| GenBank top hits | e value | %identity | Alignment |
|---|
| AHM88912.1 RNA polymerase beta [Lagenaria siceraria] | 9.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| AHM88970.1 RNA polymerase beta [Lagenaria siceraria] | 9.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| AHM91152.1 RNA polymerase beta, partial [Lagenaria siceraria] | 9.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| ASY96794.1 RNA polymerase beta' subunit [Cucumis melo var. momordica] | 9.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| YP_009560826.1 RpoC1 [Trichosanthes kirilowii] | 9.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1P8LE65 DNA-directed RNA polymerase subunit gamma | 4.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| A0A1X9Q1T5 DNA-directed RNA polymerase subunit beta' | 4.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| A0A218KG20 DNA-directed RNA polymerase subunit beta' | 4.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| A0A249RZJ2 DNA-directed RNA polymerase subunit beta' | 4.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| A0A6M3S6B8 DNA-directed RNA polymerase subunit beta' | 4.7e-129 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A6MM27 DNA-directed RNA polymerase subunit beta' | 7.0e-130 | 98.71 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| B1NWE1 DNA-directed RNA polymerase subunit beta' | 1.7e-128 | 97.42 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRET+LGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQ F+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| P11705 DNA-directed RNA polymerase subunit beta' | 7.7e-129 | 97.42 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAK KIREKEPIVW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLY+LTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| Q4VZP2 DNA-directed RNA polymerase subunit beta' | 1.3e-131 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| Q8S8Y0 DNA-directed RNA polymerase subunit beta' | 5.9e-129 | 97.42 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ EARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLYVLTSGNRRGIC NR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G35800.1 RNA polymerase II large subunit | 1.4e-21 | 29.39 | Show/hide |
Query: KLVQEAVDTLLDNGIRGQP-MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQTFLIRGLI-
+L+Q + T DN + GQP + KS ++ KEGR R L+GKRVD+S R+VI P++++ G+P IA+ L + ++ L+
Subjt: KLVQEAVDTLLDNGIRGQP-MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQTFLIRGLI-
Query: -RQHFASNIGVAKSKIREKE----------------PIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVH
H AK IR+ + +++ + + G VL NR P+LH++ I + ++ L+ V +NADFDGD+M +H
Subjt: -RQHFASNIGVAKSKIREKE----------------PIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVH
Query: VPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLYVLT
VP S E +AE LM ++S P+ QD L+G +T
Subjt: VPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLYVLT
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| AT5G60040.1 nuclear RNA polymerase C1 | 1.7e-22 | 31.73 | Show/hide |
Query: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEP
++GK GRFR L GKRV+++GR+VI P+L + G+P +A IE + + G + A N +G + +I ++
Subjt: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEP
Query: IVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDM
I + + + +G VL NR P+LHR+ I + ++ R + + VC +NADFDGD+M +HVP + EA+ EA LM NL + G+ + TQD
Subjt: IVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDM
Query: LIGLYVLT
L +++T
Subjt: LIGLYVLT
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| AT5G60040.2 nuclear RNA polymerase C1 | 1.7e-22 | 31.73 | Show/hide |
Query: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEP
++GK GRFR L GKRV+++GR+VI P+L + G+P +A IE + + G + A N +G + +I ++
Subjt: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEP
Query: IVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDM
I + + + +G VL NR P+LHR+ I + ++ R + + VC +NADFDGD+M +HVP + EA+ EA LM NL + G+ + TQD
Subjt: IVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDM
Query: LIGLYVLT
L +++T
Subjt: LIGLYVLT
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| ATCG00180.1 DNA-directed RNA polymerase family protein | 1.0e-128 | 96.57 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKS+IREK+PIVWEILQEVMQGHPVLLNRAPTLHRLGIQ+FQPILVEGR ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLYVLTSG RRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein | 1.3e-54 | 89.17 | Show/hide |
Query: MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
MFLLYEYDIFW FL+ISS IP+LAFLISGVL+P+ K PEKLSSYESGIEP+GDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVS FIEA IF
Subjt: MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Query: VLILIVGLVYAWRKGALEWS
VLILI+GLVYAWRKGALEWS
Subjt: VLILIVGLVYAWRKGALEWS
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