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Cla97C10G191280 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G191280
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionReverse transcriptase domain-containing protein
Genome locationCla97Chr10:10655811..10658619
RNA-Seq ExpressionCla97C10G191280
SyntenyCla97C10G191280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]6.2e-1643.33Show/hide
Query:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNML----NIHVVSNLGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK
        KA+ EE   ++ IL +Y+E SGQ +N  K +I  +PN   E   +  N+L    N      LG+PS   R+KS+   ++KE++   LAGWK    S+GGK
Subjt:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNML----NIHVVSNLGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK

Query:  KILIKAIAQVIPVYVMSCVL
        +ILIKA+AQ IP Y MSC L
Subjt:  KILIKAIAQVIPVYVMSCVL

XP_023883747.1 uncharacterized protein LOC111996043 [Quercus suber]4.8e-1639.83Show/hide
Query:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK
        KA+ EE DE++ +L+ Y++ S Q +N +K ++  + N   E+ ++  N     ++      LG+PS   RNK    N IKE++ K+LAGWK    S  GK
Subjt:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK

Query:  KILIKAIAQVIPVYVMSC
        ++LIKA+AQ IP Y+MSC
Subjt:  KILIKAIAQVIPVYVMSC

XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber]3.1e-1541.13Show/hide
Query:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK
        KA ++E   +  IL RY+E SGQ +N  K ++  +PN   E+ +   N+L     S     LG+PS   ++K++    +K+R+ K LAGWK    SIGG+
Subjt:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK

Query:  KILIKAIAQVIPVYVMSCV-LPLT
        +ILIKA+AQ +P Y MSC  LP T
Subjt:  KILIKAIAQVIPVYVMSCV-LPLT

XP_023914218.1 uncharacterized protein LOC112025766 [Quercus suber]3.7e-1644.17Show/hide
Query:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPN----VGIEIHKDFGNMLNIHVVSNLGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK
        KAS EE   +K IL++Y+  SGQ +N  K  I  +PN       EI  +   M +      LG+PS+  R+K++   I+KERI + LAGWK    S+GGK
Subjt:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPN----VGIEIHKDFGNMLNIHVVSNLGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK

Query:  KILIKAIAQVIPVYVMSCVL
        +ILIKA+AQ IP Y M C L
Subjt:  KILIKAIAQVIPVYVMSCVL

XP_030479494.1 uncharacterized protein LOC115696748 [Cannabis sativa]3.1e-1539.17Show/hide
Query:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK
        KA+  E   I+++L++++  SGQ VN SK +I  + N  + I  D  N L + +       LG+PS  SRNK+  L  +KER+ K + GW++ F S  GK
Subjt:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK

Query:  KILIKAIAQVIPVYVMSCVL
        ++LIK +AQ +P Y MS  L
Subjt:  KILIKAIAQVIPVYVMSCVL

TrEMBL top hitse value%identityAlignment
A0A5B7C6K9 zf-RVT domain-containing protein3.3e-1541.46Show/hide
Query:  ASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVS----NLGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGKK
        A++E+  EI  I+  Y E SGQ +N  K A+  + NV +    +  N+L + V S     LG+PS   R+K +  NII+ER+ + L GWK    S  G++
Subjt:  ASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVS----NLGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGKK

Query:  ILIKAIAQVIPVYVMSCV-LPLT
        +LIKA+AQ IP Y+MSC  LP+T
Subjt:  ILIKAIAQVIPVYVMSCV-LPLT

A0A6P6U810 uncharacterized protein LOC1137084773.3e-1540.68Show/hide
Query:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVV----SNLGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK
        KA+ +E   I+DIL+ YKE SGQ +NL K A++ + N      +D    LNI  V      LG+P+   R+K +  + IK+RI + + GW   + S GGK
Subjt:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVV----SNLGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK

Query:  KILIKAIAQVIPVYVMSC
        ++L+KA+ Q IP Y MSC
Subjt:  KILIKAIAQVIPVYVMSC

A0A6P6W173 uncharacterized protein LOC1137289353.3e-1538.98Show/hide
Query:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK
        KA +EE  E+  IL+RY++GSGQS+NL K ++  + NV  +  ++    L    V+     LG+P   +R+K +    IK+ I + +A WKN   S GGK
Subjt:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK

Query:  KILIKAIAQVIPVYVMSC
        ++L+KA++  +PVY MSC
Subjt:  KILIKAIAQVIPVYVMSC

A0A7N2L6Z9 Reverse transcriptase domain-containing protein5.2e-1645Show/hide
Query:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK
        KA++EE +++K+IL++Y+  SGQ VN  K +I  +PN   E+ +   N+L     S     LG+PS   R+K      IKER+   LAGWK    S GGK
Subjt:  KASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGK

Query:  KILIKAIAQVIPVYVMSCVL
        +ILIKA+AQ IP Y MSC L
Subjt:  KILIKAIAQVIPVYVMSCVL

A0A803QE56 Uncharacterized protein6.7e-1641.03Show/hide
Query:  ASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGKK
        A++E     K IL++Y + SGQ VN SK  +     V  ++  D   +L + +V N    LG+PS+  RNK +  ++IK R+   L GWK   FS+ GK+
Subjt:  ASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSN----LGIPSYFSRNKSKDLNIIKERIHKMLAGWKNGFFSIGGKK

Query:  ILIKAIAQVIPVYVMSC
        +LIKAI Q IP Y MSC
Subjt:  ILIKAIAQVIPVYVMSC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGGATGTGGACCCACTTGAAAGTTTGGAATCTCATGCCAATGGGTCTTACGAAGTTGTAGGTGTCGGGCCTTCTACTGCTGACAAGGCTTCAAAAGAGGAGGG
TGATGAGATAAAAGATATTTTGAAGCGTTACAAAGAGGGTTCGGGTCAGAGTGTCAATCTTTCTAAATTAGCTATTTTGTGCAACCCAAATGTTGGGATTGAAATTCACA
AGGATTTTGGGAATATGCTCAATATTCATGTTGTATCTAATCTGGGCATTCCTTCCTACTTCTCTAGAAATAAGTCTAAAGACCTCAACATTATCAAAGAAAGAATTCAT
AAGATGTTAGCTGGATGGAAGAATGGTTTCTTTTCGATAGGGGGTAAGAAAATTCTCATCAAGGCTATTGCTCAGGTTATTCCAGTTTATGTAATGTCATGTGTCCTCCC
TCTCACTTATGTGCTAAGCTATCTCGATGCATGGCTTGCTTTTGGTGGGGTTCTTCCTCGAACAAGTTCAAAATACATTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGGATGTGGACCCACTTGAAAGTTTGGAATCTCATGCCAATGGGTCTTACGAAGTTGTAGGTGTCGGGCCTTCTACTGCTGACAAGGCTTCAAAAGAGGAGGG
TGATGAGATAAAAGATATTTTGAAGCGTTACAAAGAGGGTTCGGGTCAGAGTGTCAATCTTTCTAAATTAGCTATTTTGTGCAACCCAAATGTTGGGATTGAAATTCACA
AGGATTTTGGGAATATGCTCAATATTCATGTTGTATCTAATCTGGGCATTCCTTCCTACTTCTCTAGAAATAAGTCTAAAGACCTCAACATTATCAAAGAAAGAATTCAT
AAGATGTTAGCTGGATGGAAGAATGGTTTCTTTTCGATAGGGGGTAAGAAAATTCTCATCAAGGCTATTGCTCAGGTTATTCCAGTTTATGTAATGTCATGTGTCCTCCC
TCTCACTTATGTGCTAAGCTATCTCGATGCATGGCTTGCTTTTGGTGGGGTTCTTCCTCGAACAAGTTCAAAATACATTGGATGA
Protein sequenceShow/hide protein sequence
MELDVDPLESLESHANGSYEVVGVGPSTADKASKEEGDEIKDILKRYKEGSGQSVNLSKLAILCNPNVGIEIHKDFGNMLNIHVVSNLGIPSYFSRNKSKDLNIIKERIH
KMLAGWKNGFFSIGGKKILIKAIAQVIPVYVMSCVLPLTYVLSYLDAWLAFGGVLPRTSSKYIG