CuGenDBv2

Gene ID	Cla97C10G191580
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	ATP synthase subunit a, chloroplastic
Genome location	Cla97Chr10:13135797..13138119
RNA-Seq Expression	Cla97C10G191580
Synteny	Cla97C10G191580
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR000568 - ATP synthase, F0 complex, subunit A IPR035908 - ATP synthase, F0 complex, subunit A superfamily IPR045082 - ATP synthase, F0 complex, subunit A, bacterial/chloroplast

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88818.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

1.3e-56

99.11

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGLSYF
Subjt:  YAGLSKKGLSYF

AHM91176.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

1.3e-56

99.11

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGLSYF
Subjt:  YAGLSKKGLSYF

KAB2605738.1 ATP synthase CF0 subunit IV [Pyrus ussuriensis x Pyrus communis]

1.2e-57

86.57

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAI+AVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYFE--TTPSSLSYMLNTSLCLSSL
        YAGL+KKGL YFE  T P SLS+ L  ++    L
Subjt:  YAGLSKKGLSYFE--TTPSSLSYMLNTSLCLSSL

YP_009326405.1 ATP synthase CF0 A chain [Rosa roxburghii]

1.3e-56

99.11

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGLSYF
Subjt:  YAGLSKKGLSYF

YP_009752654.1 CF0 subunit IV [Ampelosycios humblotii]

1.3e-56

99.11

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGLSYF
Subjt:  YAGLSKKGLSYF

TrEMBL top hits

e value

%identity

Alignment

A0A0E0EPX3 30S ribosomal protein S2, chloroplastic

2.2e-57

90.08

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Query:  INGRLHWYLFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALA
        +    +W + GS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALA
Subjt:  INGRLHWYLFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALA

Query:  LLTSVAYFYAGLSKKGLSYFE
        LLTS AYFYAGLSKKGLSYFE
Subjt:  LLTSVAYFYAGLSKKGLSYFE

A0A218KG29 ATP synthase subunit a, chloroplastic

6.4e-57

99.11

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGLSYF
Subjt:  YAGLSKKGLSYF

A0A5N5FRH8 ATP synthase CF0 subunit IV

5.8e-58

86.57

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAI+AVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYFE--TTPSSLSYMLNTSLCLSSL
        YAGL+KKGL YFE  T P SLS+ L  ++    L
Subjt:  YAGLSKKGLSYFE--TTPSSLSYMLNTSLCLSSL

A0A7H1JG22 ATP synthase subunit a, chloroplastic

6.4e-57

99.11

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGLSYF
Subjt:  YAGLSKKGLSYF

G3ETX3 ATP synthase subunit a, chloroplastic

6.4e-57

99.11

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Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGLSYF
Subjt:  YAGLSKKGLSYF

SwissProt top hits

e value

%identity

Alignment

P0C2Y5 ATP synthase subunit a, chloroplastic

8.6e-59

96.46

Show/hide

Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTS AYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYFE
        YAGLSKKGLSYFE
Subjt:  YAGLSKKGLSYFE

P0C2Y6 ATP synthase subunit a, chloroplastic

8.6e-59

96.46

Show/hide

Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTS AYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYFE
        YAGLSKKGLSYFE
Subjt:  YAGLSKKGLSYFE

P0C2Y7 ATP synthase subunit a, chloroplastic

8.6e-59

96.46

Show/hide

Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTS AYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYFE
        YAGLSKKGLSYFE
Subjt:  YAGLSKKGLSYFE

P17344 ATP synthase subunit a, chloroplastic

1.9e-58

95.58

Show/hide

Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS AYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYFE
        YAGLSKKGLSYFE
Subjt:  YAGLSKKGLSYFE

Q4VZP5 ATP synthase subunit a, chloroplastic

1.7e-59

99.11

Show/hide

Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGLSYF
Subjt:  YAGLSKKGLSYF

Arabidopsis top hits

e value

%identity

Alignment

ATCG00150.1 ATPase, F0 complex, subunit A protein

5.7e-58

92.86

Show/hide

Query:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF
        L GSA++A+RNPQTIPTDGQNFFE+VLEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWKIIQLP GELAAPTNDINTTVALALLTSVAYF
Subjt:  LFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYF

Query:  YAGLSKKGLSYF
        YAGLSKKGL YF
Subjt:  YAGLSKKGLSYF

Sequences

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CDS sequence

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ATGGCTGTACTACCGCTCCTGGTCTTCGAACTAGTCATTAATGGTCGGCTTCATTGGTATCTTTTCGGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCATTCCTAC
TGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGACGTGAGCAAAACTCAGATTGGCGAAGAATATGGTCCATGGGTTCCCTTTATTGGAACTATGTTTC
TATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCT
TTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGAGACAACCCCGTCTTCTCTTAGCTATATGCTAAACACTAGTCT
TTGCCTTTCATCGCTGCGTTCCGGGTTAAGAAGAAAAGAAGCGCAAACAATCGAAGTACGAAGAGACGAAGCTGCTGCGAGGACAAGTGGAAACCCATGCGTCGAGTCGA
TGCGCTGA

mRNA sequence

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Protein sequence

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MAVLPLLVFELVINGRLHWYLFGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA
LALLTSVAYFYAGLSKKGLSYFETTPSSLSYMLNTSLCLSSLRSGLRRKEAQTIEVRRDEAAARTSGNPCVESMR

Cla97C10G191580 (gene) of Watermelon (97103) v2.5 genome