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Cla97C11G214380 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C11G214380
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionNAD(P)H-quinone oxidoreductase subunit 6, chloroplastic
Genome locationCla97Chr11:7768916..7771438
RNA-Seq ExpressionCla97C11G214380
SyntenyCla97C11G214380
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF1728903.1 unnamed protein product [Brassica napus]2.2e-1497.83Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

KAG2241182.1 hypothetical protein Bca52824_096832 [Brassica carinata]2.2e-1497.83Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

KAG4154841.1 hypothetical protein ERO13_D03G074976v2 [Gossypium hirsutum]2.2e-1497.83Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

KYP48942.1 hypothetical protein KK1_029343, partial [Cajanus cajan]1.9e-15100Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

QHO30183.1 3-ketoacyl-CoA synthase [Arachis hypogaea]9.7e-1597.83Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMA SHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

TrEMBL top hitse value%identityAlignment
A0A078E1E5 BnaC09g29260D protein1.0e-1497.83Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

A0A151S2B1 Uncharacterized protein (Fragment)9.4e-16100Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

A0A218VSE2 Uncharacterized protein1.0e-1497.83Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

A0A3P6GJR6 Uncharacterized protein1.0e-1497.83Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

A0A6D2HHK8 Uncharacterized protein1.0e-1497.83Show/hide
Query:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN
        TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Subjt:  TSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

SwissProt top hitse value%identityAlignment
B1NWK2 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic4.4e-1076.19Show/hide
Query:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT
        L    +INVLIIFAVMFM GS+Y KDFNLWTVG+GVT LVCT
Subjt:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT

Q06GK8 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic5.7e-1073.81Show/hide
Query:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT
        L    +INVLIIFAVMFMKGS+YS DF++WTVG+GVT LVCT
Subjt:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT

Q09WW5 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic3.3e-1073.81Show/hide
Query:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT
        L    +INVLIIFAVMFM GS+Y KDFNLWTVGNG T L+CT
Subjt:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT

Q2L958 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic5.7e-1071.43Show/hide
Query:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT
        L    +INVLI+FAVMFM GS+Y KDFNLWT+GNG+T LVCT
Subjt:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT

Q2QD38 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic7.2e-1385.71Show/hide
Query:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT
        L    +INVLIIFAVMFMKGS+YSKDFNLWTVGNGVTFLVCT
Subjt:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT

Arabidopsis top hitse value%identityAlignment
ATCG01080.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 69.0e-1171.43Show/hide
Query:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT
        L    +INVLIIFAVMFM  S+YS DFNLWT+GNG+T LVCT
Subjt:  LAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTAGCCTTCTCCTCATCATTTACTAAAATAGTGACCTCATTATTGCCTATTCTAGCAAAACCACCCATCAGAGCCATCGTTAACCATCTGTCATTAGGAGTAAG
GCAAGGATCCAACGATGTTGAAAATTCACCCCACCTTCTGGACATGGGAGATGATCGTAACATTATTGCTTTCGATGACCCAGAAAGTCTTTTGACTGCGATCTGTGATC
ATTTTTCTTTCTCTGGAGGAAAGCAATCCAAATCAAATCAGTACTGTAGCAGTCCGCTTTCAAGGATCTATGTTCCTGAACAGTCTCGAAGAAGGCCACCAGCACCCGAC
TTACCAGAATGTCCCGTGGCAGCACAATGCAAGTCTTGGTTCCTCTTGGAAGCACCATCAGTATTGAATTTTAACCGGAAGGAAATTCCCAAGCAATCAACTTGCTTACC
TTCATACTTGGCTCAGTTTTCTTCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAAAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAATG
GAGTTACTTTTCTGGTTTGTACAAGGACAATGCCCTTTGAGGCGACTTCGGGCATGGCTAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCAC
CGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTAGCCTTCTCCTCATCATTTACTAAAATAGTGACCTCATTATTGCCTATTCTAGCAAAACCACCCATCAGAGCCATCGTTAACCATCTGTCATTAGGAGTAAG
GCAAGGATCCAACGATGTTGAAAATTCACCCCACCTTCTGGACATGGGAGATGATCGTAACATTATTGCTTTCGATGACCCAGAAAGTCTTTTGACTGCGATCTGTGATC
ATTTTTCTTTCTCTGGAGGAAAGCAATCCAAATCAAATCAGTACTGTAGCAGTCCGCTTTCAAGGATCTATGTTCCTGAACAGTCTCGAAGAAGGCCACCAGCACCCGAC
TTACCAGAATGTCCCGTGGCAGCACAATGCAAGTCTTGGTTCCTCTTGGAAGCACCATCAGTATTGAATTTTAACCGGAAGGAAATTCCCAAGCAATCAACTTGCTTACC
TTCATACTTGGCTCAGTTTTCTTCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAAAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAATG
GAGTTACTTTTCTGGTTTGTACAAGGACAATGCCCTTTGAGGCGACTTCGGGCATGGCTAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCAC
CGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGA
Protein sequenceShow/hide protein sequence
MSLAFSSSFTKIVTSLLPILAKPPIRAIVNHLSLGVRQGSNDVENSPHLLDMGDDRNIIAFDDPESLLTAICDHFSFSGGKQSKSNQYCSSPLSRIYVPEQSRRRPPAPD
LPECPVAAQCKSWFLLEAPSVLNFNRKEIPKQSTCLPSYLAQFSSINVLIIFAVMFMKGSKYSKDFNLWTVGNGVTFLVCTRTMPFEATSGMASSHSVTGGVYKARERIH
RRMADRRLLAIPASCRRVAAYNPN