| GenBank top hits | e value | %identity | Alignment |
|---|
| ALO22144.1 RpoB [Cucurbita ficifolia] | 1.5e-91 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP +P + Q R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| ALO22167.1 RpoB [Cucurbita foetidissima] | 1.5e-91 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP +P + Q R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| YP_009447442.1 RNA polymerase beta subunit [Cucurbita maxima] | 1.5e-91 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP +P + Q R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| YP_009753166.1 RNA polymerase subunit beta [Trichosanthes truncata] | 2.5e-91 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP P + R + R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| YP_009753781.1 RNA polymerase subunit beta [Trichosanthes pilosa] | 2.5e-91 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP P + R + R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0S2IE41 DNA-directed RNA polymerase subunit beta | 7.1e-92 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP +P + Q R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| A0A0S2IFG3 DNA-directed RNA polymerase subunit beta | 7.1e-92 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP +P + Q R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| A0A0S2IGH2 DNA-directed RNA polymerase subunit beta | 7.1e-92 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP +P + Q R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| A0A0S2IHF1 DNA-directed RNA polymerase subunit beta | 7.1e-92 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP +P + Q R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| A0A2H4T1Y0 DNA-directed RNA polymerase subunit beta | 7.1e-92 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP +P + Q R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P06271 DNA-directed RNA polymerase subunit beta | 7.3e-94 | 71.48 | Show/hide |
Query: MIRKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEA
+++KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEA
Subjt: MIRKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEA
Query: SKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
SKQTA+PWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
Subjt: SKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
Query: YKSDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
YKSDHIRARQEVLGTTIIGGTIP P + R + R L L+ +HFL+
Subjt: YKSDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| Q33C46 DNA-directed RNA polymerase subunit beta | 7.3e-94 | 71.48 | Show/hide |
Query: MIRKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEA
+++KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEA
Subjt: MIRKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEA
Query: SKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
SKQTA+PWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
Subjt: SKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
Query: YKSDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
YKSDHIRARQEVLGTTIIGGTIP P + R + R L L+ +HFL+
Subjt: YKSDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| Q3C1G7 DNA-directed RNA polymerase subunit beta | 7.3e-94 | 71.48 | Show/hide |
Query: MIRKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEA
+++KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEA
Subjt: MIRKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEA
Query: SKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
SKQTA+PWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
Subjt: SKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLT
Query: YKSDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
YKSDHIRARQEVLGTTIIGGTIP P + R + R L L+ +HFL+
Subjt: YKSDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| Q4VZP1 DNA-directed RNA polymerase subunit beta | 4.3e-94 | 72.83 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP P + R + R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| Q8S8X9 DNA-directed RNA polymerase subunit beta | 2.8e-93 | 72.05 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTA+PWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP P + R + R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G29940.1 nuclear RNA polymerase A2 | 8.0e-11 | 30.58 | Show/hide |
Query: EQEASRKLVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVW
E+E+ L+ +L K+ + G ++ G G + + +G Y +L H V DK RS+G +T QP++GR + GG R GEME
Subjt: EQEASRKLVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVW
Query: ALEGFGVAHILQEMLTYKSDH
+L G +++L + L SDH
Subjt: ALEGFGVAHILQEMLTYKSDH
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| AT3G23780.1 nuclear RNA polymerase D2A | 4.4e-09 | 32.58 | Show/hide |
Query: GKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSD
G R+++GR+G + +G + +L+H +DK+ R++G +T+QP+ R + GG + GEME L G + L E L SD
Subjt: GKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSD
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| AT4G21710.1 DNA-directed RNA polymerase family protein | 3.7e-16 | 41.35 | Show/hide |
Query: GKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQ-EVLG
G R+++G TG P + +G Y +L H VDDKIH R G ++T+QP GR++ GG R GEME + G AH L+E L +SD R EV G
Subjt: GKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQ-EVLG
Query: TTII
I
Subjt: TTII
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| AT5G45140.1 nuclear RNA polymerase C2 | 5.3e-15 | 41.76 | Show/hide |
Query: YPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSD
Y GK ++ G +G P E + +G Y KL H V DK+H R SG ++T+QP G++K GG RVGEME L +G + ++ E L SD
Subjt: YPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSD
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| ATCG00190.1 RNA polymerase subunit beta | 1.7e-93 | 71.26 | Show/hide |
Query: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
+KREIKVGDKVAGRHGNK GQIFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEASK
Subjt: RKREIKVGDKVAGRHGNK------------------------------------GQIFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEASK
Query: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
QTA+PWVFEPEYPGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Subjt: QTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
SDHIRARQEVLGTTIIGGTIP P + R + R L L+ +HFL+
Subjt: SDHIRARQEVLGTTIIGGTIPIFLIRPINLMMGTQRFTMNFDRGLLLKQSHFLI
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