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Cla97C11G208560 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C11G208560
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationCla97Chr11:2182311..2182679
RNA-Seq ExpressionCla97C11G208560
SyntenyCla97C11G208560
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061529.1 RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]1.9e-4884.21Show/hide
Query:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHI
        ATSAN+AA  IMDIESMFDLDTVL+GADDFYY    VAPPPVVVADLPTVA +D CAVCMEDFLP+EGGKQI CGHVYHQSCISSWLSVGDSCPLCRRHI
Subjt:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHI

Query:  SSGDKREAPKTVQV
        + GDK E  KTVQV
Subjt:  SSGDKREAPKTVQV

KAE8651508.1 hypothetical protein Csa_019333 [Cucumis sativus]5.9e-4582.14Show/hide
Query:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRH
        ATSANYAAS IMDIESMFDLDTVLTGADDFYY   VVAPPPV+VA+LPTV A +DVCAVCMEDFLP+EGGKQI CGHVYHQSC+SSWLS+ DSCPLCR H
Subjt:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRH

Query:  ISSGDKREAPKT
        I+ GDK E  KT
Subjt:  ISSGDKREAPKT

XP_011650093.1 E3 ubiquitin-protein ligase RNF115 [Cucumis sativus]1.4e-4682.61Show/hide
Query:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRH
        ATSANYAAS IMDIESMFDLDTVLTGADDFYY   VVAPPPV+VA+LPTV A +DVCAVCMEDFLP+EGGKQI CGHVYHQSC+SSWLS+ DSCPLCR H
Subjt:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRH

Query:  ISSGDKREAPKTVQV
        I+ GDK E  KTVQV
Subjt:  ISSGDKREAPKTVQV

XP_023537996.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]1.5e-4070.49Show/hide
Query:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDS
        MA VLP  AT + +AAS IMD+ESMFDLDTVLTGADD+Y ++ +  PP VVVADLPTV  +DVCAVCME+F  +EGGKQI CGHVYHQ+CISSWLSVGD 
Subjt:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDS

Query:  CPLCRRHISSGDKREAPKTVQV
        CPLCR H+SS +K E  K VQV
Subjt:  CPLCRRHISSGDKREAPKTVQV

XP_038877426.1 E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida]1.5e-4883.61Show/hide
Query:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDS
        MATVLP T TSA YAAS IMDIESMFDLDTVLTGADDFYYN+ VVAPPPVVVADLPTVA +DVCAVC+EDFLP+E GKQI CGHVYHQSC+SSWLSVGDS
Subjt:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDS

Query:  CPLCRRHISSGDKREAPKTVQV
        CPLCRRHI+S ++ EAPKT  V
Subjt:  CPLCRRHISSGDKREAPKTVQV

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ1 RING-type domain-containing protein6.8e-4782.61Show/hide
Query:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRH
        ATSANYAAS IMDIESMFDLDTVLTGADDFYY   VVAPPPV+VA+LPTV A +DVCAVCMEDFLP+EGGKQI CGHVYHQSC+SSWLS+ DSCPLCR H
Subjt:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRH

Query:  ISSGDKREAPKTVQV
        I+ GDK E  KTVQV
Subjt:  ISSGDKREAPKTVQV

A0A5A7V793 RING-H2 finger protein ATL5-like9.4e-4984.21Show/hide
Query:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHI
        ATSAN+AA  IMDIESMFDLDTVL+GADDFYY    VAPPPVVVADLPTVA +D CAVCMEDFLP+EGGKQI CGHVYHQSCISSWLSVGDSCPLCRRHI
Subjt:  ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHI

Query:  SSGDKREAPKTVQV
        + GDK E  KTVQV
Subjt:  SSGDKREAPKTVQV

A0A6J1FDN7 E3 ubiquitin-protein ligase RING1-like6.8e-3969.11Show/hide
Query:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSV-GD
        MA VLP  AT + +AA  IMD+ESMFDLDTVLTGADD+Y ++ +  PP VVVADLPTV  +DVCAVCME+F  +EGGKQI CGHVYHQ+CISSWLSV GD
Subjt:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSV-GD

Query:  SCPLCRRHISSGDKREAPKTVQV
         CPLCR H+SS +K E  K VQV
Subjt:  SCPLCRRHISSGDKREAPKTVQV

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like6.8e-2354.1Show/hide
Query:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDS
        MA V     T+ N AA+    IE +FDLD VL+GADDF   +  ++    +VADLPTV V DVCAVC+EDF P+E GKQI CGHVYH+SCISSWL+V + 
Subjt:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDS

Query:  CPLCRRHISSGDKREAPKTVQV
        CPLCR  I +G   E+P +  +
Subjt:  CPLCRRHISSGDKREAPKTVQV

A0A6J1HNM2 E3 ubiquitin-protein ligase RNF181-like6.1e-4069.92Show/hide
Query:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVA-PPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGD
        MA VLP  AT + +AAS IMD+ESMFDLDTVLTGADD+Y ++ ++  PP VVV+DLPTV  +DVCAVCME+F  +EGGKQI CGHVYHQSCISSWLSVGD
Subjt:  MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVA-PPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGD

Query:  SCPLCRRHISSGDKREAPKTVQV
         CPLCR H+SS +K E  K VQV
Subjt:  SCPLCRRHISSGDKREAPKTVQV

SwissProt top hitse value%identityAlignment
Q6DIP3 E3 ubiquitin-protein ligase RNF1262.4e-0932Show/hide
Query:  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP
        LDT++T   + + N     PPP     +  LPT+ + +        C VC ED+   E  +Q+ C H++H  CI  WL   D+CP+CR+ +S  +    P
Subjt:  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP

Q6IRP0 E3 ubiquitin-protein ligase RNF126-B2.4e-0932Show/hide
Query:  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP
        LDT++T   + + N     PPP     +  LPT+ + +        C VC ED+   E  +Q+ C H++H  CI  WL   D+CP+CR+ +S  +    P
Subjt:  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP

Q91YL2 E3 ubiquitin-protein ligase RNF1266.4e-1035Show/hide
Query:  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP
        LDT++T   + + N     PPP     +  LPTV V +        C VC ED+   E  +Q+ C H++H SCI  WL   DSCP+CR+ ++  +    P
Subjt:  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP

Q9D0C1 E3 ubiquitin-protein ligase RNF1152.4e-0940.79Show/hide
Query:  PPPV---VVADLPTVAV--EDV-----CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGD
        PPP     +  LPTV V  E V     C VC ED+   E  +Q+ C H +H SCI  WL + D+CP+CR+ ++  D
Subjt:  PPPV---VVADLPTVAV--EDV-----CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGD

Q9Y4L5 E3 ubiquitin-protein ligase RNF1151.8e-0936.47Show/hide
Query:  PPPV---VVADLPTVAV--EDV-----CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQ
        PPP     +  LPTV V  E V     C VC ED+   E  +Q+ C H +H SCI  WL + D+CP+CR+ ++  D     ++ +
Subjt:  PPPV---VVADLPTVAV--EDV-----CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQ

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein7.0e-1239.74Show/hide
Query:  VAPPP-----------VVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSG
        + PPP           V++ D   V  E VCA+C E+F   E GK++ C H+YH SCI SWL++ ++CP+CR  ++ G
Subjt:  VAPPP-----------VVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSG

AT2G44330.1 RING/U-box superfamily protein8.5e-1050Show/hide
Query:  CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCR
        CA+C EDF+  E  +++ C H+YH  CI  WL+  +SCPLCR
Subjt:  CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCR

AT3G30460.1 RING/U-box superfamily protein8.5e-1047.83Show/hide
Query:  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHI
        VCA+C E+   NE   ++ C H YH+ CIS+WLS  ++CPLCR ++
Subjt:  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHI

AT3G60080.1 RING/U-box superfamily protein2.2e-1053.49Show/hide
Query:  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCR
        +CAVC EDF+  E  +++ C H+YH  CI  WLS  +SCPLCR
Subjt:  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCR

AT5G64920.1 COP1-interacting protein 86.5e-1046Show/hide
Query:  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGD
        VCAVC +  +  E GK++ CGH YH  CI  WL   +SCP+CR  + + D
Subjt:  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGTCTTGCCTGTAACAGCAACATCAGCTAATTATGCAGCCAGTAACATCATGGACATTGAATCAATGTTCGATCTCGACACCGTCCTCACCGGAGCCGACGA
CTTCTATTACAACGAAAACGTTGTAGCGCCACCACCCGTGGTGGTCGCCGACTTGCCAACGGTGGCTGTTGAGGACGTATGTGCGGTTTGCATGGAGGATTTCCTGCCGA
ACGAAGGCGGTAAACAGATCGCCTGCGGGCATGTGTACCATCAATCTTGTATATCCTCTTGGCTCTCCGTCGGCGACTCTTGCCCTCTTTGCCGCCGTCATATCTCCTCC
GGTGACAAAAGGGAGGCGCCTAAAACCGTACAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTGTCTTGCCTGTAACAGCAACATCAGCTAATTATGCAGCCAGTAACATCATGGACATTGAATCAATGTTCGATCTCGACACCGTCCTCACCGGAGCCGACGA
CTTCTATTACAACGAAAACGTTGTAGCGCCACCACCCGTGGTGGTCGCCGACTTGCCAACGGTGGCTGTTGAGGACGTATGTGCGGTTTGCATGGAGGATTTCCTGCCGA
ACGAAGGCGGTAAACAGATCGCCTGCGGGCATGTGTACCATCAATCTTGTATATCCTCTTGGCTCTCCGTCGGCGACTCTTGCCCTCTTTGCCGCCGTCATATCTCCTCC
GGTGACAAAAGGGAGGCGCCTAAAACCGTACAAGTTTAG
Protein sequenceShow/hide protein sequence
MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISS
GDKREAPKTVQV