; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C10G191345 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G191345
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
Genome locationCla97Chr10:10891235..10891477
RNA-Seq ExpressionCla97C10G191345
SyntenyCla97C10G191345
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024177931.1 uncharacterized protein LOC112183838 [Rosa chinensis]7.3e-0432.91Show/hide
Query:  TEAYAMLFGFQQVHEWGFFVFFIELDSQILVNAIHEGNLNGSPYGVIIEEIREWMTKSNSVGINFIPRGENGVAYKLAE
        TE  A++ G Q     GF    +E D Q+LV  +    L+ S  G ++ +++E +   +S  +NF+ R  N VA+KLA+
Subjt:  TEAYAMLFGFQQVHEWGFFVFFIELDSQILVNAIHEGNLNGSPYGVIIEEIREWMTKSNSVGINFIPRGENGVAYKLAE
XP_042941317.1 uncharacterized protein LOC122275981 [Carya illinoinensis]7.3e-0438.46Show/hide
Query:  EWGFFVFFIELDSQILVNAIHEGNLNGSPYGVIIEEIREWMTKSNSVGINFIPRGENGVAYKLAE
        E GF    +E DSQ++VNA++      + YG IIE++R+ + +  + G+ F+ R  NG+A+KLA+
Subjt:  EWGFFVFFIELDSQILVNAIHEGNLNGSPYGVIIEEIREWMTKSNSVGINFIPRGENGVAYKLAE
XP_042958055.1 uncharacterized protein LOC122293570 [Carya illinoinensis]7.3e-0438.46Show/hide
Query:  EWGFFVFFIELDSQILVNAIHEGNLNGSPYGVIIEEIREWMTKSNSVGINFIPRGENGVAYKLAE
        E GF    +E DSQ++VNA++      + YG IIE++R+ + +  + G+ F+ R  NG+A+KLA+
Subjt:  EWGFFVFFIELDSQILVNAIHEGNLNGSPYGVIIEEIREWMTKSNSVGINFIPRGENGVAYKLAE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAAGCATATGCTATGCTCTTTGGTTTTCAACAAGTGCATGAATGGGGCTTTTTTGTGTTTTTTATTGAATTAGATTCTCAAATCCTTGTTAATGCTATCCATGA
GGGTAATCTTAATGGATCTCCTTATGGAGTGATTATTGAGGAAATTAGAGAGTGGATGACAAAAAGTAATTCAGTTGGGATAAATTTTATCCCGAGGGGTGAGAATGGTG
TGGCTTACAAGTTAGCTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGAAGCATATGCTATGCTCTTTGGTTTTCAACAAGTGCATGAATGGGGCTTTTTTGTGTTTTTTATTGAATTAGATTCTCAAATCCTTGTTAATGCTATCCATGA
GGGTAATCTTAATGGATCTCCTTATGGAGTGATTATTGAGGAAATTAGAGAGTGGATGACAAAAAGTAATTCAGTTGGGATAAATTTTATCCCGAGGGGTGAGAATGGTG
TGGCTTACAAGTTAGCTGAGTGA
Protein sequenceShow/hide protein sequence
MTEAYAMLFGFQQVHEWGFFVFFIELDSQILVNAIHEGNLNGSPYGVIIEEIREWMTKSNSVGINFIPRGENGVAYKLAE