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Cla97C10G193260 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G193260
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
Genome locationCla97Chr10:21562494..21566044
RNA-Seq ExpressionCla97C10G193260
SyntenyCla97C10G193260
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0015995 - chlorophyll biosynthetic process (biological process)
GO:1901401 - regulation of tetrapyrrole metabolic process (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0048529 - magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity (molecular function)
InterPro domainsIPR008434 - Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144646.1 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Cucumis sativus]3.3e-1493.62Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        NDLPLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
XP_008465236.1 PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Cucumis melo]3.3e-1493.62Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        NDLPLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
XP_022950251.1 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Cucurbita moschata]1.7e-1389.36Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        N++PLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
XP_023543462.1 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Cucurbita pepo subsp. pepo]1.7e-1389.36Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        N++PLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
XP_038882780.1 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Benincasa hispida]7.4e-1493.62Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        N+LPLVKNLKRIPLAAALVSEVLA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
TrEMBL top hitse value%identityAlignment
A0A0A0L1I7 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase1.6e-1493.62Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        NDLPLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
A0A1S3CNU0 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase1.6e-1493.62Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        NDLPLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
A0A5D3E064 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase1.6e-1493.62Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        NDLPLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
A0A6J1GEB5 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase8.0e-1489.36Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        N++PLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
A0A6J1INY1 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase8.0e-1489.36Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        N++PLVKNLKRIPLAAALVSE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
SwissProt top hitse value%identityAlignment
Q5EFU4 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic4.1e-1582.98Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        NDLPLVKNLKR+PL A LVSE++A YLMPPI+SGSVDFAEFEP+LVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
Q6SJV8 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic5.3e-1585.11Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        +D+PLVKNLKRIPL AAL SE+LA YLMPPI+SGSVDFAEFEPQLVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
Q945B7 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic3.8e-1380.43Show/hide
Query:  DLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        D  +VKNLKR+PL AALVSE+LA YLMPPI+SGSVDFAEFEP+LVY
Subjt:  DLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
Q9M591 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic2.7e-1168.09Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        +D   +K LKRIPL  +L SE+LA YLMPP++SGSVDFAEFEP LVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
Arabidopsis top hitse value%identityAlignment
AT3G56940.1 dicarboxylate diiron protein, putative (Crd1)1.9e-1268.09Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        +D   +K LKRIPL  +L SE+LA YLMPP++SGSVDFAEFEP LVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
AT3G56940.2 dicarboxylate diiron protein, putative (Crd1)1.9e-1268.09Show/hide
Query:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY
        +D   +K LKRIPL  +L SE+LA YLMPP++SGSVDFAEFEP LVY
Subjt:  NDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACAGGCACCGCCATTTCTTCTCTGCATTGCTCAAGGCACAGCCTCAGTTCCTCAACGACTGGAAGGCTAAGTTGTGGTCTCCATTCTTCTGCTTATCGCAATGA
TCTTCCTTTGGTGAAGAACTTGAAGAGGATCCCACTTGCTGCAGCATTGGTATCTGAGGTTTTGGCTGAATATTTGATGCCTCCAATTGACTCTGGATCTGTTGATTTTG
CTGAATTTGAACCTCAACTTGTGTACTACAGTTTTATTCTTAGCTCATTTCCCACTCATCTTTTTAGTATGTTCAGTTTGAATGAGTGTAATCTGTTATGTAATCGGTTG
TGGAGGATCGTTCTCGGCAGGCCTCCAACCTGCTGGGATGGTCGCAAGGTGTTGTGTGAAGAGATTAGAAAGATGGGGGAGTTTTACTTAGATGGTGGGTATTTGGTTTA
TGCTTGTAAGGTTTTGGATAAGGCTCTGTCTGATTTTCAATTGGCACTGGACTTCGACTTTCTGGCAAAGATCAGTCTTGCTATCGTTCGCGTCCATTGTCCTCAATCAC
CAGCCATTCACCGTGCGTCGTCAGACGCCATTCGTCAAGGTCGTCTAGCCGGCTATGCGGTAGAACTCGTCCCAATCCCATTTTTGCACTCTCCCTCTGTCGACTCTCTC
TCTCTCTCTCTTGCTCAGGCCACATCGGCAACCAACTACCGTCTACCACGTTGTAGTATCACCCATCGCCGTCCACCTCGCCAGCCACCACGGCTTCCACCATTGGTAAG
GGTCATCAATTTCCTTCTCTCTATTTTTCTTCCCTTTTCCCTCTCTCTCTCACAACGTGTCTGTTCTGCCTCGGTGTCCGTCTGTTGTGCAACGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAACAGGCACCGCCATTTCTTCTCTGCATTGCTCAAGGCACAGCCTCAGTTCCTCAACGACTGGAAGGCTAAGTTGTGGTCTCCATTCTTCTGCTTATCGCAATGA
TCTTCCTTTGGTGAAGAACTTGAAGAGGATCCCACTTGCTGCAGCATTGGTATCTGAGGTTTTGGCTGAATATTTGATGCCTCCAATTGACTCTGGATCTGTTGATTTTG
CTGAATTTGAACCTCAACTTGTGTACTACAGTTTTATTCTTAGCTCATTTCCCACTCATCTTTTTAGTATGTTCAGTTTGAATGAGTGTAATCTGTTATGTAATCGGTTG
TGGAGGATCGTTCTCGGCAGGCCTCCAACCTGCTGGGATGGTCGCAAGGTGTTGTGTGAAGAGATTAGAAAGATGGGGGAGTTTTACTTAGATGGTGGGTATTTGGTTTA
TGCTTGTAAGGTTTTGGATAAGGCTCTGTCTGATTTTCAATTGGCACTGGACTTCGACTTTCTGGCAAAGATCAGTCTTGCTATCGTTCGCGTCCATTGTCCTCAATCAC
CAGCCATTCACCGTGCGTCGTCAGACGCCATTCGTCAAGGTCGTCTAGCCGGCTATGCGGTAGAACTCGTCCCAATCCCATTTTTGCACTCTCCCTCTGTCGACTCTCTC
TCTCTCTCTCTTGCTCAGGCCACATCGGCAACCAACTACCGTCTACCACGTTGTAGTATCACCCATCGCCGTCCACCTCGCCAGCCACCACGGCTTCCACCATTGGTAAG
GGTCATCAATTTCCTTCTCTCTATTTTTCTTCCCTTTTCCCTCTCTCTCTCACAACGTGTCTGTTCTGCCTCGGTGTCCGTCTGTTGTGCAACGCCCTAG
Protein sequenceShow/hide protein sequence
MRTGTAISSLHCSRHSLSSSTTGRLSCGLHSSAYRNDLPLVKNLKRIPLAAALVSEVLAEYLMPPIDSGSVDFAEFEPQLVYYSFILSSFPTHLFSMFSLNECNLLCNRL
WRIVLGRPPTCWDGRKVLCEEIRKMGEFYLDGGYLVYACKVLDKALSDFQLALDFDFLAKISLAIVRVHCPQSPAIHRASSDAIRQGRLAGYAVELVPIPFLHSPSVDSL
SLSLAQATSATNYRLPRCSITHRRPPRQPPRLPPLVRVINFLLSIFLPFSLSLSQRVCSASVSVCCATP