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Cla97C11G208570 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C11G208570
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationCla97Chr11:2197534..2197851
RNA-Seq ExpressionCla97C11G208570
SyntenyCla97C11G208570
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599476.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4888.57Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL AAYPIEFLFDLDMVLSGADDFGCCQIS SDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL++G
Subjt:  CLVAG

KAG7030453.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-4888.57Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL AAYPIEFLFDLDMVLSGADDFGCCQIS SDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL++G
Subjt:  CLVAG

XP_022946863.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]1.3e-4889.52Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL AAYPIEFLFDLDMVLSGADDFGCCQIS SDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL+AG
Subjt:  CLVAG

XP_023545409.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]3.7e-4888.57Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL  AYPIEFLFDLDMVLSGADDFGCCQIS SDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL+AG
Subjt:  CLVAG

XP_038877422.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]9.8e-4990.48Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAAAAVM E TRNLPA YPIEFLFDLDMVLSGADDFGCCQIS +DSLVADLP VVADVCAVCLEDF PDE GKQIPCGHVYHESCISSWLTV DCCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        C VAG
Subjt:  CLVAG

TrEMBL top hitse value%identityAlignment
A0A0A0LKR7 RING-type domain-containing protein2.9e-4685.71Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAAAAVM E T NLP+ YPIEFLFDLD VLSGADD GCCQI+ SDS VAD PTVVADVCAVCL+DF PDE GKQIPCGHVYHESCISSWLTV DCCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CLVAG
Subjt:  CLVAG

A0A1S4DZX3 RING-H2 finger protein ATL5-like6.0e-4483.96Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGC-CQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLC
        MAAAAVM E T  LP+ YPIEFLFDLD VLSGADD  C CQI+ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWLTV DCCPLC
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGC-CQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLC

Query:  RCLVAG
        RCLVAG
Subjt:  RCLVAG

A0A5A7V2P4 RING-H2 finger protein ATL5-like6.0e-4483.96Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGC-CQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLC
        MAAAAVM E T  LP+ YPIEFLFDLD VLSGADD  C CQI+ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWLTV DCCPLC
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGC-CQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLC

Query:  RCLVAG
        RCLVAG
Subjt:  RCLVAG

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like1.3e-4180.58Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQI---STSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCP
        MAA AV+AE TRNL AAYP+E LFDLDMVLSG DDFGCC +   ++SDS+VADLPTVVADVCAVC EDFR DEGGKQIPCGHVYHE CISSWL V DCCP
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQI---STSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCP

Query:  LCR
        LCR
Subjt:  LCR

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like6.2e-4989.52Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL AAYPIEFLFDLDMVLSGADDFGCCQIS SDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL+AG
Subjt:  CLVAG

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING13.0e-0847.62Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        CAVC++DF      KQ+PC H+YH+ C+  WL + + CP+CR
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Q91YL2 E3 ubiquitin-protein ligase RNF1263.9e-0846.81Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCRCLVAG
        C VC ED+   E  +Q+PC H++H+SCI  WL   D CP+CR  + G
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCRCLVAG

Q9D0C1 E3 ubiquitin-protein ligase RNF1153.9e-0840.98Show/hide
Query:  VADLPTVVAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        +  LPTV            C VC ED+  +E  +Q+PC H +H SCI  WL + D CP+CR
Subjt:  VADLPTVVAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Q9VHI7 E3 ubiquitin-protein ligase Iruka6.0e-0947.62Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        C++C +DF+ DE  +++PC H+YHE+CI  WL +   CP+CR
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Q9Y4L5 E3 ubiquitin-protein ligase RNF1153.9e-0840.98Show/hide
Query:  VADLPTVVAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        +  LPTV            C VC ED+  +E  +Q+PC H +H SCI  WL + D CP+CR
Subjt:  VADLPTVVAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein3.0e-1146.3Show/hide
Query:  LVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        ++ D   V   VCA+C E+F   E GK++ C H+YH SCI SWL + + CP+CR
Subjt:  LVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

AT2G44330.1 RING/U-box superfamily protein5.6e-1052.38Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        CA+C EDF   E  +++PC H+YH  CI  WLT  + CPLCR
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

AT3G19950.1 RING/U-box superfamily protein6.2e-0937.88Show/hide
Query:  SDSLVADLPTVVA---------DVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        S S +  LPTV           + CAVC+++F      KQ+PC HV+H+ C+  WL + + CP+CR
Subjt:  SDSLVADLPTVVA---------DVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

AT3G30460.1 RING/U-box superfamily protein4.8e-0948.84Show/hide
Query:  VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        VCA+C E+   +E   ++PC H YH+ CIS+WL+  + CPLCR
Subjt:  VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

AT3G60080.1 RING/U-box superfamily protein9.6e-1051.16Show/hide
Query:  VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        +CAVC EDF   E  +++PC H+YH  CI  WL+  + CPLCR
Subjt:  VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCTGCTGTGATGGCTGAGGCGACAAGAAACTTACCGGCGGCATATCCAATCGAATTTCTGTTTGATCTGGACATGGTTCTGTCCGGTGCCGACGACTTTGG
TTGCTGCCAGATCAGCACTTCCGATTCACTTGTGGCGGATTTGCCGACGGTGGTGGCCGATGTTTGTGCCGTTTGTTTAGAGGATTTCCGGCCAGATGAGGGCGGAAAAC
AAATCCCCTGCGGACATGTGTACCATGAATCTTGTATTTCCTCTTGGCTTACCGTCGGCGACTGTTGCCCTCTCTGTCGGTGCCTCGTCGCCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCGCTGCTGTGATGGCTGAGGCGACAAGAAACTTACCGGCGGCATATCCAATCGAATTTCTGTTTGATCTGGACATGGTTCTGTCCGGTGCCGACGACTTTGG
TTGCTGCCAGATCAGCACTTCCGATTCACTTGTGGCGGATTTGCCGACGGTGGTGGCCGATGTTTGTGCCGTTTGTTTAGAGGATTTCCGGCCAGATGAGGGCGGAAAAC
AAATCCCCTGCGGACATGTGTACCATGAATCTTGTATTTCCTCTTGGCTTACCGTCGGCGACTGTTGCCCTCTCTGTCGGTGCCTCGTCGCCGGCTAA
Protein sequenceShow/hide protein sequence
MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCRCLVAG