CuGenDBv2

Gene ID	Clc00G01055
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	heat shock factor-binding protein 1
Genome location	ClcCtg005:6213..9581
RNA-Seq Expression	Clc00G01055
Synteny	Clc00G01055
Gene Ontology terms	GO:0045892 - negative regulation of transcription, DNA-templated (biological process) GO:0070370 - cellular heat acclimation (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0003714 - transcription corepressor activity (molecular function)
InterPro domains	IPR009643 - Heat shock factor binding 1

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136039.1 heat shock factor-binding protein isoform X1 [Cucumis sativus]

2.7e-25

66.67

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQCEIL-----------------------------YMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSS
        MDGHDSEDAKQSTADMTIFVQNLLQQMVSF  C+ L                              MGSRINELEQSINDLKAEMGVEGSPSPLPPSK  
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQCEIL-----------------------------YMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSS

Query:  ADEVKKEEGSA
        ADEVKK+EGSA
Subjt:  ADEVKKEEGSA

XP_004136040.1 heat shock factor-binding protein isoform X2 [Cucumis sativus]

2.0e-25

80.9

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMTIFVQNLLQQM S  Q        +I  MGSRINELEQSINDLKAEMGVEGSPSPLPPSK  ADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

XP_008451602.1 PREDICTED: heat shock factor-binding protein 1 [Cucumis melo]

5.3e-26

82.02

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMTIFVQNLLQQM S  Q        +I  MGSRINELEQSINDLKAEMGVEGSPSPLPPSKS ADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

XP_022150885.1 heat shock factor-binding protein 1 [Momordica charantia]

7.7e-25

79.78

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMT+FVQNLLQQM S  Q        +I  MGSRINELEQSINDLKAEMGVEGSPSPLP SKS+ADE KKEEGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

XP_038899813.1 heat shock factor-binding protein isoform X1 [Benincasa hispida]

1.1e-26

83.15

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMTIFVQNLLQQM S  Q        +I  MGSRINELEQSINDLKAEMGVEGSPSPLPPSKSS+DEVKKEEGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BSN9 heat shock factor-binding protein 1

2.6e-26

82.02

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMTIFVQNLLQQM S  Q        +I  MGSRINELEQSINDLKAEMGVEGSPSPLPPSKS ADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

A0A6J1D9Q0 heat shock factor-binding protein 1

3.7e-25

79.78

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMT+FVQNLLQQM S  Q        +I  MGSRINELEQSINDLKAEMGVEGSPSPLP SKS+ADE KKEEGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

A0A6J1GMG8 heat shock factor-binding protein 1-like isoform X2

8.3e-25

77.53

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT+FVQNLLQQM S  Q        +I  MGSRINELEQSINDLK+EMGVEGSPSP+ PSKSSADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

A0A6J1JVW1 heat shock factor-binding protein 1-like isoform X2

6.4e-25

77.53

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT+FVQNLLQQM S  Q        +I  MGSRINELEQSINDLK+EMGVEGSPSP+ PSKSSADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

A0A6J1JXC9 heat shock factor-binding protein 1-like isoform X1

1.6e-23

76.74

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEE
        MDGHDSED KQSTADMT+FVQNLLQQM S  Q        +I  MGSRINELEQSINDLK+EMGVEGSPSP+ PSKSSADEVKK+E
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEE

SwissProt top hits

e value

%identity

Alignment

Q8GW48 Heat shock factor-binding protein

2.5e-18

62.92

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT FVQNLLQQM +  Q        +I  MG RINELEQSINDL+AEMGVEG+P   PP+  S DE K    S+
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

Arabidopsis top hits

e value

%identity

Alignment

AT4G15802.1 heat shock factor binding protein

1.8e-19

62.92

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT FVQNLLQQM +  Q        +I  MG RINELEQSINDL+AEMGVEG+P   PP+  S DE K    S+
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQ-------CEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

Sequences

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CDS sequence

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atggatgggcatgactctgaagatgcaaagcaaagcacggctgatatgaccatttttgtgcaaaatcttcttcaacagatggtgagtttcatacaatgtgagatc
ctctatatggggagccgcataaatgaattggagcagagcatcaacgacctaaaggccgagatgggtgtcgagggctctccgtcgccgctgcctccttcaaagtca
agtgcagatgaagtgaagaaagaggaaggttctgcctag

mRNA sequence

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Protein sequence

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MDGHDSEDAKQSTADMTIFVQNLLQQMVSFIQCEILYMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

Clc00G01055 (gene) of Watermelon (cordophanus) v2 genome