CuGenDBv2

Gene ID	Cla97C10G192550
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	classical arabinogalactan protein 4
Genome location	Cla97Chr10:19960239..19960811
RNA-Seq Expression	Cla97C10G192550
Synteny	Cla97C10G192550
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8649311.1 hypothetical protein Csa_014808 [Cucumis sativus]

2.6e-55

79.55

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +SP SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAI
        PPAVKSPSHAPSPAKTKAPAPAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAI
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAI

KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.0e-51

73.16

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP
        MAS  VL+V+T ALLLISAAA SP+PSPAPSPESP WKWTP+ E PSSPP  EPP          SP  +PPELSPVPSS  P  PP ANPP LSP A P
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP

Query:  PAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTKAPAPAPSKMSP PA+APKSS  P SSPP+PNG MEPP PSVAP APK  N G ANRFAIGGSVA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

XP_008462882.1 PREDICTED: classical arabinogalactan protein 4 [Cucumis melo]

2.0e-60

79.06

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +SP SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTKAPAPAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

XP_011654351.1 classical arabinogalactan protein 4 [Cucumis sativus]

1.0e-59

79.58

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +SP SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAVKSPSHAPSPAKTKAPAPAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAIGGS+A GLMIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]

2.2e-67

86.32

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP
        MASSTVL VLTVALLLISAAA SPVPSPAP PESPAWKWTP+NEPPSSPP AEPP  +SP SPT+SPPATPPE+SP+PSS+AP LPPKANPP LSPTA P
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP

Query:  PAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        P VKSPSHAPSPAKTKAPAPAPSKMSP PAKAPKSS+APASSPPSPNG MEPPAPSVAPA  K+ N G ANRFAIGGSVAVGLMIAALIA
Subjt:  PAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0Q7 Uncharacterized protein

4.9e-60

79.58

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +SP SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAVKSPSHAPSPAKTKAPAPAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAIGGS+A GLMIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

A0A1S3CHW9 classical arabinogalactan protein 4

9.8e-61

79.06

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +SP SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTKAPAPAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

A0A5A7V3Q7 Classical arabinogalactan protein 4

9.8e-61

79.06

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +SP SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTKAPAPAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

A0A6J1E3R0 extensin-like

6.0e-50

71.58

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP
        MAS  VL+V+T ALLLISA+A SP+PSPAPSPESP WKWTP+ + PSSPP  EPP          SP  +PPELSPVPSS  P  PP ANPP LSP A P
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP

Query:  PAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTKAPAPAPSKMS  PA+APKSS AP SSPP+PNG MEPP PSVAP APK  N G ANRFAIGG+VA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

A0A6J1JCM0 extensin-like

1.2e-47

71.05

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Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP
        MAS  VL+V+T ALLLISA+A SP+PS APSPES  WKWTP+ E PSSPP  EPP          SP  +PPELSPVPSS  P  P  ANPP LSP A P
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP

Query:  PAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTKAPAPAPSKMSP PA+APKSS APASSPP+PNG MEPP PSVAP APK  N G ANRFAI  SVA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

SwissProt top hits

e value

%identity

Alignment

Q9FPQ6 Vegetative cell wall protein gp1

8.1e-04

40.38

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Query:  SAAATSPVPSPAPSPESPAWKWTPNNEPPS-SPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTK
        S A  SP P P+P+P SPA    P+  PPS SPP    P+  SP+ P    PA P    PVP S +P +PP   PP+ +P +P P V      PSPA   
Subjt:  SAAATSPVPSPAPSPESPAWKWTPNNEPPS-SPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTK

Query:  APAPAPSKMSP----------PPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAP
         P+PAP   +P          PP+ AP S  +PA   PSP     P  PS AP +P
Subjt:  APAPAPSKMSP----------PPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAP

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCTTCCTCCACCGTTCTGCATGTTCTCACGGTGGCGCTCTTGCTGATCTCCGCCGCTGCAACATCCCCAGTACCATCTCCAGCGCCGAGCCCCGAATCACCGGCGTG
GAAATGGACTCCCAATAACGAGCCACCATCCTCTCCACCGACGGCGGAACCGCCTACGGCGTCGTCCCCATCTTCCCCAACAATGTCTCCGCCGGCCACCCCACCGGAGC
TCAGCCCCGTTCCATCATCCCATGCACCGATTTTACCACCCAAGGCTAACCCACCCGCATTGTCGCCGACCGCTCCACCGCCGGCGGTGAAGAGCCCCAGTCATGCGCCA
TCCCCGGCAAAAACGAAAGCACCGGCTCCGGCTCCGTCGAAAATGAGCCCACCACCGGCCAAGGCACCGAAATCTTCTCAAGCTCCGGCGAGTAGTCCCCCATCACCAAA
TGGAAGTATGGAGCCACCAGCGCCATCCGTAGCTCCGGCAGCGCCGAAGCAGAGTAACAGCGGCGGTGCAAACAGATTCGCCATTGGTGGGTCTGTTGCAGTTGGATTAA
TGATTGCGGCTTTAATCGCTTAA

mRNA sequence

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Protein sequence

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MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAP
SPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

Cla97C10G192550 (gene) of Watermelon (97103) v2.5 genome