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Cla97C10G190790 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G190790
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionRING-type domain-containing protein
Genome locationCla97Chr10:9222734..9223162
RNA-Seq ExpressionCla97C10G190790
SyntenyCla97C10G190790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577374.1 RING-H2 finger protein ATL8, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2149.65Show/hide
Query:  MPIIVIFGFFLTIFVFISFFGLCLYICFQCYNQGFPEGEQRGSGNGETTTTTTTTTTM-MDPEEQNRQTQMAMEKLTKPSAEYDYEENDESPSTLSE---
        M IIVIFG FL I V ++FF LCLYICFQCYN GFPE +   + +GE+TTTTT  T++ +D  E NR  Q+AMEKLTKPS EYDYE+++E+ S LS+   
Subjt:  MPIIVIFGFFLTIFVFISFFGLCLYICFQCYNQGFPEGEQRGSGNGETTTTTTTTTTM-MDPEEQNRQTQMAMEKLTKPSAEYDYEENDESPSTLSE---

Query:  ----------------------------W--INQTCPICRTQL
                                    W  INQTCP+CRTQL
Subjt:  ----------------------------W--INQTCPICRTQL

KAG6600728.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1242.47Show/hide
Query:  MPIIVIFGFFLTIFVFISFFGLCLYICFQCYNQGFPEGEQ--RGSGNGETTTTTTTTTTMMDPEEQNRQTQMAMEKLTKPSAEYDYEEND--ESPSTLSE
        MPIIV+FGF LT+ V  SFF LC+YICFQC+ QGF    Q  R +G+G  T   T   T ++PEE N QT   MEKLT P  +Y  +END   + S L+E
Subjt:  MPIIVIFGFFLTIFVFISFFGLCLYICFQCYNQGFPEGEQ--RGSGNGETTTTTTTTTTMMDPEEQNRQTQMAMEKLTKPSAEYDYEEND--ESPSTLSE

Query:  -------------------------------W--INQTCPICRTQL
                                       W  IN TCPICRT L
Subjt:  -------------------------------W--INQTCPICRTQL

KAG7031368.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1242.47Show/hide
Query:  MPIIVIFGFFLTIFVFISFFGLCLYICFQCYNQGFPEGEQ--RGSGNGETTTTTTTTTTMMDPEEQNRQTQMAMEKLTKPSAEYDYEEND--ESPSTLSE
        MPIIV+FGF LT+ V  SFF LC+YICFQC+ QGF    Q  R +G+G  T   T   T ++PEE N QT   MEKLT P  +Y  +END   + S L+E
Subjt:  MPIIVIFGFFLTIFVFISFFGLCLYICFQCYNQGFPEGEQ--RGSGNGETTTTTTTTTTMMDPEEQNRQTQMAMEKLTKPSAEYDYEEND--ESPSTLSE

Query:  -------------------------------W--INQTCPICRTQL
                                       W  IN TCPICRT L
Subjt:  -------------------------------W--INQTCPICRTQL

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]3.3e-1553.45Show/hide
Query:  CYN-QGFPEGEQRGSGNGETTTTTTT--TTTMMDPEEQNRQTQMAMEKLTKPSAEYDYEENDESPSTLSE------------------------------
        C N  GF E EQRG+ N E T TTTT  TT + DPEE+NRQ QMAMEKLTKPSA Y+ EENDESPSTLSE                              
Subjt:  CYN-QGFPEGEQRGSGNGETTTTTTT--TTTMMDPEEQNRQTQMAMEKLTKPSAEYDYEENDESPSTLSE------------------------------

Query:  -W--INQTCPICRTQL
         W  INQTCPICRT+L
Subjt:  -W--INQTCPICRTQL

TrEMBL top hitse value%identityAlignment
A0A0A0L7Y8 RING-type domain-containing protein2.3e-0665.38Show/hide
Query:  MMDPEEQNRQTQMAMEKLTKPSAEYDYEENDESPSTLSEWINQTCPICRTQL
        ++ P E+NRQ QMAMEKLTKPSA Y+ EENDESPSTLSE     C IC   L
Subjt:  MMDPEEQNRQTQMAMEKLTKPSAEYDYEENDESPSTLSEWINQTCPICRTQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATAATCGTCATCTTTGGCTTTTTCTTGACAATTTTTGTATTCATCTCTTTCTTCGGCTTGTGCCTCTACATCTGTTTCCAATGTTACAACCAGGGGTTCCCAGA
AGGCGAGCAACGTGGTAGTGGGAATGGAGAAACGACGACGACGACAACAACAACAACGACAATGATGGATCCTGAGGAGCAGAATCGTCAGACTCAAATGGCTATGGAGA
AATTGACAAAACCATCAGCAGAGTATGATTACGAGGAAAATGATGAATCTCCATCAACATTGAGTGAATGGATTAATCAAACTTGTCCAATATGTCGAACTCAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCATAATCGTCATCTTTGGCTTTTTCTTGACAATTTTTGTATTCATCTCTTTCTTCGGCTTGTGCCTCTACATCTGTTTCCAATGTTACAACCAGGGGTTCCCAGA
AGGCGAGCAACGTGGTAGTGGGAATGGAGAAACGACGACGACGACAACAACAACAACGACAATGATGGATCCTGAGGAGCAGAATCGTCAGACTCAAATGGCTATGGAGA
AATTGACAAAACCATCAGCAGAGTATGATTACGAGGAAAATGATGAATCTCCATCAACATTGAGTGAATGGATTAATCAAACTTGTCCAATATGTCGAACTCAGTTGTAG
Protein sequenceShow/hide protein sequence
MPIIVIFGFFLTIFVFISFFGLCLYICFQCYNQGFPEGEQRGSGNGETTTTTTTTTTMMDPEEQNRQTQMAMEKLTKPSAEYDYEENDESPSTLSEWINQTCPICRTQL