; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C10G192200 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G192200
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description50S ribosomal protein L23
Genome locationCla97Chr10:18455137..18457128
RNA-Seq ExpressionCla97C10G192200
SyntenyCla97C10G192200
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR013025 - Ribosomal protein L25/L23


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137193.1 uncharacterized protein LOC101221365 [Cucumis sativus]3.3e-8594.8Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKV+TLNMEGKKKKRGG+LIAKPDYKKAYVTLRNPLSISPD+YP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRT-DGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAK+HWLHEKEPVG+KTYKGFADRGRRR+  GAETVEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRT-DGAETVEPSTKFPWSSMRSG

XP_022929525.1 uncharacterized protein LOC111436066 [Cucurbita moschata]5.7e-8595.35Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG K YKGF++R RRRT  AETVEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG

XP_022943267.1 uncharacterized protein LOC111448049 [Cucurbita moschata]4.4e-8595.93Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        M SRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKE VGLKTYKGFADRGRRR  GAE VEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG

XP_023531609.1 uncharacterized protein LOC111793793 [Cucurbita pepo subsp. pepo]4.0e-8696.51Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKE VGLKTYKGFADRGRRR  GAE VEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG

XP_038905477.1 uncharacterized protein LOC120091488 [Benincasa hispida]1.1e-8596.51Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG
        IRIIEEDK+NMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRR   GAETVE STKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG

TrEMBL top hitse value%identityAlignment
A0A0A0L0J2 Uncharacterized protein1.6e-8594.8Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKV+TLNMEGKKKKRGG+LIAKPDYKKAYVTLRNPLSISPD+YP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRT-DGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAK+HWLHEKEPVG+KTYKGFADRGRRR+  GAETVEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRT-DGAETVEPSTKFPWSSMRSG

A0A5D3CZJ7 Nucleotide-binding, alpha-beta plait8.0e-8594.8Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGF+VDKVRTLNMEGKKKKRGG+LIAKPDYKKAYVTLRNPLSIS D+YP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRT-DGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG+KTYKGFADRGRRR   GAETVEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRT-DGAETVEPSTKFPWSSMRSG

A0A6J1EUM4 uncharacterized protein LOC1114360662.8e-8595.35Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG K YKGF++R RRRT  AETVEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG

A0A6J1FSK6 uncharacterized protein LOC1114480492.1e-8595.93Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        M SRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKE VGLKTYKGFADRGRRR  GAE VEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG

A0A6J1JA70 uncharacterized protein LOC1114831166.2e-8594.77Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRN LSISPDVYP
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG K YKGF+DR RRRT  AETVEPSTKFPWSSMRSG
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSG

SwissProt top hitse value%identityAlignment
A0KF23 50S ribosomal protein L231.9e-0645.76Show/hide
Query:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        I  K    A+K E+K  +  L+  EV+ VRTLNM+GK K+ G  +  + D+KKAYVTL+
Subjt:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

A4ST04 50S ribosomal protein L232.5e-0645.76Show/hide
Query:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        I  K    A+K E+K  +  L+  EV+ VRTLNM+GK K+ G  +  + D+KKAYVTL+
Subjt:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

Q0ABH3 50S ribosomal protein L232.5e-0645.76Show/hide
Query:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTL
        E+  K    A K EI++ +E L+  +V  VRT+ M+GK+K+ G L   +PD+KKAYVTL
Subjt:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTL

Q0I161 50S ribosomal protein L231.4e-0642.47Show/hide
Query:  TNITE----IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSI
        TN TE    I  K    A+K+EI   +E L+  +VD VRT+ ++GK K+RG  +  + D+KKAYVTL+   S+
Subjt:  TNITE----IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSI

Q605B4 50S ribosomal protein L231.1e-0641.67Show/hide
Query:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        +   +  P+ASK++IK  +E ++G +VD VR LN++GK K+ G  +  + D+KKAYV L+
Subjt:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

Arabidopsis top hitse value%identityAlignment
AT4G39880.1 Ribosomal protein L23/L15e family protein1.6e-5365.14Show/hide
Query:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLG RV+HFANLPIKLLMP   TNI E ALKTIPSASKIEIKRVLESLYGF+V+KV TLNM+GKKKKRGGLLIAK DYKKAYVTLR+PLSIS D++P
Subjt:  MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTY-KGFADRGRRR----TDGAETVEPSTKFPWSSMR
        ++ IEED+++  K S S + EE + K HWL  KE   +  Y KG   RG  R    T G      + KFPWS+MR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKTY-KGFADRGRRR----TDGAETVEPSTKFPWSSMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAGACTCGGGAGAAGAGTTATTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCTACCTCCTTCACCAACATCACTGAAATTGCTCTTAAAACCATTCC
ATCTGCTTCCAAAATCGAAATTAAGCGCGTCCTTGAGAGCCTTTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAACATGGAGGGGAAGAAAAAGAAGCGTGGAGGGC
TTTTGATCGCAAAGCCTGATTACAAGAAGGCTTATGTTACTCTCAGGAATCCCTTGTCAATCTCTCCGGACGTGTACCCGATCCGGATTATAGAGGAGGACAAGAGGAAT
ATGAATAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCCAAGAGGCATTGGCTGCATGAGAAGGAGCCTGTGGGACTCAAAACTTACAAGGGTTTTGCTGATAG
AGGCCGCCGACGAACTGACGGTGCTGAAACCGTTGAACCATCGACTAAGTTTCCCTGGAGTAGCATGAGGTCTGGTGCTTTCTCCTTCTCTTGCATTGCTGACCTCATCT
TCACTTGCTCTGAGAACAAAACCTGCATGTCCACTCAGAAATATTATGATTACCACCTGGAACCCTAA
mRNA sequenceShow/hide mRNA sequence
AATTTTCCAATAATTCTCAACCCTTTCTACGTCTGCGATTATGTTTCCCTCTTTCCTTCGACGTTCCCAATAATCCCAGCAGTGCGCGTCGCCGTCCGTTACCAATCCTT
TCACTTTGTTGAAAGTTTGCGGGTACGAATCTCCAATTCACAGAGTGGAGTTGCATTTGTGATTGGGGTTTCAAAGAATCTCTTGACCTGCTGTTCATAGACGCTTTTGA
GTCGGACTTCGGAAGCGAAGAAAGCCAAGAAAATGGGAAGCAGACTCGGGAGAAGAGTTATTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCTACCTCCTTCACC
AACATCACTGAAATTGCTCTTAAAACCATTCCATCTGCTTCCAAAATCGAAATTAAGCGCGTCCTTGAGAGCCTTTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAA
CATGGAGGGGAAGAAAAAGAAGCGTGGAGGGCTTTTGATCGCAAAGCCTGATTACAAGAAGGCTTATGTTACTCTCAGGAATCCCTTGTCAATCTCTCCGGACGTGTACC
CGATCCGGATTATAGAGGAGGACAAGAGGAATATGAATAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCCAAGAGGCATTGGCTGCATGAGAAGGAGCCTGTG
GGACTCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAACTGACGGTGCTGAAACCGTTGAACCATCGACTAAGTTTCCCTGGAGTAGCATGAGGTCTGGTGC
TTTCTCCTTCTCTTGCATTGCTGACCTCATCTTCACTTGCTCTGAGAACAAAACCTGCATGTCCACTCAGAAATATTATGATTACCACCTGGAACCCTAA
Protein sequenceShow/hide protein sequence
MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRN
MNKQSKSSIVEEGEAKRHWLHEKEPVGLKTYKGFADRGRRRTDGAETVEPSTKFPWSSMRSGAFSFSCIADLIFTCSENKTCMSTQKYYDYHLEP