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Clc00G01410 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc00G01410
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationClcCtg008:29866..39075
RNA-Seq ExpressionClc00G01410
SyntenyClc00G01410
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599455.1 hypothetical protein SDJN03_09233, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2588.31Show/hide
Query:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        KRS SSELSPFKS CQSQPS ASTSR+ CTSRLP+ELSSQGSL+PLHSAIAAARLISSL+IESQ WGLVPQGISMPL
Subjt:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

XP_004139345.1 uncharacterized protein LOC101209110 [Cucumis sativus]6.3e-2791.14Show/hide
Query:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        F KRSSSSEL  FKSTCQSQPS ASTSRL CTSRLPVELSSQGSL+PLHSAIAAARLISSLTIESQ WGLVPQGISMPL
Subjt:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

XP_008458440.1 PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]5.3e-2689.87Show/hide
Query:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        F KRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELSSQGSL+PLHSAIAAARLISSLTIESQ WGLVPQGISMPL
Subjt:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

XP_023547330.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo]9.1e-2688.31Show/hide
Query:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        KRS SSELSPFKS+CQSQPS ASTSR+ CTSRLP+ELSSQGSL+PLHSAIAAARLISSL+IESQ WGLVPQGISMPL
Subjt:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

XP_038889658.1 uncharacterized protein LOC120079520 [Benincasa hispida]8.8e-2993.67Show/hide
Query:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        F KRSS SELSPFKS CQSQPSTASTSRLPCTSRLPVELSSQGSL+PLHSAIAAARLISSLTIESQ WGLVPQGISMPL
Subjt:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein3.0e-2791.14Show/hide
Query:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        F KRSSSSEL  FKSTCQSQPS ASTSRL CTSRLPVELSSQGSL+PLHSAIAAARLISSLTIESQ WGLVPQGISMPL
Subjt:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

A0A1S3C7U8 uncharacterized protein LOC103497847 isoform X12.6e-2689.87Show/hide
Query:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        F KRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELSSQGSL+PLHSAIAAARLISSLTIESQ WGLVPQGISMPL
Subjt:  FTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

A0A6J1G399 uncharacterized protein LOC1114503805.7e-2688.31Show/hide
Query:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        KRS SSELSPFKS CQSQPS ASTSR+ CTSRLP+ELSSQGSL+PLHSAIAAARLISSL+IESQ WGLVPQGISMPL
Subjt:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

A0A6J1HLX3 uncharacterized protein LOC1114657379.1e-2484.42Show/hide
Query:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        KRSSSS+ SPFKSTCQS+ S  STSRL CTSRLP+ELSSQGSL+PLHSAIA+ARLISSLTIES+ WGLVPQGISMPL
Subjt:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

A0A6J1KDE2 uncharacterized protein LOC1114938762.2e-2587.01Show/hide
Query:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        KRS SSELSPFKS+CQSQPS AS SR+ CTSRLP+ELSSQGSL+PLHSAIAAARLISSL+IESQ WGLVPQGISMPL
Subjt:  KRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein2.9e-1453.57Show/hide
Query:  LQSFTKRSSSS--ELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        + S T++ S +   +S   S  +S   +++TSR+  + RLPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQGISMPL
Subjt:  LQSFTKRSSSS--ELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

AT1G55205.2 unknown protein1.0e-1150.62Show/hide
Query:  LQSFTKRSSSS--ELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGIS
        + S T++ S +   +S   S  +S   +++TSR+  + RLPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG S
Subjt:  LQSFTKRSSSS--ELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGIS

AT3G13674.1 unknown protein5.0e-1461.64Show/hide
Query:  SSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        SS  SP KS   + PS+A++ RL  +SRLPVELS   S+IPLHSAIA++RL+SSL++ES+ WGLVPQG+S+PL
Subjt:  SSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

AT4G39300.1 unknown protein1.0e-0642.42Show/hide
Query:  KSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL
        K T  S P  + +  +P  SR+   L S  ++IPLHSA+A+ARL SS+  +S  W L+ QG++ PL
Subjt:  KSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMPL

AT4G39300.2 unknown protein1.9e-0540Show/hide
Query:  KSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMP
        K T  S P  + +  +P  SR+   L S  ++IPLHSA+A+ARL SS+  +S  W L+ Q + +P
Subjt:  KSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGISMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atgtgcaaagttattctttgccaggtggagcgatatcattggtttgaatggaggcctagtcagactcatggattctattggttgccgattgcctacctaccccgattggg
tgtaagtgaaagcatgggatttttcctcTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTTCACCAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCA
AATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATACCATTACATAGC
GCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATTTCAATGCCTTTATGA
mRNA sequenceShow/hide mRNA sequence
atgtgcaaagttattctttgccaggtggagcgatatcattggtttgaatggaggcctagtcagactcatggattctattggttgccgattgcctacctaccccgattggg
tgtaagtgaaagcatgggatttttcctcTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTTCACCAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCA
AATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATACCATTACATAGC
GCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATTTCAATGCCTTTATGACGGCTTTG
Protein sequenceShow/hide protein sequence
MCKVILCQVERYHWFEWRPSQTHGFYWLPIAYLPRLGVSESMGFFLSLGYRLACNPSLQSFTKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHS
AIAAARLISSLTIESQRWGLVPQGISMPL