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Cla97C10G192640 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G192640
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionDNA replication complex GINS protein PSF2
Genome locationCla97Chr10:20460168..20471889
RNA-Seq ExpressionCla97C10G192640
SyntenyCla97C10G192640
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0031981 - nuclear lumen (cellular component)
InterPro domainsIPR007257 - DNA replication complex GINS protein Psf2
IPR021151 - GINS subunit, domain A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595523.1 DNA replication complex GINS protein PSF2, partial [Cucurbita argyrosperma subsp. sororia]5.5e-3783.87Show/hide
Query:  LSGRIKSVLARFKMAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        +SG    +    +MAGQSDPHL LFSAEE+EFVAEDEMVEIVPNMRMDSL+LICGDYGPFYPQIATEVPLWLAIALKKRGKCAIR PEWMSVE
Subjt:  LSGRIKSVLARFKMAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

TYK07564.1 DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo var. makuwa]4.2e-3797.5Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        MAGQSDP LNLFSAEEVEFVAEDEM+EIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

XP_004137154.1 DNA replication complex GINS protein PSF2 [Cucumis sativus]2.9e-3898.75Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        MAGQSDPHLNLFSAEEVEFVAEDEMVEI+PNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

XP_008462891.1 PREDICTED: DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo]4.2e-3797.5Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        MAGQSDP LNLFSAEEVEFVAEDEM+EIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

XP_038905117.1 DNA replication complex GINS protein PSF2 isoform X1 [Benincasa hispida]1.1e-3798.75Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIR PEWMSVE
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

TrEMBL top hitse value%identityAlignment
A0A0A0KVY8 Sld5 domain-containing protein1.1e-3894.19Show/hide
Query:  SVLARFKMAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV
        SV A  +MAGQSDPHLNLFSAEEVEFVAEDEMVEI+PNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV
Subjt:  SVLARFKMAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV

A0A1S4E3Y0 DNA replication complex GINS protein PSF22.0e-3797.5Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        MAGQSDP LNLFSAEEVEFVAEDEM+EIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

A0A5D3C8I7 DNA replication complex GINS protein PSF2 isoform X12.0e-3797.5Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        MAGQSDP LNLFSAEEVEFVAEDEM+EIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

A0A6J1HN13 DNA replication complex GINS protein PSF22.2e-3695Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        MAGQSDPHL LFSAEE+EFVAEDEMVEIVPNMRMDSL+LICGDYGPFYPQIATEVPLWLAIALKKRGKCAIR PEWMSVE
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

A0A6J1HPD8 DNA replication complex GINS protein PSF22.2e-3695Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        MAGQSDPHL LFSAEE+EFVAEDEMVEIVPNMRMDSL+LICGDYGPFYPQIATEVPLWLAIALKKRGKCAIR PEWMSVE
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

SwissProt top hitse value%identityAlignment
Q54BL9 Probable DNA replication complex GINS protein PSF22.7e-1552.38Show/hide
Query:  EVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMS
        ++EF+AED  + +VPN +M+SL  + G+YGPF P    E+PLWLAI+LKK+ KC I  P+WM+
Subjt:  EVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMS

Q7ZT46 DNA replication complex GINS protein PSF21.5e-1659.7Show/hide
Query:  AEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        A EVEF+AE E V ++PN  +D ++LI GD GPF P +  EVPLWLAI LK+R KC I  PEWM VE
Subjt:  AEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

Q9C7A8 DNA replication complex GINS protein PSF21.7e-2869.14Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEN
        MAGQ+DPH++LFS +EVEF+AEDE+VEIVPNM M+ L+ I GD+G F PQI T+VPLWLA+ALK+RGKC  R P WMSV+N
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEN

Q9D600 DNA replication complex GINS protein PSF23.2e-1658.21Show/hide
Query:  AEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        A EVEF+AE E+V I+PN  +D ++LI GD GPF P +  +VPLWLAI LK+R KC +  PEWM VE
Subjt:  AEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

Q9Y248 DNA replication complex GINS protein PSF21.5e-1659.7Show/hide
Query:  AEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE
        A EVEF+AE E+V I+PN  +D ++LI GD GPF P +  EVPLWLAI LK+R KC +  PEWM VE
Subjt:  AEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVE

Arabidopsis top hitse value%identityAlignment
AT3G12530.1 PSF21.2e-2969.14Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEN
        MAGQ+DPH++LFS +EVEF+AEDE+VEIVPNM M+ L+ I GD+G F PQI T+VPLWLA+ALK+RGKC  R P WMSV+N
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEN

AT3G12530.2 PSF22.2e-2067.74Show/hide
Query:  VAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEN
        +AEDE+VEIVPNM M+ L+ I GD+G F PQI T+VPLWLA+ALK+RGKC  R P WMSV+N
Subjt:  VAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCAACAGACAAGGTCACAAAGTATGTAGGAGCTATCGTCGTTGTCGAAGGTTGGGGTGGTGGCGCAGTTGACGTCGGTGGAGAAGAAGGTGGAATTGGTGGTGC
AATTGAAGCTAGAATTGAAGGCTTGTCTTCTGTCGCGAAACCTAAACAAGGCGAAGCAAATTTGGATTATCGGACGAACGAAGAAAAGTTATGCCCTGAAATTTTGAAGA
CTCGGAGAAGGCATGTGGATAACTTGAGTATAGAGATAGCCCCCAATACTGAAGGACTTGGAGAAGGCATGTGGCTAAGGATATTTGACGTTGAGTGTGTCGAGATTACT
CCGCCTCAACTAAGAATGTTTTCGACGTTGAGTAGCGTTGAGCTCCGTTCCACCTCAACTAAGGAAATGTTGACAGTAGATGCCGTAAGAGGGGTGATGTCTGCTATCCT
CACACTTTCTCCTAGGTTAAGGAGGTCTTCAATAGCCGCACGCACAGCCCAACGTCGCACCGCCGTTTGCCAGCCGCCGCGCCGCCGTCCGCCGGTCACCCACGCAAGGT
TCTCTCTCCCTCGATTTCTCTCTCTATCTCTGTCTCTATATCACCAATCTACAGCAGCTGCTCTTCCTCTGTCCGCCGCACCTCCGACTAGACGCCAGCACACGCCCAAC
CATCGTGGACCGTCGCCGCTCACCGGAATCTTGCTGTGGATTGGAGTTTTGGAAGGTTTTAGGCTGCTGTCTGGCAGGATCAAAAGCGTTTTGGCACGTTTTAAAATGGC
TGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTTGAGTTTGTAGCTGAAGATGAAATGGTGGAGATCGTTCCTAATATGAGAATGGACTCTCTGCATT
TGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCGACCGAAGTTCCATTGTGGCTTGCGATTGCTCTAAAAAAAAGAGGGAAATGTGCAATTAGGACTCCAGAG
TGGATGTCAGTGGAAAATGACATGGCATCGTGTTGGTATCGTGTCATATCCCACCATAGCCATAGGTCTTCTCTTCAATTAGTTTGGTTGGCTTTTCCTCTGCATTTTTC
TCTTGGTGACTCCTCGTTGATGGTTGCTTTTAGCCTTGTTTGCTTCTTCGTTGCCGGCCTCCATGCAACACTACCCATCGTTCTATCAACTAGTCGTTTCACTCTGCCAC
TCAACATTTCTATTGCCACTCTCATAGCTCGTCAGGGATCGAACACCAAAATAAAACGAGCAATAGGAAACCCGTCTAGAGAGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCAACAGACAAGGTCACAAAGTATGTAGGAGCTATCGTCGTTGTCGAAGGTTGGGGTGGTGGCGCAGTTGACGTCGGTGGAGAAGAAGGTGGAATTGGTGGTGC
AATTGAAGCTAGAATTGAAGGCTTGTCTTCTGTCGCGAAACCTAAACAAGGCGAAGCAAATTTGGATTATCGGACGAACGAAGAAAAGTTATGCCCTGAAATTTTGAAGA
CTCGGAGAAGGCATGTGGATAACTTGAGTATAGAGATAGCCCCCAATACTGAAGGACTTGGAGAAGGCATGTGGCTAAGGATATTTGACGTTGAGTGTGTCGAGATTACT
CCGCCTCAACTAAGAATGTTTTCGACGTTGAGTAGCGTTGAGCTCCGTTCCACCTCAACTAAGGAAATGTTGACAGTAGATGCCGTAAGAGGGGTGATGTCTGCTATCCT
CACACTTTCTCCTAGGTTAAGGAGGTCTTCAATAGCCGCACGCACAGCCCAACGTCGCACCGCCGTTTGCCAGCCGCCGCGCCGCCGTCCGCCGGTCACCCACGCAAGGT
TCTCTCTCCCTCGATTTCTCTCTCTATCTCTGTCTCTATATCACCAATCTACAGCAGCTGCTCTTCCTCTGTCCGCCGCACCTCCGACTAGACGCCAGCACACGCCCAAC
CATCGTGGACCGTCGCCGCTCACCGGAATCTTGCTGTGGATTGGAGTTTTGGAAGGTTTTAGGCTGCTGTCTGGCAGGATCAAAAGCGTTTTGGCACGTTTTAAAATGGC
TGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTTGAGTTTGTAGCTGAAGATGAAATGGTGGAGATCGTTCCTAATATGAGAATGGACTCTCTGCATT
TGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCGACCGAAGTTCCATTGTGGCTTGCGATTGCTCTAAAAAAAAGAGGGAAATGTGCAATTAGGACTCCAGAG
TGGATGTCAGTGGAAAATGACATGGCATCGTGTTGGTATCGTGTCATATCCCACCATAGCCATAGGTCTTCTCTTCAATTAGTTTGGTTGGCTTTTCCTCTGCATTTTTC
TCTTGGTGACTCCTCGTTGATGGTTGCTTTTAGCCTTGTTTGCTTCTTCGTTGCCGGCCTCCATGCAACACTACCCATCGTTCTATCAACTAGTCGTTTCACTCTGCCAC
TCAACATTTCTATTGCCACTCTCATAGCTCGTCAGGGATCGAACACCAAAATAAAACGAGCAATAGGAAACCCGTCTAGAGAGTACTGA
Protein sequenceShow/hide protein sequence
MPPTDKVTKYVGAIVVVEGWGGGAVDVGGEEGGIGGAIEARIEGLSSVAKPKQGEANLDYRTNEEKLCPEILKTRRRHVDNLSIEIAPNTEGLGEGMWLRIFDVECVEIT
PPQLRMFSTLSSVELRSTSTKEMLTVDAVRGVMSAILTLSPRLRRSSIAARTAQRRTAVCQPPRRRPPVTHARFSLPRFLSLSLSLYHQSTAAALPLSAAPPTRRQHTPN
HRGPSPLTGILLWIGVLEGFRLLSGRIKSVLARFKMAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPE
WMSVENDMASCWYRVISHHSHRSSLQLVWLAFPLHFSLGDSSLMVAFSLVCFFVAGLHATLPIVLSTSRFTLPLNISIATLIARQGSNTKIKRAIGNPSREY