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Cla97C10G193830 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G193830
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCla97Chr10:22687262..22691051
RNA-Seq ExpressionCla97C10G193830
SyntenyCla97C10G193830
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042454.1 hypothetical protein E6C27_scaffold45606G00020 [Cucumis melo var. makuwa]4.8e-0577.14Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKWGH SP SALP+ IDII STEIDF +NQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
KAG4906008.1 hypothetical protein JHK86_057255 [Glycine max]4.8e-0577.14Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKWGH SP SALP+ IDII STEIDF +NQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
KAG4930963.1 hypothetical protein JHK86_047924 [Glycine max]1.1e-0474.29Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKWGH SP SALP+ IDI+ STEIDF +NQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
KHN28130.1 Putative mitochondrial protein [Glycine soja]1.1e-0474.29Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKWGH SP SALP+ IDI+ STEIDF +NQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
YP_009526585.1 hypothetical protein [Ammopiptanthus mongolicus]4.8e-0577.14Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKWGH SP SALP+ IDII STEIDF +NQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
TrEMBL top hitse value%identityAlignment
A0A0B2R388 Putative mitochondrial protein5.1e-0574.29Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKWGH SP SALP+ IDI+ STEIDF +NQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
A0A385G2C2 Uncharacterized protein2.3e-0577.14Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKWGH SP SALP+ IDII STEIDF +NQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
A0A5A7TGB6 Uncharacterized protein2.3e-0577.14Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKWGH SP SALP+ IDII STEIDF +NQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
A0A5A7VFJ7 Uncharacterized protein8.8e-0577.14Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKW H  P SALPQ IDII STEIDF KNQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
A0A5D3DWH1 Uncharacterized protein8.8e-0577.14Show/hide
Query:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
        AKW H  P SALPQ IDII STEIDF KNQLY IL
Subjt:  AKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATGGGGCCATTCTAGTCCGTTCAGTGCTCTTCCACAGACTATTGACATAATTTGCTCAACTGAGATAGATTTCAAGAAAAACCAGCTATATTTGATCTTGGC
TGCTGACATTTCGTTTGTTTTGAAAAATTTTTATTCTAGTTCTTTTCCCCCTTCTAAGGTCAGTAGCATTCTTACATTTAAGTTTGACATGAAATGTGGGGCTGTGTCCG
GTAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAATGGGGCCATTCTAGTCCGTTCAGTGCTCTTCCACAGACTATTGACATAATTTGCTCAACTGAGATAGATTTCAAGAAAAACCAGCTATATTTGATCTTGGC
TGCTGACATTTCGTTTGTTTTGAAAAATTTTTATTCTAGTTCTTTTCCCCCTTCTAAGGTCAGTAGCATTCTTACATTTAAGTTTGACATGAAATGTGGGGCTGTGTCCG
GTAGGTAG
Protein sequenceShow/hide protein sequence
MAKWGHSSPFSALPQTIDIICSTEIDFKKNQLYLILAADISFVLKNFYSSSFPPSKVSSILTFKFDMKCGAVSGR