; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C10G195400 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C10G195400
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description60S ribosomal protein L6
Genome locationCla97Chr10:24940965..24943995
RNA-Seq ExpressionCla97C10G195400
SyntenyCla97C10G195400
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000915 - 60S ribosomal protein L6E
IPR005568 - Ribosomal protein L6, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041997 - Ribosomal Protein L6, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149609.1 60S ribosomal protein L6-2 [Cucumis sativus]6.4e-11384.59Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+ PAEKPPKFYPADDVKKP+VNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           SSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_008461779.1 PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo]2.4e-11284.21Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK + PAEKPPKFYPADDVKKPLVNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           +SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_022935449.1 60S ribosomal protein L6-1-like [Cucurbita moschata]3.8e-11384.59Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D PAEKPPKFYPADDVKKPLVNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           SSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_023528566.1 60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]4.2e-11283.83Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D PAEKPPKFYPADDVKKPLVNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           SSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_038880885.1 60S ribosomal protein L6-1-like [Benincasa hispida]8.4e-11384.96Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD PAEKPPKFYPADDVKKPLVNKRK KPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           SSITPGTVLIILTGRFKGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAV+DLKTYLAARFSLKAGMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

TrEMBL top hitse value%identityAlignment
A0A0A0L9J7 60S ribosomal protein L63.1e-11384.59Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+ PAEKPPKFYPADDVKKP+VNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           SSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A1S3CFY6 60S ribosomal protein L61.2e-11284.21Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK + PAEKPPKFYPADDVKKPLVNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           +SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A5D3CKB9 60S ribosomal protein L61.2e-11284.21Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK + PAEKPPKFYPADDVKKPLVNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           +SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A6J1F5G0 60S ribosomal protein L61.8e-11384.59Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D PAEKPPKFYPADDVKKPLVNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           SSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A6J1J7G9 60S ribosomal protein L62.0e-11284.21Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D PAEKPPKFYPADDVKKPLVNKRKAKPTKL                 
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL

Query:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK
                           SSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQK
Subjt:  GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQK

Query:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVS LKTYLAARFSLK+GMKPHELVF
Subjt:  KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

SwissProt top hitse value%identityAlignment
P34091 60S ribosomal protein L61.1e-9471.81Show/hide
Query:  VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGV
        VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADDVKKPL+NKRK KPTKL                        
Subjt:  VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGV

Query:  NCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEG
                    +SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQ+YVIATSTKVDI+GVNVEKFDDKYF K+ +KK KKGEG
Subjt:  NCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEG

Query:  EFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        EFFEAEK+E + LPQ+KKDDQKAVD ALLK+IE V +LK YL ARFSLKAGMKPHELVF
Subjt:  EFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

P47911 60S ribosomal protein L62.5e-4343.21Show/hide
Query:  PKTAR--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD--------------------TPAEKPPKFYPADDVKKPLVNKRKAKP
        PK A+   SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +                        K P++YP +DV + L++  K KP
Subjt:  PKTAR--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD--------------------TPAEKPPKFYPADDVKKPLVNKRKAKP

Query:  TKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
            V                               R  SSITPGTVLIILTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVD
Subjt:  TKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD

Query:  IAGVNVEK-FDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        I+ V + K   D YF K+  +K +  EGE F+ EK EK  + + +K DQKAVD  +L  I+AV  L+ YL ++FSL  GM PH+LVF
Subjt:  IAGVNVEK-FDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Q9C9C5 60S ribosomal protein L6-31.1e-9671.48Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNR
        +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D P EKPPKFYPA+DVKKPL N+R AKPTKL                    
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNR

Query:  GIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKK
                        +SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKK
Subjt:  GIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKK

Query:  KGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        K EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  KGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Q9C9C6 60S ribosomal protein L6-26.7e-9771.48Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNR
        +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D P EKPPKFYPA+DVKKPL N+R AKP KL                    
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNR

Query:  GIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKK
                        +SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKK
Subjt:  GIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKK

Query:  KGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        K EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  KGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Q9FZ76 60S ribosomal protein L6-13.9e-9770.57Show/hide
Query:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLG
        A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D P EKP KFYPA+DVKKPLVN+RK KPTKL                  
Subjt:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLG

Query:  NRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKK
                          +SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KK
Subjt:  NRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKK

Query:  KKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKK EGEFFEAEKEEK  +PQ+KK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Subjt:  KKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Arabidopsis top hitse value%identityAlignment
AT1G18540.1 Ribosomal protein L6 family protein2.8e-9870.57Show/hide
Query:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLG
        A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D P EKP KFYPA+DVKKPLVN+RK KPTKL                  
Subjt:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLG

Query:  NRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKK
                          +SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KK
Subjt:  NRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKK

Query:  KKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KKK EGEFFEAEKEEK  +PQ+KK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Subjt:  KKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

AT1G74050.1 Ribosomal protein L6 family protein8.1e-9871.48Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNR
        +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D P EKPPKFYPA+DVKKPL N+R AKPTKL                    
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNR

Query:  GIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKK
                        +SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKK
Subjt:  GIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKK

Query:  KGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        K EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  KGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

AT1G74060.1 Ribosomal protein L6 family protein4.8e-9871.48Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNR
        +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D P EKPPKFYPA+DVKKPL N+R AKP KL                    
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNR

Query:  GIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKK
                        +SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKK
Subjt:  GIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKK

Query:  KGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        K EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  KGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCATAAGCGAGGTCTCTGGGCAATCAAGGC
AAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCGACACTCCAGCGGAGAAGCCGCCGAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTCA
ACAAGCGCAAGGCTAAGCCCACCAAACTTAGTGTCTTGGAACTTATAATGTTTGCTGTTCTTTCAACTTTGGTATGGTTGGGAAACCGAGGCATTGGAGTAAATTGTAGA
ATGGACAATGTAAAACCTCGATATGGGTCTAGCATTACTCCTGGAACTGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCC
ATCTGGCTTGCTTTTAGTGACTGGTCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATATGTGATAGCGACCTCCACCAAGGTGGACATTGCTGGAG
TGAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTCCAAAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTT
CCACAGGACAAAAAAGATGATCAGAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCCCTAAAGGC
AGGCATGAAACCACACGAACTTGTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
AAGCCTAGAAGTGTTTCGGCAAGCAGGGGAGAGGAGACGACGCTGCCAAATTCTCAGAAATTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCA
TTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCATAAGCGAGGTCTCTGGGCAATCAAGGCAAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAG
GCCGACACTCCAGCGGAGAAGCCGCCGAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGTGTCTTGGAACT
TATAATGTTTGCTGTTCTTTCAACTTTGGTATGGTTGGGAAACCGAGGCATTGGAGTAAATTGTAGAATGGACAATGTAAAACCTCGATATGGGTCTAGCATTACTCCTG
GAACTGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGCTTGCTTTTAGTGACTGGTCCATTCAAGGTCAATGGT
GTTCCTTTGAGGCGTGTGAATCAGTCATATGTGATAGCGACCTCCACCAAGGTGGACATTGCTGGAGTGAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGT
CCAAAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAGGACAAAAAAGATGATCAGAAGGCCGTGGACTCAGCTC
TGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCCCTAAAGGCAGGCATGAAACCACACGAACTTGTTTTCTAGATATTTATCTCT
TTGGTGCTGATACTTTCCTTGTGGAATTTGATCCCTACAATCTTCTTGTTCATGTTTTGTTATGGGGATTCTAGATTTGAAATTATGCTTCGCAATAAATTTTGCAGTGA
ACTTTTATTCATCAAATTTTGCGTTATGTAGCTTCCTTTGACCACTGATGGTGATAAGATTTGTACTTTTTCTTCAATTGTATCATTGTCTTCTAGCTGAAGAAACACTT
GAGAGAATCATTTGAAAAGAAGCCATGGTGCATAGCCATATATGGTTAGTCTTCAACGAGTTACTATTAGGCCTATGGATGCTCGAGTCTCAAATATTTGTG
Protein sequenceShow/hide protein sequence
MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCR
MDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSAL
PQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF