| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-39 | 26.52 | Show/hide |
Query: LTAVCAATIAMVNTITTLLQLEDNRERSSPLI----RHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVT
L ++ A IA + +L+L N + I RH+I++L +F MI+ D CR++TRMDRR F ILC LLRT GL T+ VD+EEMVA+FLH++
Subjt: LTAVCAATIAMVNTITTLLQLEDNRERSSPLI----RHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVT
Query: HD-------------------------------------KLEPVTENCTDDRWRWLQLIDHAIG-----------------LRKGEIATNVLAVCNQSCE
HD K +PV CTD RWRW + A+ RKGE+ATNVL V + +
Subjt: HD-------------------------------------KLEPVTENCTDDRWRWLQLIDHAIG-----------------LRKGEIATNVLAVCNQSCE
Query: FIFVFAGWEGSAVDSRLLRDAVSKPTELK---------------------------------------PDCANKFSFRWKHPDHAQELQNIFGRMR----
F++V GWEGSA DSR+LRDA+S+P LK P + +F F KH ++ FG ++
Subjt: FIFVFAGWEGSAVDSRLLRDAVSKPTELK---------------------------------------PDCANKFSFRWKHPDHAQELQNIFGRMR----
Query: --RTKSSWSVWTSVYSL-----------------DISELIMEL-SDLDSGKHTTDDAAEV--------------TGVFHTG-------------------
R KS V +++ DI + I+ + S KHT E G F G
Subjt: --RTKSSWSVWTSVYSL-----------------DISELIMEL-SDLDSGKHTTDDAAEV--------------TGVFHTG-------------------
Query: -------------------------CSGFGWNAKRKGIDCETEIFDVWV---------KSFPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDI
CSGFGWN ++K I E E+FD W KSF YD+L+ +FGKDRATG A + A++ S
Subjt: -------------------------CSGFGWNAKRKGIDCETEIFDVWV---------KSFPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDI
Query: LNNQSPDYENF---YIPDPPFASSPM----------------------------------------SEDIPTTLVVESLGVACHQ--EWPVVNEDLESRR
N P Y+ F +PD F SPM S DI T +E H+ EWP++ ++ +
Subjt: LNNQSPDYENF---YIPDPPFASSPM----------------------------------------SEDIPTTLVVESLGVACHQ--EWPVVNEDLESRR
Query: RRRELYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFP
R+E+ +L++IP L++ D + R L+ + + F++ P
Subjt: RRRELYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFP
|
|
| KAA0036995.1 retrotransposon protein [Cucumis melo var. makuwa] | 2.9e-35 | 44.39 | Show/hide |
Query: LIAILTAVCAATIAMVNTITTLLQLEDNRERSSPLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVT
L+ +LT A M+ T+ L+ ++ RH+I++L +F MI+E D CRE+TRMDRR F ILC LLRT GL T+ VD+EEMV +FLH++
Subjt: LIAILTAVCAATIAMVNTITTLLQLEDNRERSSPLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVT
Query: HDKL----EPVTENCTDDRWRWLQ-----------LIDHAIGLR------KGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK
HD+L PVT NC D RW++ + ++ + G R KGEIATNVL VC+ +F++V AGWEGSA DSR+LRDA+S+ L+
Subjt: HDKL----EPVTENCTDDRWRWLQ-----------LIDHAIGLR------KGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK
|
|
| KAA0051849.1 retrotransposon protein [Cucumis melo var. makuwa] | 3.1e-37 | 29.05 | Show/hide |
Query: PLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD-------------------------------
P RH+I++L +F MI+E D CR++TRMDRRTF ILC LLR GL T+ VD+EEMVA+FL ++ HD
Subjt: PLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD-------------------------------
Query: ------KLEPVTENCTDDRWRWLQLIDHAIGLRKGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK---------------------
+ PVT NC D RW+ + I + RKGEIA NVL VC+ +F++V AGWEGSA DSR+LRDA+S+ L+
Subjt: ------KLEPVTENCTDDRWRWLQLIDHAIGLRKGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK---------------------
Query: ------------------PDCANKFSFRWKHPDHAQELQNIFGRMR------RTKSSWSVWTSVYSLD----------ISELIMELSDLDSGKHTTDDAA
P A ++ F KH ++ FG ++ R KS + V D SE I + ++ D+ A
Subjt: ------------------PDCANKFSFRWKHPDHAQELQNIFGRMR------RTKSSWSVWTSVYSLD----------ISELIMELSDLDSGKHTTDDAA
Query: E---VTGVFHTGCSGFGWNA--------KRKGIDCETEIFDVWVKSFPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDILNNQSPDYENFYIP
E H G G+ A K G + + K FP+YD+L +F +DRAT A T A+V S ++ + + + D+ Y
Subjt: E---VTGVFHTGCSGFGWNA--------KRKGIDCETEIFDVWVKSFPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDILNNQSPDYENFYIP
Query: DPPFASSPMSEDIPTTLVVESLGVACHQEWPVVNEDLESRRRRRELYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFP
+ + E I L + + EWP N R E + L+ +P L+ D + R LL+ L FV P
Subjt: DPPFASSPMSEDIPTTLVVESLGVACHQEWPVVNEDLESRRRRRELYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFP
|
|
| KAA0052026.1 retrotransposon protein [Cucumis melo var. makuwa] | 2.7e-36 | 40.22 | Show/hide |
Query: MDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD------KLEPVTENCTDDRWRWLQLI--DHA-IGLRKGEIATNVLAVCNQSCEFIFVFA
MDRR F ILC LLRT GL T+ VD+EEMVA+FLH++THD + E + D + + +I D A KGE+ATNVL VC+ +FI+V A
Subjt: MDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD------KLEPVTENCTDDRWRWLQLI--DHA-IGLRKGEIATNVLAVCNQSCEFIFVFA
Query: GWEGSAVDSRLLRDAVSKPTELK---PDCANKFSFRWKHPDHA------QELQNIFGRMRRTKSSWSVWTS----VYSLDISELIMELSDLDSG----KH
GWEGSA DSR+LRDA+S+P LK + W + A EL N+ G ++ W + + + +L I + S +DS K
Subjt: GWEGSAVDSRLLRDAVSKPTELK---PDCANKFSFRWKHPDHA------QELQNIFGRMRRTKSSWSVWTS----VYSLDISELIMELSDLDSG----KH
Query: TTDDAAEVTGVFHTGCSGFGWNAKRKGIDCETEIFDVWV---------KSFPFYDDLAIMFGKDRATGSHA
AE+ G CSGFGWN ++K I E E FD W KSFP YD+L+ +FGKDRA G A
Subjt: TTDDAAEVTGVFHTGCSGFGWNAKRKGIDCETEIFDVWV---------KSFPFYDDLAIMFGKDRATGSHA
|
|
| KAG6469112.1 hypothetical protein ZIOFF_073810 [Zingiber officinale] | 3.8e-35 | 29.49 | Show/hide |
Query: LIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD--------------------------------
L R+ I+ +N M + D C +N RMDRR+ + LC LL T G L+ + + + E+V FLH++ H+
Subjt: LIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD--------------------------------
Query: -----KLEPVTENCTDDRWRWLQLIDHAIG-----------------LRKGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELKPDCAN
K EP+ ENCTDDRW+W + A+ RKGEIATNVL VC + +F +V GWEGSA D R+LRDA+S+ LK
Subjt: -----KLEPVTENCTDDRWRWLQLIDHAIG-----------------LRKGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELKPDCAN
Query: KFSFRWKHPDHAQELQNIFGRM-----RRTKSSWSVWTSVYSLDISELIMEL------------------------------SDLDSGKHTTDDAAEVTG
+ K + ++N+ M R+T+S+ +WT + + ++EL S L + H +
Subjt: KFSFRWKHPDHAQELQNIFGRM-----RRTKSSWSVWTSVYSLDISELIMEL------------------------------SDLDSGKHTTDDAAEVTG
Query: VFH------TGCSGFGWNAKRKGIDCETEIFDVWVKS-----------FPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDILN
FH SGFGWN K I ++FD WVKS FP DDL ++GKD ATG++A T A+ E + +E D N
Subjt: VFH------TGCSGFGWNAKRKGIDCETEIFDVWVKS-----------FPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDILN
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SWD8 Retrotransposon protein | 5.6e-40 | 26.52 | Show/hide |
Query: LTAVCAATIAMVNTITTLLQLEDNRERSSPLI----RHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVT
L ++ A IA + +L+L N + I RH+I++L +F MI+ D CR++TRMDRR F ILC LLRT GL T+ VD+EEMVA+FLH++
Subjt: LTAVCAATIAMVNTITTLLQLEDNRERSSPLI----RHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVT
Query: HD-------------------------------------KLEPVTENCTDDRWRWLQLIDHAIG-----------------LRKGEIATNVLAVCNQSCE
HD K +PV CTD RWRW + A+ RKGE+ATNVL V + +
Subjt: HD-------------------------------------KLEPVTENCTDDRWRWLQLIDHAIG-----------------LRKGEIATNVLAVCNQSCE
Query: FIFVFAGWEGSAVDSRLLRDAVSKPTELK---------------------------------------PDCANKFSFRWKHPDHAQELQNIFGRMR----
F++V GWEGSA DSR+LRDA+S+P LK P + +F F KH ++ FG ++
Subjt: FIFVFAGWEGSAVDSRLLRDAVSKPTELK---------------------------------------PDCANKFSFRWKHPDHAQELQNIFGRMR----
Query: --RTKSSWSVWTSVYSL-----------------DISELIMEL-SDLDSGKHTTDDAAEV--------------TGVFHTG-------------------
R KS V +++ DI + I+ + S KHT E G F G
Subjt: --RTKSSWSVWTSVYSL-----------------DISELIMEL-SDLDSGKHTTDDAAEV--------------TGVFHTG-------------------
Query: -------------------------CSGFGWNAKRKGIDCETEIFDVWV---------KSFPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDI
CSGFGWN ++K I E E+FD W KSF YD+L+ +FGKDRATG A + A++ S
Subjt: -------------------------CSGFGWNAKRKGIDCETEIFDVWV---------KSFPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDI
Query: LNNQSPDYENF---YIPDPPFASSPM----------------------------------------SEDIPTTLVVESLGVACHQ--EWPVVNEDLESRR
N P Y+ F +PD F SPM S DI T +E H+ EWP++ ++ +
Subjt: LNNQSPDYENF---YIPDPPFASSPM----------------------------------------SEDIPTTLVVESLGVACHQ--EWPVVNEDLESRR
Query: RRRELYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFP
R+E+ +L++IP L++ D + R L+ + + F++ P
Subjt: RRRELYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFP
|
|
| A0A5A7T686 Retrotransposon protein | 1.4e-35 | 44.39 | Show/hide |
Query: LIAILTAVCAATIAMVNTITTLLQLEDNRERSSPLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVT
L+ +LT A M+ T+ L+ ++ RH+I++L +F MI+E D CRE+TRMDRR F ILC LLRT GL T+ VD+EEMV +FLH++
Subjt: LIAILTAVCAATIAMVNTITTLLQLEDNRERSSPLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVT
Query: HDKL----EPVTENCTDDRWRWLQ-----------LIDHAIGLR------KGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK
HD+L PVT NC D RW++ + ++ + G R KGEIATNVL VC+ +F++V AGWEGSA DSR+LRDA+S+ L+
Subjt: HDKL----EPVTENCTDDRWRWLQ-----------LIDHAIGLR------KGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK
|
|
| A0A5A7UCU1 Retrotransposon protein | 1.3e-36 | 40.22 | Show/hide |
Query: MDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD------KLEPVTENCTDDRWRWLQLI--DHA-IGLRKGEIATNVLAVCNQSCEFIFVFA
MDRR F ILC LLRT GL T+ VD+EEMVA+FLH++THD + E + D + + +I D A KGE+ATNVL VC+ +FI+V A
Subjt: MDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD------KLEPVTENCTDDRWRWLQLI--DHA-IGLRKGEIATNVLAVCNQSCEFIFVFA
Query: GWEGSAVDSRLLRDAVSKPTELK---PDCANKFSFRWKHPDHA------QELQNIFGRMRRTKSSWSVWTS----VYSLDISELIMELSDLDSG----KH
GWEGSA DSR+LRDA+S+P LK + W + A EL N+ G ++ W + + + +L I + S +DS K
Subjt: GWEGSAVDSRLLRDAVSKPTELK---PDCANKFSFRWKHPDHA------QELQNIFGRMRRTKSSWSVWTS----VYSLDISELIMELSDLDSG----KH
Query: TTDDAAEVTGVFHTGCSGFGWNAKRKGIDCETEIFDVWV---------KSFPFYDDLAIMFGKDRATGSHA
AE+ G CSGFGWN ++K I E E FD W KSFP YD+L+ +FGKDRA G A
Subjt: TTDDAAEVTGVFHTGCSGFGWNAKRKGIDCETEIFDVWV---------KSFPFYDDLAIMFGKDRATGSHA
|
|
| A0A5A7UEC4 Retrotransposon protein | 1.5e-37 | 29.05 | Show/hide |
Query: PLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD-------------------------------
P RH+I++L +F MI+E D CR++TRMDRRTF ILC LLR GL T+ VD+EEMVA+FL ++ HD
Subjt: PLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHD-------------------------------
Query: ------KLEPVTENCTDDRWRWLQLIDHAIGLRKGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK---------------------
+ PVT NC D RW+ + I + RKGEIA NVL VC+ +F++V AGWEGSA DSR+LRDA+S+ L+
Subjt: ------KLEPVTENCTDDRWRWLQLIDHAIGLRKGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK---------------------
Query: ------------------PDCANKFSFRWKHPDHAQELQNIFGRMR------RTKSSWSVWTSVYSLD----------ISELIMELSDLDSGKHTTDDAA
P A ++ F KH ++ FG ++ R KS + V D SE I + ++ D+ A
Subjt: ------------------PDCANKFSFRWKHPDHAQELQNIFGRMR------RTKSSWSVWTSVYSLD----------ISELIMELSDLDSGKHTTDDAA
Query: E---VTGVFHTGCSGFGWNA--------KRKGIDCETEIFDVWVKSFPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDILNNQSPDYENFYIP
E H G G+ A K G + + K FP+YD+L +F +DRAT A T A+V S ++ + + + D+ Y
Subjt: E---VTGVFHTGCSGFGWNA--------KRKGIDCETEIFDVWVKSFPFYDDLAIMFGKDRATGSHATTTAEVDSEPVVEEENKDILNNQSPDYENFYIP
Query: DPPFASSPMSEDIPTTLVVESLGVACHQEWPVVNEDLESRRRRRELYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFP
+ + E I L + + EWP N R E + L+ +P L+ D + R LL+ L FV P
Subjt: DPPFASSPMSEDIPTTLVVESLGVACHQEWPVVNEDLESRRRRRELYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFP
|
|
| A0A5A7VPL4 Retrotransposon protein | 2.4e-35 | 49.08 | Show/hide |
Query: PLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHDKL----EPVTENCTDDRWRWLQLIDHAIG--
P RH+I++L +F MI+E D CR++TRMDRRTF ILC LLR GL T+ VD+EEMVA+FLH++ HD+L PVT NC D RW+ + A+
Subjt: PLIRHQIQKLNFFHMIYEDDHTCRENTRMDRRTFTILCQLLRTTGGLRPTKYVDMEEMVAIFLHLVTHDKL----EPVTENCTDDRWRWLQLIDHAIG--
Query: ---------------LRKGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK
RKGE+ATNVL VC+ +F++V AGWEGSA DSR+LRDA+S+ L+
Subjt: ---------------LRKGEIATNVLAVCNQSCEFIFVFAGWEGSAVDSRLLRDAVSKPTELK
|
|
