; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc00G01080 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc00G01080
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDesiccation-related protein PCC13-62-like
Genome locationClcCtg005:20922..22734
RNA-Seq ExpressionClc00G01080
SyntenyClc00G01080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068011.1 desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa]6.7e-4751.26Show/hide
Query:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----
        MVAPD+EV RFASNFEYLEGEF+L+SALG+GIDSINP+LAFGGPPPIGAQKANLD V A + EEFG QEIG LRA+IEAAGGRGIKRPLLN         
Subjt:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----

Query:  ---------QPHLDARE------------PAWEIVG------------SKRRD-----------------------------------IVPQSLGAENQT
                 +P  D               P   +VG            S++R                                    IVP+SLGAEN+T
Subjt:  ---------QPHLDARE------------PAWEIVG------------SKRRD-----------------------------------IVPQSLGAENQT

Query:  ESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
        ESNILAADV S SYSRTV+E+L I Y +GSE K GAFF
Subjt:  ESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

TYK18116.1 desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa]2.2e-4550.83Show/hide
Query:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLR--AIIEAAGGRGIKRPLLNHKVH---
        MVAPD+EV RFASNFEYLEGEF+L+SALG+GIDSINP+LAFGGPPPIGAQKANLD V A + EEFG QEIG LR  A+IEAAGGRGIKRPLLN       
Subjt:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLR--AIIEAAGGRGIKRPLLNHKVH---

Query:  -----------QPHLDARE------------PAWEIVG------------SKRRD-----------------------------------IVPQSLGAEN
                   +P  D               P   +VG            S++R                                    IVP+SLGAEN
Subjt:  -----------QPHLDARE------------PAWEIVG------------SKRRD-----------------------------------IVPQSLGAEN

Query:  QTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
        +TESNILAADV S SYSRTV+E+L I Y +GSE K GAFF
Subjt:  QTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

XP_004136041.1 desiccation-related protein PCC13-62 [Cucumis sativus]3.7e-4546.92Show/hide
Query:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----
        MVAPD+EV RFASNFEYLEGEF+L+ ALG GIDSINP+LAFGGPPPIGAQKANLD V ANI +EFGYQEIG LR++IEAAGGRGIKRPLLN         
Subjt:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----

Query:  ---------QPHLD----------------------------------AREPAWEIVGSKR---------------------------------------
                 +P  D                                  +R+ A  ++G++                                        
Subjt:  ---------QPHLD----------------------------------AREPAWEIVGSKR---------------------------------------

Query:  -----RD---IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
             RD   +VP SLGAEN+TESNILAADVNS SYSRTV+E+L I Y +GSE K GAFF
Subjt:  -----RD---IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

XP_008451603.2 PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo]1.1e-4446.15Show/hide
Query:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----
        MVAPD+EV RFASNFEYLEGEF+L+SALG+GIDSINP+LAFGGPPPIGAQKANLD V A + EEFG QEIG LRA+IEAAGGRGIKRPLLN         
Subjt:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----

Query:  ---------QPHLD----------------------------------AREPAWEIVGSKRRD-------------------------------------
                 +P  D                                  +R+ A  ++G++                                        
Subjt:  ---------QPHLD----------------------------------AREPAWEIVGSKRRD-------------------------------------

Query:  ----------IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
                  IVP+SLGAEN+TESNILAADV S SYSRTV+E+L I Y +GSE K GAFF
Subjt:  ----------IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

XP_023515237.1 desiccation-related protein PCC13-62-like [Cucurbita pepo subsp. pepo]1.1e-3337.6Show/hide
Query:  APDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN-----------
        A D +V  FA+NFEYLEGE +L  ALGRG+DSI+P+LA GGPPPIGAQ+ANLD +  NI EEFGY+EIG L+ +I+ +GG GI+RPLLN           
Subjt:  APDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN-----------

Query:  ----HKVHQP---------------------------------HLDAREPAWEIVGSKRRD---------------------------------------
             ++  P                                  L++R+ A +++ ++                                          
Subjt:  ----HKVHQP---------------------------------HLDAREPAWEIVGSKRRD---------------------------------------

Query:  --------IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
                +VP+SLGAEN+TE+N+LA D  SLSY+RT+QEIL I Y TGSE+  GAFF
Subjt:  --------IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

TrEMBL top hitse value%identityAlignment
A0A0A0K965 Uncharacterized protein1.8e-4546.92Show/hide
Query:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----
        MVAPD+EV RFASNFEYLEGEF+L+ ALG GIDSINP+LAFGGPPPIGAQKANLD V ANI +EFGYQEIG LR++IEAAGGRGIKRPLLN         
Subjt:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----

Query:  ---------QPHLD----------------------------------AREPAWEIVGSKR---------------------------------------
                 +P  D                                  +R+ A  ++G++                                        
Subjt:  ---------QPHLD----------------------------------AREPAWEIVGSKR---------------------------------------

Query:  -----RD---IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
             RD   +VP SLGAEN+TESNILAADVNS SYSRTV+E+L I Y +GSE K GAFF
Subjt:  -----RD---IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

A0A1S3BT08 desiccation-related protein PCC13-62-like5.2e-4546.15Show/hide
Query:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----
        MVAPD+EV RFASNFEYLEGEF+L+SALG+GIDSINP+LAFGGPPPIGAQKANLD V A + EEFG QEIG LRA+IEAAGGRGIKRPLLN         
Subjt:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----

Query:  ---------QPHLD----------------------------------AREPAWEIVGSKRRD-------------------------------------
                 +P  D                                  +R+ A  ++G++                                        
Subjt:  ---------QPHLD----------------------------------AREPAWEIVGSKRRD-------------------------------------

Query:  ----------IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
                  IVP+SLGAEN+TESNILAADV S SYSRTV+E+L I Y +GSE K GAFF
Subjt:  ----------IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

A0A5A7VQX7 Desiccation-related protein PCC13-62-like3.3e-4751.26Show/hide
Query:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----
        MVAPD+EV RFASNFEYLEGEF+L+SALG+GIDSINP+LAFGGPPPIGAQKANLD V A + EEFG QEIG LRA+IEAAGGRGIKRPLLN         
Subjt:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVH-----

Query:  ---------QPHLDARE------------PAWEIVG------------SKRRD-----------------------------------IVPQSLGAENQT
                 +P  D               P   +VG            S++R                                    IVP+SLGAEN+T
Subjt:  ---------QPHLDARE------------PAWEIVG------------SKRRD-----------------------------------IVPQSLGAENQT

Query:  ESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
        ESNILAADV S SYSRTV+E+L I Y +GSE K GAFF
Subjt:  ESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

A0A5D3D3T3 Desiccation-related protein PCC13-62-like1.0e-4550.83Show/hide
Query:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLR--AIIEAAGGRGIKRPLLNHKVH---
        MVAPD+EV RFASNFEYLEGEF+L+SALG+GIDSINP+LAFGGPPPIGAQKANLD V A + EEFG QEIG LR  A+IEAAGGRGIKRPLLN       
Subjt:  MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLR--AIIEAAGGRGIKRPLLNHKVH---

Query:  -----------QPHLDARE------------PAWEIVG------------SKRRD-----------------------------------IVPQSLGAEN
                   +P  D               P   +VG            S++R                                    IVP+SLGAEN
Subjt:  -----------QPHLDARE------------PAWEIVG------------SKRRD-----------------------------------IVPQSLGAEN

Query:  QTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
        +TESNILAADV S SYSRTV+E+L I Y +GSE K GAFF
Subjt:  QTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

A0A6J1KQW9 desiccation-related protein PCC13-62-like1.6e-3337.6Show/hide
Query:  APDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN-----------
        A D +V  FA+N EYLEGE +L  ALGRG+DSI+P+LA GGPPPIGA++ANLD +  NI EEFGY+EIG L+ +I+ +GG GI+RPLLN           
Subjt:  APDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN-----------

Query:  -------HKVHQPHLDA--------------------REPAWEIVGSKR---------------------------------------------------
                    P++D                       P   ++ S++                                                   
Subjt:  -------HKVHQPHLDA--------------------REPAWEIVGSKR---------------------------------------------------

Query:  ---RD---IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
           +D   +VP+SLGAEN+TE+N+LA D  SLSY+RT+QEIL I Y TGSE+ SGAFF
Subjt:  ---RD---IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

SwissProt top hitse value%identityAlignment
P22242 Desiccation-related protein PCC13-621.9e-1548.28Show/hide
Query:  DVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN
        DV +  F  N E LE EF+  +A G+GID + P LA GGP PIG QKANL     +I  +F YQE G++RAI  +    G  RPLL+
Subjt:  DVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN

Arabidopsis top hitse value%identityAlignment
AT1G47980.1 unknown protein9.1e-1849.43Show/hide
Query:  DVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN
        D ++  F  N EYLE EF+L  ALG G+D + P+L  GGP PIGAQKANLD +  +I  +F +QE+G+LRAI +    +G  RP L+
Subjt:  DVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN

AT1G47980.1 unknown protein2.3e-0546Show/hide
Query:  IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
        IVP+ +GAE Q   N+L  +  SLS+ RT +EIL I Y +G+E   G F+
Subjt:  IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF

AT3G62730.1 unknown protein8.2e-2733.59Show/hide
Query:  APDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN-----------
        A DV+   FA N E+ E EF+L  A G+G+D+ N +LA GGPPPIGA+KANLD +   I EEFGYQEIG+LRAI +  G  GI RPL+N           
Subjt:  APDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLN-----------

Query:  ---HKVHQPHLD----------------------------------------------------AREPAWEIVGSKRRD---------------------
            +   P  D                                                     R   +E    K  +                     
Subjt:  ---HKVHQPHLD----------------------------------------------------AREPAWEIVGSKRRD---------------------

Query:  ---------IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF
                  VP  LGAEN+T SNIL+AD  SLSY RT QEIL + Y TG E + G F+
Subjt:  ---------IVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atggtagcacctgatgtcgaagtttttcgatttgcttcaaattttgagtaccttgaaggtgagttttacttgaatagtgcccttgggagaggaattgactccattaatcc
aagtttggcatttggaggaccacctcctattggtgctcaaaaggctaatttagatcgtgtatacgctaacatcttcgaggaatttggataccaagaaattggaaACCTAA
GAGCTATAATTGAGGCAGCTGGTGGGAGAGGTATTAAAAGGCCATTGTTGAATCATAAAGTTCACCAACCTCACCTCGACGCTCGCGAACCAGCTTGGGAGATTGTGGGC
TCAAAGAGAAGGGATATAGTCCCTCAGTCACTCGGGGCAGAGAATCAAACTGAGAGCAACATTCTTGCTGCGGATGTTAACTCTCTCTCGTATTCTCGAACCGTACAAGA
GATCTTAGGAATATTTTATGTAACTGGTAGTGAAAAAAAGTCTGGTGCATTTTTCCGGAGGGTGCTAATGGTTTGA
mRNA sequenceShow/hide mRNA sequence
atggtagcacctgatgtcgaagtttttcgatttgcttcaaattttgagtaccttgaaggtgagttttacttgaatagtgcccttgggagaggaattgactccattaatcc
aagtttggcatttggaggaccacctcctattggtgctcaaaaggctaatttagatcgtgtatacgctaacatcttcgaggaatttggataccaagaaattggaaACCTAA
GAGCTATAATTGAGGCAGCTGGTGGGAGAGGTATTAAAAGGCCATTGTTGAATCATAAAGTTCACCAACCTCACCTCGACGCTCGCGAACCAGCTTGGGAGATTGTGGGC
TCAAAGAGAAGGGATATAGTCCCTCAGTCACTCGGGGCAGAGAATCAAACTGAGAGCAACATTCTTGCTGCGGATGTTAACTCTCTCTCGTATTCTCGAACCGTACAAGA
GATCTTAGGAATATTTTATGTAACTGGTAGTGAAAAAAAGTCTGGTGCATTTTTCCGGAGGGTGCTAATGGTTTGA
Protein sequenceShow/hide protein sequence
MVAPDVEVFRFASNFEYLEGEFYLNSALGRGIDSINPSLAFGGPPPIGAQKANLDRVYANIFEEFGYQEIGNLRAIIEAAGGRGIKRPLLNHKVHQPHLDAREPAWEIVG
SKRRDIVPQSLGAENQTESNILAADVNSLSYSRTVQEILGIFYVTGSEKKSGAFFRRVLMV