; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C10G191965 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G191965
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionZf-CCHC domain-containing protein
Genome locationCla97Chr10:17543184..17544418
RNA-Seq ExpressionCla97C10G191965
SyntenyCla97C10G191965
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR021109 - Aspartic peptidase domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047078.1 reverse transcriptase [Cucumis melo var. makuwa]3.8e-3039.38Show/hide
Query:  ARNNLAESENQHIAR---------------TGKRIPRDETSSQNRRQSQDTSKGQIVASTSNTKGKEVH------GNKSKINPKGSSNSLHQKKPNHYNR
        AR NL+E+E   IAR                  R   +  S     +  +  + +  ++++  KGKEV         K ++  KG       K  N YNR
Subjt:  ARNNLAESENQHIAR---------------TGKRIPRDETSSQNRRQSQDTSKGQIVASTSNTKGKEVH------GNKSKINPKGSSNSLHQKKPNHYNR

Query:  PNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEEND--SDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSS
        P+LG CFRCGQ GH SN CPQR+ + + +K+E+   E ++   ++ +    D+G  +SCV+QRVLL P  +TNPQ H+ F+  CTINGK+C+VI+D+GSS
Subjt:  PNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEEND--SDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSS

Query:  ENMVSKMLVSALKLKVDSHPSPDKVG
        EN V+K LV+AL LK + HP+P K+G
Subjt:  ENMVSKMLVSALKLKVDSHPSPDKVG

TYK16316.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]5.0e-3040.56Show/hide
Query:  SSQNRRQSQDTSKGQIVASTSNTKGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKE--ENDSDDI
        ++ +++QS      +  +++   KGK +   ++    K   + +  K  N+Y RP+LG CFRCG+  HLSN CPQR+ + + E ++ +  E    + ++ 
Subjt:  SSQNRRQSQDTSKGQIVASTSNTKGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKE--ENDSDDI

Query:  EYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG
        E    D+   +SC++QRVL+TP  +TNPQRH  F+  CTINGK+C+VI++SGSSEN V++ LV+AL LK D HP P K+G
Subjt:  EYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG

TYK23145.1 hypothetical protein E5676_scaffold142G001540 [Cucumis melo var. makuwa]3.8e-3049.29Show/hide
Query:  SNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEEND--SDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTI
        S+  + K  N+YNRP+LG CFRCGQ+GHLS  C QR+ + + +++E+   E ++   ++ E    D+G  +SCV+QRVL+ P  +TNPQRH+ F+  CTI
Subjt:  SNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEEND--SDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTI

Query:  NGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG
        NGK+C+VI+DS SSEN V+K LV+AL LK + H +P K+G
Subjt:  NGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG

XP_031741035.1 uncharacterized protein LOC116403692 [Cucumis sativus]1.0e-3039.3Show/hide
Query:  NLAESENQHIARTGKRIPRDETSSQNRRQSQDTSKGQIVASTSNTKGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRN
        + AE+  + IA   K + R      N  +S+   +    ++++  KGKE+   +  +  K    +      N Y+RP+LG CFRCGQTGHLS+ CPQR+ 
Subjt:  NLAESENQHIARTGKRIPRDETSSQNRRQSQDTSKGQIVASTSNTKGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRN

Query:  LTIQEKQEEFNKEENDS-DDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKV
        + I E+  + +++  ++ ++ E    D+G+ +SCV+QR+L+TP  + N QRH  F+  CTING++C+VI+DSGSSEN V+K LV+ L LK ++HP+P K+
Subjt:  LTIQEKQEEFNKEENDS-DDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKV

Query:  G
        G
Subjt:  G

XP_031744062.1 uncharacterized protein LOC116404773 [Cucumis sativus]7.0e-3242.06Show/hide
Query:  TARNNLAESENQHIAR----TGKRIPRDETSSQNRRQSQDT----SKGQIVASTSNT-KGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQ
        +AR NL+E+E   +AR    T + +    + + NRR + +T    SK     STS   KGKEV   +  +  K    +      N Y+RP+LG CFRCGQ
Subjt:  TARNNLAESENQHIAR----TGKRIPRDETSSQNRRQSQDT----SKGQIVASTSNT-KGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQ

Query:  TGHLSNECPQRRNLTIQEKQEEFNKEENDS-DDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSAL
        TGHLSN CPQR+ + I E+  + +++  ++ ++ E    D+G+ +SC +QRVL+ P  + N QRH  F+  CTING++C+VI+DSGSSEN V+K LV  L
Subjt:  TGHLSNECPQRRNLTIQEKQEEFNKEENDS-DDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSAL

Query:  KLKVDSHPSPDKVG
         LK ++HP+P K+G
Subjt:  KLKVDSHPSPDKVG

TrEMBL top hitse value%identityAlignment
A0A5A7UXS4 CCHC-type domain-containing protein4.1e-3040.55Show/hide
Query:  TARNNLAESENQHIAR----TGKRIPRDETSSQNRRQS--QDTSKGQIVASTSNTKGKEVHGNKSK-----INPKGSSNSLHQKKPNHYNRPNLGTCFRC
        +AR NL E+E   IAR    T + +      S NR+ +   + SK Q  +S +N +     G KSK        K   N+   K  N Y RP+L  CFRC
Subjt:  TARNNLAESENQHIAR----TGKRIPRDETSSQNRRQS--QDTSKGQIVASTSNTKGKEVHGNKSK-----INPKGSSNSLHQKKPNHYNRPNLGTCFRC

Query:  GQTGHLSNECPQRRNLTIQEKQEEFNKEEN--DSDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLV
        GQ+GHLSN CPQR  +++ +K+     E++  + ++ E+   D+G  +S V+QRVL+ P  +TNPQRH+ F+  CTIN ++C+VI+DSGSSEN V++ LV
Subjt:  GQTGHLSNECPQRRNLTIQEKQEEFNKEEN--DSDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLV

Query:  SALKLKVDSHPSPDKVG
        + L LK + +P+P K+G
Subjt:  SALKLKVDSHPSPDKVG

A0A5A7V462 Zf-CCHC domain-containing protein4.1e-3040Show/hide
Query:  SSQNRRQSQDTSKGQIVASTSNTKGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKE--ENDSDDI
        ++ +++QS      +  +++   KGK +   ++    K   + +  K  N+Y RP+LG CFRCG+  HLSN CPQR+ + + E ++ +  E    + ++ 
Subjt:  SSQNRRQSQDTSKGQIVASTSNTKGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKE--ENDSDDI

Query:  EYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG
        E    ++   +SC++QRVL+TP  +TNPQRH+ F+  CTINGK+C+VI++SGSSEN V++ LV+AL LK D HP P K+G
Subjt:  EYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG

A0A5D3C3X9 Reverse transcriptase1.9e-3039.38Show/hide
Query:  ARNNLAESENQHIAR---------------TGKRIPRDETSSQNRRQSQDTSKGQIVASTSNTKGKEVH------GNKSKINPKGSSNSLHQKKPNHYNR
        AR NL+E+E   IAR                  R   +  S     +  +  + +  ++++  KGKEV         K ++  KG       K  N YNR
Subjt:  ARNNLAESENQHIAR---------------TGKRIPRDETSSQNRRQSQDTSKGQIVASTSNTKGKEVH------GNKSKINPKGSSNSLHQKKPNHYNR

Query:  PNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEEND--SDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSS
        P+LG CFRCGQ GH SN CPQR+ + + +K+E+   E ++   ++ +    D+G  +SCV+QRVLL P  +TNPQ H+ F+  CTINGK+C+VI+D+GSS
Subjt:  PNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEEND--SDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSS

Query:  ENMVSKMLVSALKLKVDSHPSPDKVG
        EN V+K LV+AL LK + HP+P K+G
Subjt:  ENMVSKMLVSALKLKVDSHPSPDKVG

A0A5D3D0X3 Zf-CCHC domain-containing protein2.4e-3040.56Show/hide
Query:  SSQNRRQSQDTSKGQIVASTSNTKGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKE--ENDSDDI
        ++ +++QS      +  +++   KGK +   ++    K   + +  K  N+Y RP+LG CFRCG+  HLSN CPQR+ + + E ++ +  E    + ++ 
Subjt:  SSQNRRQSQDTSKGQIVASTSNTKGKEVHGNKSKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKE--ENDSDDI

Query:  EYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG
        E    D+   +SC++QRVL+TP  +TNPQRH  F+  CTINGK+C+VI++SGSSEN V++ LV+AL LK D HP P K+G
Subjt:  EYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG

A0A5D3DHT9 CCHC-type domain-containing protein1.9e-3049.29Show/hide
Query:  SNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEEND--SDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTI
        S+  + K  N+YNRP+LG CFRCGQ+GHLS  C QR+ + + +++E+   E ++   ++ E    D+G  +SCV+QRVL+ P  +TNPQRH+ F+  CTI
Subjt:  SNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEEND--SDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTI

Query:  NGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG
        NGK+C+VI+DS SSEN V+K LV+AL LK + H +P K+G
Subjt:  NGKICNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGAATCTCCCCCTCGTTTCCAGAATCACCCCTATAGATATCAGGATCCTAATTTATGATATCAAGATAATCAATTACCTTTTCAAGAACCCTATGAAGAATTG
GGAAATTTCAGACCGAATGCCCAAGAATAATTCCAAGAATAATTCCACCGCAAGGAACAATTTGGCTGAGAGCGAAAATCAACATATTGCAAGGACAGGGAAAAGAATCC
CTCGGGATGAAACATCTAGCCAAAACAGAAGGCAATCTCAAGATACTTCCAAAGGGCAGATTGTGGCTTCCACATCCAATACTAAAGGAAAAGAAGTTCATGGCAACAAA
TCTAAGATCAATCCAAAGGGAAGTTCTAATTCTTTACACCAAAAGAAACCTAATCATTATAATAGACCTAATCTTGGTACGTGTTTTAGGTGTGGACAAACTGGACACTT
ATCCAATGAATGTCCACAAAGAAGAAACCTTACCATTCAAGAGAAGCAAGAAGAGTTCAACAAGGAAGAAAATGACAGCGATGACATTGAATATACTAATCCAGATGAAG
GAAAGGAGTTGTCTTGTGTCCTTCAACGTGTTCTTCTCACACCAATAACAAAAACTAATCCTCAGAGACATGCTCCGTTTCAAGCACATTGTACCATCAATGGCAAAATT
TGCAATGTAATAGTTGATAGTGGTAGCAGTGAAAATATGGTTTCCAAAATGCTTGTCTCGGCTCTTAAATTGAAAGTTGATTCCCATCCAAGTCCTGACAAGGTGGGTTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGAATCTCCCCCTCGTTTCCAGAATCACCCCTATAGATATCAGGATCCTAATTTATGATATCAAGATAATCAATTACCTTTTCAAGAACCCTATGAAGAATTG
GGAAATTTCAGACCGAATGCCCAAGAATAATTCCAAGAATAATTCCACCGCAAGGAACAATTTGGCTGAGAGCGAAAATCAACATATTGCAAGGACAGGGAAAAGAATCC
CTCGGGATGAAACATCTAGCCAAAACAGAAGGCAATCTCAAGATACTTCCAAAGGGCAGATTGTGGCTTCCACATCCAATACTAAAGGAAAAGAAGTTCATGGCAACAAA
TCTAAGATCAATCCAAAGGGAAGTTCTAATTCTTTACACCAAAAGAAACCTAATCATTATAATAGACCTAATCTTGGTACGTGTTTTAGGTGTGGACAAACTGGACACTT
ATCCAATGAATGTCCACAAAGAAGAAACCTTACCATTCAAGAGAAGCAAGAAGAGTTCAACAAGGAAGAAAATGACAGCGATGACATTGAATATACTAATCCAGATGAAG
GAAAGGAGTTGTCTTGTGTCCTTCAACGTGTTCTTCTCACACCAATAACAAAAACTAATCCTCAGAGACATGCTCCGTTTCAAGCACATTGTACCATCAATGGCAAAATT
TGCAATGTAATAGTTGATAGTGGTAGCAGTGAAAATATGGTTTCCAAAATGCTTGTCTCGGCTCTTAAATTGAAAGTTGATTCCCATCCAAGTCCTGACAAGGTGGGTTG
A
Protein sequenceShow/hide protein sequence
MVKNLPLVSRITPIDIRILIYDIKIINYLFKNPMKNWEISDRMPKNNSKNNSTARNNLAESENQHIARTGKRIPRDETSSQNRRQSQDTSKGQIVASTSNTKGKEVHGNK
SKINPKGSSNSLHQKKPNHYNRPNLGTCFRCGQTGHLSNECPQRRNLTIQEKQEEFNKEENDSDDIEYTNPDEGKELSCVLQRVLLTPITKTNPQRHAPFQAHCTINGKI
CNVIVDSGSSENMVSKMLVSALKLKVDSHPSPDKVG