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Cla97C11G214733 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C11G214733
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionPseudouridylate synthase 7-like protein isoform X1
Genome locationCla97Chr11:9435491..9438641
RNA-Seq ExpressionCla97C11G214733
SyntenyCla97C11G214733
Gene Ontology termsGO:0006506 - GPI anchor biosynthetic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0032991 - protein-containing complex (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0004197 - cysteine-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031952.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]6.1e-1946.55Show/hide
Query:  SIDNGTLNLLN-------VSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEINSLRPDL
        S+ +GT++ +        + + K++ KENLCGFIP+  EISDE+ GNIFLNFG I+  +PPSK  GD +  +F+N +DIVRL++VM+DE +    L P  
Subjt:  SIDNGTLNLLN-------VSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEINSLRPDL

Query:  AFLLPSRNAPSYLRCP
         +LLPS + PS  R P
Subjt:  AFLLPSRNAPSYLRCP

TYK16775.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.8e-2651.52Show/hide
Query:  SSMKEIIGGQTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNR
        SSMK++        IGA+F GLE+I   T+N +NVS+ K++ KENLCGFIP+  EISDE+ GNIFLNFG I+  +PPSK  GD +  +F+N +DIVRL++
Subjt:  SSMKEIIGGQTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNR

Query:  VMQDEEVEINSLRPDLAFLLPSRNAPSYLRCP
        VM+DE +    L P   +LLPS + PS  R P
Subjt:  VMQDEEVEINSLRPDLAFLLPSRNAPSYLRCP

TYK22383.1 uncharacterized protein E5676_scaffold173G00060 [Cucumis melo var. makuwa]1.5e-1758.02Show/hide
Query:  TFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTN
        TFEAI A+F GLE+I + T+N LNVS+ K+++K+NLC FIP+  EI+D+KRGN FL FGDI+SI+ PSK +GD ++ D +N
Subjt:  TFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTN

TYK28792.1 pseudouridylate synthase 7-like protein isoform X1 [Cucumis melo var. makuwa]1.2e-2251.82Show/hide
Query:  QTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEI
        +TFEAIG +F GLE+I   TLN  NV + K+++K NLCGF+P+  EI+DE RG  FLN+GDI  + P  K KGD  +KDF NPID++R+ +VM+DEE E 
Subjt:  QTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEI

Query:  NSLRPDLAFL
          + P+  F+
Subjt:  NSLRPDLAFL

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]7.9e-2752.31Show/hide
Query:  QTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEI
        QTFEAIG YF GLESI    LNL+ V    +KVKENLCGF+P+  E+S+EKRG+I+LNFGDI++ +PPSK KGD +  DFTNPID++RLN V   E +  
Subjt:  QTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEI

Query:  NSLRPDLAFLLPSRNAPSYLRCPSVSKTKN
        + L     FL  S       R P V    N
Subjt:  NSLRPDLAFLLPSRNAPSYLRCPSVSKTKN

TrEMBL top hitse value%identityAlignment
A0A5A7SLN9 Retrotransposable element Tf22.9e-1946.55Show/hide
Query:  SIDNGTLNLLN-------VSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEINSLRPDL
        S+ +GT++ +        + + K++ KENLCGFIP+  EISDE+ GNIFLNFG I+  +PPSK  GD +  +F+N +DIVRL++VM+DE +    L P  
Subjt:  SIDNGTLNLLN-------VSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEINSLRPDL

Query:  AFLLPSRNAPSYLRCP
         +LLPS + PS  R P
Subjt:  AFLLPSRNAPSYLRCP

A0A5A7V878 DUF4283 domain-containing protein8.8e-1643.12Show/hide
Query:  FEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEI-N
        ++AIG +F G ESI   T+NL+N S+ K+KV +NLCGF+P+  E+ D  R NIFLNFGDI  ++ P   +   ++    N ID++R+N+V+ DE  E  +
Subjt:  FEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEI-N

Query:  SLRPDLAFL
         ++ + AFL
Subjt:  SLRPDLAFL

A0A5D3CZ35 DNA/RNA polymerases superfamily protein8.5e-2751.52Show/hide
Query:  SSMKEIIGGQTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNR
        SSMK++        IGA+F GLE+I   T+N +NVS+ K++ KENLCGFIP+  EISDE+ GNIFLNFG I+  +PPSK  GD +  +F+N +DIVRL++
Subjt:  SSMKEIIGGQTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNR

Query:  VMQDEEVEINSLRPDLAFLLPSRNAPSYLRCP
        VM+DE +    L P   +LLPS + PS  R P
Subjt:  VMQDEEVEINSLRPDLAFLLPSRNAPSYLRCP

A0A5D3DFR0 Uncharacterized protein7.2e-1858.02Show/hide
Query:  TFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTN
        TFEAI A+F GLE+I + T+N LNVS+ K+++K+NLC FIP+  EI+D+KRGN FL FGDI+SI+ PSK +GD ++ D +N
Subjt:  TFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTN

A0A5D3DYX0 Pseudouridylate synthase 7-like protein isoform X15.7e-2351.82Show/hide
Query:  QTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEI
        +TFEAIG +F GLE+I   TLN  NV + K+++K NLCGF+P+  EI+DE RG  FLN+GDI  + P  K KGD  +KDF NPID++R+ +VM+DEE E 
Subjt:  QTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEEVEI

Query:  NSLRPDLAFL
          + P+  F+
Subjt:  NSLRPDLAFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAACAAATCATCCATGAAGGAGATTATTGGTGGACAAACATTTGAAGCCATTGGAGCATACTTTAGTGGATTGGAAAGCATAGATAATGGAACATTGAATCTTCT
TAATGTTTCGAAGCAAAAATTAAAAGTTAAGGAAAATCTTTGCGGTTTTATTCCATCAAGAACTGAGATTTCAGATGAAAAGAGGGGGAATATCTTCTTAAATTTTGGAG
ACATTACTTCAATCGATCCACCAAGTAAGTCAAAAGGTGATCCATATGTTAAAGATTTTACTAATCCTATTGATATCGTTCGGTTAAATCGAGTTATGCAGGATGAAGAG
GTGGAGATTAACTCTTTAAGGCCCGACTTGGCTTTTCTTTTACCTTCTCGGAACGCCCCAAGTTATTTAAGATGTCCATCAGTCTCGAAGACAAAGAACTGGTTCATTCC
GACAAATAATATAGAATTTGACCATAAAACCTCCTCTGTTTCTGACTCCAGTGTAACTCAACAAAGAAAGAAGAACTTGGCAAAATCAGGTGTGAACACGGTTAAGGTTC
AAGAAAAGGCGGAATTGGAGAGGAGAAAGAAAAAAGGCGGTCGTTCGTCTTTAGAGCCATCAATAAAGGGGCGATTAGAAACGTTGACAAATGGCAACACTACAAAGGGA
CAAAATGCGACCTTCGATATGCCATTAAAAGCTTCCCAACGAGCACATGATGTTATTAAATGTGGCGTTTCATCTGCAGATCCTAATTTGAAAGGAAGTGTCTGCAACAA
CTCCATTAATGCCATGACAACTAAGAAAGTAATTAGTAGCCTTTCTTCTGGAATGCCAACCACCGAAGTTGTTAACTGGACATTGGCCTCATCCCCTTTAATCCCTTCCA
AAAATGGCGACACTTCTTCCTCTGCTCGAGCTCAGTGGTCGACGAGTTCTAAAAAAACGATCTCATTTTTTGAAGTCGTTTCCAAAGCACTTCATTCGGAAAAAGACTTC
CTTCCTCAATTCTTGGAGTATGAATCGGATGGAGACTCAATTGTAAGCCCTAGCAGTGATGAACTGGATAAATCCAAAACAAGAGAAGCTCATGATGATGAAGAAGCGGA
CATTGAATATGGCCAAGAATTAAATTCCATATTTCAGGTAGAGAAGTTCAGACATTGGGCAAGGCAGACCATTGGATCATTGGCGACAGAAGCAGCTCATTGTTTGTCCT
TAATGAAGATCCTTTCGTGGAACACAAGAGGATTAGGAGACATCTCCAAACGTTTAGTGCTAAAAAGATGTTTGAAGAAATTGAATCCAGATCAGATTTTGATTGGCCCA
AGACTTAAAAAGCTTCCACAACTACTTTGGATAAACGCGGTCAAAGCATTACTTGTAGAAATTGGGTTCGAACGAAACCAAAGAGTCCTCAAGAACAAAGCCATTTGTTG
GATAGATCGCTATGAGATCGCTAGGCTTAATGCATCCTCGTGGTGCTCTCTTTCAAAGCCCTTCAAAGATTTCTCCATCCAAGATTTAAGTCTCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCAACAAATCATCCATGAAGGAGATTATTGGTGGACAAACATTTGAAGCCATTGGAGCATACTTTAGTGGATTGGAAAGCATAGATAATGGAACATTGAATCTTCT
TAATGTTTCGAAGCAAAAATTAAAAGTTAAGGAAAATCTTTGCGGTTTTATTCCATCAAGAACTGAGATTTCAGATGAAAAGAGGGGGAATATCTTCTTAAATTTTGGAG
ACATTACTTCAATCGATCCACCAAGTAAGTCAAAAGGTGATCCATATGTTAAAGATTTTACTAATCCTATTGATATCGTTCGGTTAAATCGAGTTATGCAGGATGAAGAG
GTGGAGATTAACTCTTTAAGGCCCGACTTGGCTTTTCTTTTACCTTCTCGGAACGCCCCAAGTTATTTAAGATGTCCATCAGTCTCGAAGACAAAGAACTGGTTCATTCC
GACAAATAATATAGAATTTGACCATAAAACCTCCTCTGTTTCTGACTCCAGTGTAACTCAACAAAGAAAGAAGAACTTGGCAAAATCAGGTGTGAACACGGTTAAGGTTC
AAGAAAAGGCGGAATTGGAGAGGAGAAAGAAAAAAGGCGGTCGTTCGTCTTTAGAGCCATCAATAAAGGGGCGATTAGAAACGTTGACAAATGGCAACACTACAAAGGGA
CAAAATGCGACCTTCGATATGCCATTAAAAGCTTCCCAACGAGCACATGATGTTATTAAATGTGGCGTTTCATCTGCAGATCCTAATTTGAAAGGAAGTGTCTGCAACAA
CTCCATTAATGCCATGACAACTAAGAAAGTAATTAGTAGCCTTTCTTCTGGAATGCCAACCACCGAAGTTGTTAACTGGACATTGGCCTCATCCCCTTTAATCCCTTCCA
AAAATGGCGACACTTCTTCCTCTGCTCGAGCTCAGTGGTCGACGAGTTCTAAAAAAACGATCTCATTTTTTGAAGTCGTTTCCAAAGCACTTCATTCGGAAAAAGACTTC
CTTCCTCAATTCTTGGAGTATGAATCGGATGGAGACTCAATTGTAAGCCCTAGCAGTGATGAACTGGATAAATCCAAAACAAGAGAAGCTCATGATGATGAAGAAGCGGA
CATTGAATATGGCCAAGAATTAAATTCCATATTTCAGGTAGAGAAGTTCAGACATTGGGCAAGGCAGACCATTGGATCATTGGCGACAGAAGCAGCTCATTGTTTGTCCT
TAATGAAGATCCTTTCGTGGAACACAAGAGGATTAGGAGACATCTCCAAACGTTTAGTGCTAAAAAGATGTTTGAAGAAATTGAATCCAGATCAGATTTTGATTGGCCCA
AGACTTAAAAAGCTTCCACAACTACTTTGGATAAACGCGGTCAAAGCATTACTTGTAGAAATTGGGTTCGAACGAAACCAAAGAGTCCTCAAGAACAAAGCCATTTGTTG
GATAGATCGCTATGAGATCGCTAGGCTTAATGCATCCTCGTGGTGCTCTCTTTCAAAGCCCTTCAAAGATTTCTCCATCCAAGATTTAAGTCTCAACTAG
Protein sequenceShow/hide protein sequence
MPNKSSMKEIIGGQTFEAIGAYFSGLESIDNGTLNLLNVSKQKLKVKENLCGFIPSRTEISDEKRGNIFLNFGDITSIDPPSKSKGDPYVKDFTNPIDIVRLNRVMQDEE
VEINSLRPDLAFLLPSRNAPSYLRCPSVSKTKNWFIPTNNIEFDHKTSSVSDSSVTQQRKKNLAKSGVNTVKVQEKAELERRKKKGGRSSLEPSIKGRLETLTNGNTTKG
QNATFDMPLKASQRAHDVIKCGVSSADPNLKGSVCNNSINAMTTKKVISSLSSGMPTTEVVNWTLASSPLIPSKNGDTSSSARAQWSTSSKKTISFFEVVSKALHSEKDF
LPQFLEYESDGDSIVSPSSDELDKSKTREAHDDEEADIEYGQELNSIFQVEKFRHWARQTIGSLATEAAHCLSLMKILSWNTRGLGDISKRLVLKRCLKKLNPDQILIGP
RLKKLPQLLWINAVKALLVEIGFERNQRVLKNKAICWIDRYEIARLNASSWCSLSKPFKDFSIQDLSLN