharacterized protein LOC1034933621.5e-3385.86Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKNRNKKKR G +SMDVTEN+VH+ PQAMDVS S VHKPASGA +LKLKKGRPMKRSKNVRKTKA AKAISKSEQS EKI+KNQ+KTTRIQSAKTLYE
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

A0A6A6MLZ5 Uncharacterized protein4.5e-2571.72Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKNRNKKK++G +SMD+TE TV D PQAMD SES V K ASG PN K+ KGRPMKRSKNVRK KA AKAISK+EQS EK++KN++KT R QSAK LY+
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

A0A6J1CP23 uncharacterized protein LOC1110127892.2e-2484.15Show/hide
Query:  MDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTL
        MD+TENTV D PQAMDVSES VHKP SG  NLKL+KGRPMKRS+NVRKTKA AKAI KSEQS EKIMKNQ+KTTRIQSAKTL
Subjt:  MDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTL

A0A6J1EMH0 uncharacterized protein LOC1114358676.9e-3485.86Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKN+NKKKRSG ISMD+TENT  + PQAMDVSESAVHKPASGA NLKLKKGRPMKRSKNVRKT AKAKAISK+EQS EKI+KNQ+KTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

A0A6J1J4F8 uncharacterized protein LOC1114833165.9e-3385.86Show/hide
Query:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
        MAKN+N KKRSG ISMD+TENT H+ PQAMDVSESAVHKPASGA NLKLKKGRPMKRSKNVRKT AKAKAISK+EQS EKI+KNQ+KTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27380.1 unknown protein1.5e-0432.69Show/hide
Query:  MAKNRNKKKRSGPISMDVTE--NTVHDRPQAMDVSESAVHKPASGAPNL-KLKKGRP-------------------------------------------
        M K RNKK R    SMDV+E  +     PQ MD +E+   K AS A +L   +KG+P                                           
Subjt:  MAKNRNKKKRSGPISMDVTE--NTVHDRPQAMDVSESAVHKPASGAPNL-KLKKGRP-------------------------------------------

Query:  -----------MKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE
                   MKR+KN RK KA AKAI+ SE+   K  K++ KT R  SAK LYE
Subjt:  -----------MKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAACCGGAATAAGAAGAAGCGAAGTGGGCCTATTTCAATGGATGTAACCGAAAACACTGTTCACGACCGCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGT
TCATAAACCAGCTTCCGGCGCTCCCAATTTAAAGTTGAAAAAGGGAAGGCCAATGAAGCGATCAAAGAATGTTAGGAAAACAAAAGCCAAGGCGAAGGCCATATCTAAGA
GCGAGCAGTCAACGGAGAAAATTATGAAAAATCAGAACAAAACTACCAGAATACAATCTGCAAAAACATTGTATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGAACCGGAATAAGAAGAAGCGAAGTGGGCCTATTTCAATGGATGTAACCGAAAACACTGTTCACGACCGCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGT
TCATAAACCAGCTTCCGGCGCTCCCAATTTAAAGTTGAAAAAGGGAAGGCCAATGAAGCGATCAAAGAATGTTAGGAAAACAAAAGCCAAGGCGAAGGCCATATCTAAGA
GCGAGCAGTCAACGGAGAAAATTATGAAAAATCAGAACAAAACTACCAGAATACAATCTGCAAAAACATTGTATGAATGA
Protein sequenceShow/hide protein sequence
MAKNRNKKKRSGPISMDVTENTVHDRPQAMDVSESAVHKPASGAPNLKLKKGRPMKRSKNVRKTKAKAKAISKSEQSTEKIMKNQNKTTRIQSAKTLYE