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Cla97C10G191775 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G191775
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description30S ribosomal protein S8, chloroplastic
Genome locationCla97Chr10:15081338..15081700
RNA-Seq ExpressionCla97C10G191775
SyntenyCla97C10G191775
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000630 - Ribosomal protein S8
IPR035987 - Ribosomal protein S8 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM91246.1 ribosomal protein S8 [Lagenaria siceraria]7.4e-0997.22Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
QHB75999.1 ribosomal protein S8 [Cucumis melo subsp. melo]4.3e-0992.5Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIVTGLV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV  LV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIVTGLV
YP_009236314.1 ribosomal protein S8 [Gynostemma pentaphyllum]7.4e-0997.22Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
YP_009431592.1 ribosomal protein S8 [Citrullus amarus]7.4e-0997.22Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
YP_009525221.1 ribosomal protein S8 [Hodgsonia macrocarpa]7.4e-0997.22Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
TrEMBL top hitse value%identityAlignment
A0A109WXX2 30S ribosomal protein S8, chloroplastic3.6e-0997.22Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
A0A1S4EU50 30S ribosomal protein S8, chloroplastic3.6e-0997.22Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
A0A249RZ88 30S ribosomal protein S8, chloroplastic3.6e-0997.22Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
A0A6B9M1H6 30S ribosomal protein S8, chloroplastic2.1e-0992.5Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIVTGLV
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV  LV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIVTGLV
A0A6H0ETL0 30S ribosomal protein S8, chloroplastic3.6e-0971.93Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV-----TGLVCLVEVSRVSTAD
        MGKDTIANIITSI NADMNRKGMVRIPSTNITENIV      G +  V   R ST D
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV-----TGLVCLVEVSRVSTAD
SwissProt top hitse value%identityAlignment
A4QL54 30S ribosomal protein S8, chloroplastic1.2e-0988.89Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIA+IITSI NADMNRKGMVRI STNITE+IV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
Q09ME2 30S ribosomal protein S8, chloroplastic2.0e-0986.11Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIA+IITSI NADMNRKG VRI STNITEN+V
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
Q14FC2 30S ribosomal protein S8, chloroplastic3.5e-0980.56Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MG+DT+A+IITSI NADM+RKG VRIPSTNITENI+
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
Q42362 30S ribosomal protein S8, chloroplastic (Fragment)3.5e-0986.11Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIA+IITSI NADMN+KG VRI STNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
Q4VZK0 30S ribosomal protein S8, chloroplastic2.2e-1194.44Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIANIITSI NADMNRKGMVRIP+TNITENIV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
Arabidopsis top hitse value%identityAlignment
ATCG00770.1 ribosomal protein S85.5e-1086.11Show/hide
Query:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV
        MGKDTIA+IITSI NADMNRKG VRI STNITE+IV
Subjt:  MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCACAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAC
CGGTTTAGTCTGCCTTGTGGAGGTCTCTCGGGTGTCTACGGCAGATTCGATCAGTCTCGTGATGTTGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCACAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAC
CGGTTTAGTCTGCCTTGTGGAGGTCTCTCGGGTGTCTACGGCAGATTCGATCAGTCTCGTGATGTTGGAATAG
Protein sequenceShow/hide protein sequence
MGKDTIANIITSIHNADMNRKGMVRIPSTNITENIVTGLVCLVEVSRVSTADSISLVMLE