; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cla97C11G213280 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C11G213280
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionWUSCHEL-related homeobox 5
Genome locationCla97Chr11:6627729..6628393
RNA-Seq ExpressionCla97C11G213280
SyntenyCla97C11G213280
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0099402 - plant organ development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR044555 - Protein WUSCHEL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646563.1 hypothetical protein Csa_005730 [Cucumis sativus]1.1e-4092.31Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN      NHKARERQKRRKL
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SLPQ
        SLPQ
Subjt:  SLPQ

KAG7016004.1 WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-3870.34Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVK GGGCGGE G GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISH LSFYGKIESKN      NHKARERQKRRK+
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SL-------PQHI------------NNNNISFFQLLLTTNILQIS
        SL        QH             NNNNI     +  T+ L IS
Subjt:  SL-------PQHI------------NNNNISFFQLLLTTNILQIS

XP_008441440.1 PREDICTED: WUSCHEL-related homeobox 5 [Cucumis melo]1.5e-4080.16Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN      NHKARERQKRRKL
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SLPQHIN-----NNNISFFQLLLTTN
        SLPQ  +     ++N+  F    TTN
Subjt:  SLPQHIN-----NNNISFFQLLLTTN

XP_031743670.1 WUSCHEL-related homeobox 7 [Cucumis sativus]1.1e-4092.31Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN      NHKARERQKRRKL
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SLPQ
        SLPQ
Subjt:  SLPQ

XP_038886577.1 WUSCHEL-related homeobox 7 [Benincasa hispida]1.7e-4179.39Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVKGGGGCGGESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN      NHKARERQKRRKL
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SLP----QHINNNNISFFQLLLTTNILQISQ
        SLP    QH      S  Q +  +++L ISQ
Subjt:  SLP----QHINNNNISFFQLLLTTNILQISQ

TrEMBL top hitse value%identityAlignment
A0A0A0KAB0 Homeobox domain-containing protein5.5e-4192.31Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN      NHKARERQKRRKL
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SLPQ
        SLPQ
Subjt:  SLPQ

A0A1S3B2Z9 WUSCHEL-related homeobox 57.2e-4180.16Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN      NHKARERQKRRKL
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SLPQHIN-----NNNISFFQLLLTTN
        SLPQ  +     ++N+  F    TTN
Subjt:  SLPQHIN-----NNNISFFQLLLTTN

A0A5A7UN53 WUSCHEL-related homeobox 57.2e-4180.16Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN      NHKARERQKRRKL
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SLPQHIN-----NNNISFFQLLLTTN
        SLPQ  +     ++N+  F    TTN
Subjt:  SLPQHIN-----NNNISFFQLLLTTN

A0A6J1FH52 WUSCHEL-related homeobox 5-like2.2e-3774.62Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVK GGGC GE G GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISH LSFYGKIESKN      NHKARERQKRRK+
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SL-------------PQHI------NNNNI
        SL             P H+      NNNNI
Subjt:  SL-------------PQHI------NNNNI

A0A6J1JWK4 WUSCHEL-related homeobox 5-like9.7e-3877.69Show/hide
Query:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL
        MEDGVCSRIYVK GGGCGGE G GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISH LSFYGKIESKN      NHKARERQKRRK+
Subjt:  MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKL

Query:  SLPQHINNNNISFFQLLLTTN
        SL    ++ +  F   L  +N
Subjt:  SLPQHINNNNISFFQLLLTTN

SwissProt top hitse value%identityAlignment
A2XZR3 Putative WUSCHEL-related homeobox 27.2e-1452.27Show/hide
Query:  SGGGGKGSGSSKCG---RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQK-RRKLSLPQHI
        SGGGG  +G++  G   RW PT EQ+ +L E++R GLRTP++ QIQ+I+ HLS YG+IE KN      NHKAR+RQK RR+L +  H+
Subjt:  SGGGGKGSGSSKCG---RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQK-RRKLSLPQHI

Q5W7C3 Putative WUSCHEL-related homeobox 27.2e-1452.27Show/hide
Query:  SGGGGKGSGSSKCG---RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQK-RRKLSLPQHI
        SGGGG  +G++  G   RW PT EQ+ +L E++R GLRTP++ QIQ+I+ HLS YG+IE KN      NHKAR+RQK RR+L +  H+
Subjt:  SGGGGKGSGSSKCG---RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQK-RRKLSLPQHI

Q8H1D2 WUSCHEL-related homeobox 55.5e-2269.23Show/hide
Query:  GGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKLSL
        G   G   +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS  LSFYGKIESKN      NHKARERQKRRK+S+
Subjt:  GGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKLSL

Q8W0F1 WUSCHEL-related homeobox 94.4e-1964.2Show/hide
Query:  KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARER----QKRRKLSLPQHINNNN
        KCGRWNPTAEQVKVLTELFR+GLRTPS++QIQ+IS HLS +GK+ESKN      NHKARER    ++RR  S P   +N++
Subjt:  KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARER----QKRRKLSLPQHINNNN

Q9FFK0 WUSCHEL-related homeobox 77.9e-2164.84Show/hide
Query:  VKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKLS
        +K  G C   +G GG G     +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQKIS  LSFYGKIESKN      NHKARERQK RK+S
Subjt:  VKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKLS

Arabidopsis top hitse value%identityAlignment
AT2G01500.1 Homeodomain-like superfamily protein2.1e-1358.73Show/hide
Query:  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRK
        RWNPT EQ+  L EL+RSG RTP+++QIQ+I+  L  YG+IE KN      NHKARER KRR+
Subjt:  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRK

AT2G28610.1 Homeodomain-like superfamily protein3.3e-1458.73Show/hide
Query:  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRK
        RW PT EQ+ +L E++RSG+RTP++ QIQ+I+ HL+FYG+IE KN      NHKAR+RQK RK
Subjt:  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRK

AT3G11260.1 WUSCHEL related homeobox 53.9e-2369.23Show/hide
Query:  GGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKLSL
        G   G   +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS  LSFYGKIESKN      NHKARERQKRRK+S+
Subjt:  GGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKLSL

AT3G18010.1 WUSCHEL related homeobox 11.5e-1461.9Show/hide
Query:  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRK
        RWNPT +Q++VL EL+R G RTPS+D IQ+I+  L  YGKIE KN      NHKARERQKRR+
Subjt:  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRK

AT5G05770.1 WUSCHEL related homeobox 75.6e-2264.84Show/hide
Query:  VKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKLS
        +K  G C   +G GG G     +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQKIS  LSFYGKIESKN      NHKARERQK RK+S
Subjt:  VKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKN------NHKARERQKRRKLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATGGGGTTTGTTCTAGAATATACGTAAAAGGGGGAGGAGGATGCGGCGGAGAGAGCGGCAGCGGCGGAGGCGGAAAAGGGAGTGGAAGTAGCAAATGTGGGAG
ATGGAATCCCACAGCAGAACAAGTAAAAGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGTGATCAGATTCAGAAAATCTCTCATCATCTCAGCTTTT
ACGGCAAGATCGAGAGCAAGAATAATCATAAAGCTCGCGAACGACAAAAGCGTCGCAAACTTTCTCTTCCTCAACACATCAACAACAACAACATTTCATTCTTCCAACTT
CTTCTAACCACCAACATTTTGCAGATCAGTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATGGGGTTTGTTCTAGAATATACGTAAAAGGGGGAGGAGGATGCGGCGGAGAGAGCGGCAGCGGCGGAGGCGGAAAAGGGAGTGGAAGTAGCAAATGTGGGAG
ATGGAATCCCACAGCAGAACAAGTAAAAGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGTGATCAGATTCAGAAAATCTCTCATCATCTCAGCTTTT
ACGGCAAGATCGAGAGCAAGAATAATCATAAAGCTCGCGAACGACAAAAGCGTCGCAAACTTTCTCTTCCTCAACACATCAACAACAACAACATTTCATTCTTCCAACTT
CTTCTAACCACCAACATTTTGCAGATCAGTCAATGA
Protein sequenceShow/hide protein sequence
MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNNHKARERQKRRKLSLPQHINNNNISFFQL
LLTTNILQISQ