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Cla97C10G191400 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G191400
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionRetrotransposon protein
Genome locationCla97Chr10:11147360..11147922
RNA-Seq ExpressionCla97C10G191400
SyntenyCla97C10G191400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]1.4e-2541.78Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K L  +IQV+PNLES V+ LK+QY  + +M+GP C GF WN E+KCI+ E  + +  +K H +A+ L +K F  + DL IVFG+DRAT  +  T  
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGP
        E+GS+   + E DD++ N     ++F IP+P   + P+ ED+   P
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGP

TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]3.0e-2542.96Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K    +IQV+ NLES+V+ LK+QY A+ KM+GP C  FGWN E+KCI+ E  +FD  +K HP+A+ L +K F+ + DL IVFG+D+AT  R     
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL
        E+ S+   + E DD+  N     ++F IP+P   + P+ ED+
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL

TYK26842.1 uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]1.4e-2541.78Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K L  +IQV+PNLES V+ LK+QY  + +M+GP C GF WN E+KCI+ E  + +  +K H +A+ L +K F  + DL IVFG+DRAT  +  T  
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGP
        E+GS+   + E DD++ N     ++F IP+P   + P+ ED+   P
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGP

XP_008455678.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]3.0e-2542.96Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K    +IQV+ NLES+V+ LK+QY A+ KM+GP C  FGWN E+KCI+ E  +FD  +K HP+A+ L +K F+ + DL IVFG+D+AT  R     
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL
        E+ S+   + E DD+  N     ++F IP+P   + P+ ED+
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL

XP_031741735.1 uncharacterized protein At2g29880-like [Cucumis sativus]1.4e-2543.66Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K  G +IQV+PNLE +V+ LK+QY A+ +M+GP C  FGWN ++KCI+ E  +FD  +K HP+A+ L +K F  + DL IVFG+DRAT  R  T  
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL
        E+ S    + E DD+  N     ++F IP+P   + P+ ED+
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL

TrEMBL top hitse value%identityAlignment
A0A1S3C252 uncharacterized protein At2g29880-like1.5e-2542.96Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K    +IQV+ NLES+V+ LK+QY A+ KM+GP C  FGWN E+KCI+ E  +FD  +K HP+A+ L +K F+ + DL IVFG+D+AT  R     
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL
        E+ S+   + E DD+  N     ++F IP+P   + P+ ED+
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL

A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein6.6e-2641.78Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K L  +IQV+PNLES V+ LK+QY  + +M+GP C GF WN E+KCI+ E  + +  +K H +A+ L +K F  + DL IVFG+DRAT  +  T  
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGP
        E+GS+   + E DD++ N     ++F IP+P   + P+ ED+   P
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGP

A0A5A7VHM3 Retrotransposon protein4.7e-2450Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        MM +K  GC ++ +  ++ +++TLKR + A+ +M GP C GFGWN E+KCI  E E+FD  ++SHP+AKEL +K FS YD+L  VFG+DRAT   A T A
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGS
        ++GS
Subjt:  EIGS

A0A5D3BC95 Retrotransposon protein1.5e-2542.96Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K    +IQV+ NLES+V+ LK+QY A+ KM+GP C  FGWN E+KCI+ E  +FD  +K HP+A+ L +K F+ + DL IVFG+D+AT  R     
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL
        E+ S+   + E DD+  N     ++F IP+P   + P+ ED+
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDL

A0A5D3DTL0 Myb_DNA-bind_3 domain-containing protein6.6e-2641.78Show/hide
Query:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA
        +M++K L  +IQV+PNLES V+ LK+QY  + +M+GP C GF WN E+KCI+ E  + +  +K H +A+ L +K F  + DL IVFG+DRAT  +  T  
Subjt:  MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTA

Query:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGP
        E+GS+   + E DD++ N     ++F IP+P   + P+ ED+   P
Subjt:  EIGSKPVVEEENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein5.2e-0733.7Show/hide
Query:  KFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRA
        K LGC+ +   N  S+++ LK  Y +    L     GFGW+ E K      E++   +K+HP+ K ++ +S   ++DL I+FG   AT S A
Subjt:  KFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRA

AT2G24960.1 unknown protein2.4e-0431.25Show/hide
Query:  GFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVF------GKDRATRSRATTTAEIGSKPVVEEENDD
        GF W+  +  I  +  ++D+ IK HP A+  R KS   Y+DL  +F      G D      A  T+E  +    +E+N D
Subjt:  GFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVF------GKDRATRSRATTTAEIGSKPVVEEENDD

AT2G24960.2 unknown protein2.4e-0431.25Show/hide
Query:  GFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVF------GKDRATRSRATTTAEIGSKPVVEEENDD
        GF W+  +  I  +  ++D+ IK HP A+  R KS   Y+DL  +F      G D      A  T+E  +    +E+N D
Subjt:  GFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVF------GKDRATRSRATTTAEIGSKPVVEEENDD

AT5G27260.1 unknown protein2.8e-0828.78Show/hide
Query:  SKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTAEIGSKPVVEEENDDILNN
        S+++ LK QY +    L     GFGW+   K      E++   +K+HP+ K+LR+ +F  +D+L I+FG+  AT   A    +  +  +     ++    
Subjt:  SKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTAEIGSKPVVEEENDDILNN

Query:  QSPDFDNFYIPD-----------PPFADLPTSEDLKRGP
           DFDN Y  D            PF    TSE  K  P
Subjt:  QSPDFDNFYIPD-----------PPFADLPTSEDLKRGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCAACAAAAATTTCTAGGGTGTTCCATACAAGTAAGCCCAAATCTAGAGTCCAAGGTGAGGACGTTGAAGAGACAATACAATGCGGTCCCTAAAATGTTGGGCCC
AGGGTGTGGTGGGTTTGGTTGGAACGCGGAGCAGAAATGTATCGACTATGAGCCTGAGATATTTGACGCATGCATCAAGAGTCATCCGAGTGCAAAAGAACTCAGGCATA
AGTCATTTTCAATCTATGATGACCTGATGATTGTATTTGGCAAAGACAGAGCAACAAGGAGTCGTGCCACTACCACTGCTGAGATCGGATCTAAACCTGTAGTGGAAGAG
GAGAACGACGACATTTTAAATAACCAATCCCCAGACTTTGATAATTTCTACATTCCTGATCCACCATTCGCCGACTTGCCCACATCAGAAGACCTTAAGAGGGGACCCGT
TCATCCCTTTTCTTTCAAAAAGATTCTCCTGGAATTGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCAACAAAAATTTCTAGGGTGTTCCATACAAGTAAGCCCAAATCTAGAGTCCAAGGTGAGGACGTTGAAGAGACAATACAATGCGGTCCCTAAAATGTTGGGCCC
AGGGTGTGGTGGGTTTGGTTGGAACGCGGAGCAGAAATGTATCGACTATGAGCCTGAGATATTTGACGCATGCATCAAGAGTCATCCGAGTGCAAAAGAACTCAGGCATA
AGTCATTTTCAATCTATGATGACCTGATGATTGTATTTGGCAAAGACAGAGCAACAAGGAGTCGTGCCACTACCACTGCTGAGATCGGATCTAAACCTGTAGTGGAAGAG
GAGAACGACGACATTTTAAATAACCAATCCCCAGACTTTGATAATTTCTACATTCCTGATCCACCATTCGCCGACTTGCCCACATCAGAAGACCTTAAGAGGGGACCCGT
TCATCCCTTTTCTTTCAAAAAGATTCTCCTGGAATTGGAATAG
Protein sequenceShow/hide protein sequence
MMQQKFLGCSIQVSPNLESKVRTLKRQYNAVPKMLGPGCGGFGWNAEQKCIDYEPEIFDACIKSHPSAKELRHKSFSIYDDLMIVFGKDRATRSRATTTAEIGSKPVVEE
ENDDILNNQSPDFDNFYIPDPPFADLPTSEDLKRGPVHPFSFKKILLELE