| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7028125.1 Small RNA-binding protein 11, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma] | 5.4e-60 | 89.55 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
M AIRKAMA+SS+R VL SLF PPSRL+SFRGIASKLFVGGLSFYT+DKGL+EAFSQYGQVVEAKVV DRVSDKSKGFGFVTFAS+DEAHTALTEMNGK
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFVDYAKPT+NFRGGIPIARGPPEEKT+E
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| XP_022933740.1 small RNA-binding protein 11, chloroplastic-like [Cucurbita moschata] | 2.2e-61 | 91.79 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
M AIRKAMA+SS+R VL SLF PPSRL+SFRGIASKLFVGGLSFYT+DKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGK
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFVDYAKPT+NFRGGIPIARGPPEEKT+E
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| XP_023005174.1 small RNA-binding protein 11, chloroplastic-like [Cucurbita maxima] | 5.2e-63 | 94.03 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
M AIRKAMAISSNR VLPS+FTPPSRL+SFRGIASKLFVGGLSFYT+DKGLSEAFSQYGQVVEAKVV DRVSDKSKGFGFVTFASEDEAHTALTEMNGK
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKT+E
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| XP_023538908.1 small RNA-binding protein 11, chloroplastic-like [Cucurbita pepo subsp. pepo] | 9.9e-62 | 92.54 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
M AIRKAMAISS+R VL SLF PPSRL+SFRGIASKLFVGGLSFYT+DKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGK
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFVDYAKPT+NFRGGIPIARGPPEEKT+E
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| XP_038903502.1 small RNA-binding protein 11, chloroplastic [Benincasa hispida] | 5.2e-63 | 95.52 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
MEAIRKAMAISSNR VLPSLFT PSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVV DRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFVDYAKPTS FR GIPIARGPPEEKT+E
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LE31 RRM domain-containing protein | 2.5e-58 | 86.57 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
MEAIRKAMAI+SNR VLPSLF PPSRLVS+RGIA+KLFVGGLS+YTTDKGLSEAFSQYGQV+EA VV DRVSDKSKGFGFVTFAS DEAHTAL+EMNGKP
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFV+YAKPT++ RG IPIARGPPEEKT++
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| A0A1S3B7I3 glycine-rich RNA-binding protein 4, mitochondrial isoform X1 | 1.4e-58 | 87.31 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
MEAIRKA+AISSNR VLPSLF PPSRLVSFRGIA+KLFVGGLS+YTTDKGLSEAFSQYGQV+EA VV DRVSDKSKGFGFVTFAS DEAHTAL+EMNGKP
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFV+YAKPT++ RG IPIARGPPEEKT++
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| A0A5A7TKK4 Glycine-rich RNA-binding protein 4 | 1.4e-58 | 87.31 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
MEAIRKA+AISSNR VLPSLF PPSRLVSFRGIA+KLFVGGLS+YTTDKGLSEAFSQYGQV+EA VV DRVSDKSKGFGFVTFAS DEAHTAL+EMNGKP
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFV+YAKPT++ RG IPIARGPPEEKT++
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| A0A6J1F5P0 small RNA-binding protein 11, chloroplastic-like | 1.1e-61 | 91.79 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
M AIRKAMA+SS+R VL SLF PPSRL+SFRGIASKLFVGGLSFYT+DKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGK
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFVDYAKPT+NFRGGIPIARGPPEEKT+E
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| A0A6J1KYF3 small RNA-binding protein 11, chloroplastic-like | 2.5e-63 | 94.03 | Show/hide |
Query: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
M AIRKAMAISSNR VLPS+FTPPSRL+SFRGIASKLFVGGLSFYT+DKGLSEAFSQYGQVVEAKVV DRVSDKSKGFGFVTFASEDEAHTALTEMNGK
Subjt: MEAIRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKP
Query: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKT+E
Subjt: LNGRVIFVDYAKPTSNFRGGIPIARGPPEEKTEE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P60826 Cold-inducible RNA-binding protein | 7.0e-18 | 50 | Show/hide |
Query: KLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSN-----FRGGIPIARG
KLFVGGLSF T ++ L + FS+YGQ+ E VV DR + +S+GFGFVTF + D+A A+ MNGK ++GR I VD A +S+ +RGG RG
Subjt: KLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSN-----FRGGIPIARG
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| Q14011 Cold-inducible RNA-binding protein | 7.0e-18 | 50 | Show/hide |
Query: KLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSN-----FRGGIPIARG
KLFVGGLSF T ++ L + FS+YGQ+ E VV DR + +S+GFGFVTF + D+A A+ MNGK ++GR I VD A +S+ +RGG RG
Subjt: KLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSN-----FRGGIPIARG
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| Q28IQ9 Cold-inducible RNA-binding protein | 3.7e-19 | 52.08 | Show/hide |
Query: KLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSN-----FRGGIPIARG
KLFVGGL+F TT++ L + FS+YGQV E VV DR S +S+GFGFVTF + ++A A+ MNGK ++GR I VD A +SN +RGG RG
Subjt: KLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSN-----FRGGIPIARG
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| Q9FFZ6 Small RNA-binding protein 11, chloroplastic | 1.2e-33 | 71.29 | Show/hide |
Query: RGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSNF--RGGIPIARGPP
RG+ASKLF+GGLSF TT++GLSEAFS+ GQVVEA++V DRVSD+SKGFGFVTFAS DEA AL E NG+ LNGR IFVDYAK + GG PIARGPP
Subjt: RGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSNF--RGGIPIARGPP
Query: E
+
Subjt: E
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| Q9LIS2 Glycine-rich RNA-binding protein 4, mitochondrial | 2.0e-20 | 46.72 | Show/hide |
Query: IRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNG
+R+ ++ SSN V S L S R ++SKLFVGGLS+ T D L +AF+ +G+V EA V+ DR + +S+GFGFV+F+ ED A+ A+ EM+GK LNG
Subjt: IRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNG
Query: RVIFVDYA-----KPTSNFRGG
R I V+ A P S+F GG
Subjt: RVIFVDYA-----KPTSNFRGG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G23830.1 glycine-rich RNA-binding protein 4 | 1.4e-21 | 46.72 | Show/hide |
Query: IRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNG
+R+ ++ SSN V S L S R ++SKLFVGGLS+ T D L +AF+ +G+V EA V+ DR + +S+GFGFV+F+ ED A+ A+ EM+GK LNG
Subjt: IRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNG
Query: RVIFVDYA-----KPTSNFRGG
R I V+ A P S+F GG
Subjt: RVIFVDYA-----KPTSNFRGG
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| AT3G23830.2 glycine-rich RNA-binding protein 4 | 1.4e-21 | 46.72 | Show/hide |
Query: IRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNG
+R+ ++ SSN V S L S R ++SKLFVGGLS+ T D L +AF+ +G+V EA V+ DR + +S+GFGFV+F+ ED A+ A+ EM+GK LNG
Subjt: IRKAMAISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNG
Query: RVIFVDYA-----KPTSNFRGG
R I V+ A P S+F GG
Subjt: RVIFVDYA-----KPTSNFRGG
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| AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.7e-19 | 48.31 | Show/hide |
Query: IASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSNFRGGI
I+++LFV LS YTTD+ L + FS +GQ+ EA+++ D + + KGFGF+TF SED+A AL ++GK ++GR+IFV+ AK R GI
Subjt: IASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSNFRGGI
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| AT4G13850.4 glycine-rich RNA-binding protein 2 | 1.3e-19 | 46.9 | Show/hide |
Query: ISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVD
ISSN +V S L S R +++KLF+GGLS+ T D L +AF+ +G VV+AKV+ DR + +S+GFGFV F E A A++EM+GK LNGR I V+
Subjt: ISSNRHVLPSLFTPPSRLVSFRGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVD
Query: YA--KPTSNFRGG
A +P+ + GG
Subjt: YA--KPTSNFRGG
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| AT5G06210.1 RNA binding (RRM/RBD/RNP motifs) family protein | 8.4e-35 | 71.29 | Show/hide |
Query: RGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSNF--RGGIPIARGPP
RG+ASKLF+GGLSF TT++GLSEAFS+ GQVVEA++V DRVSD+SKGFGFVTFAS DEA AL E NG+ LNGR IFVDYAK + GG PIARGPP
Subjt: RGIASKLFVGGLSFYTTDKGLSEAFSQYGQVVEAKVVTDRVSDKSKGFGFVTFASEDEAHTALTEMNGKPLNGRVIFVDYAKPTSNF--RGGIPIARGPP
Query: E
+
Subjt: E
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