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Clc00G02150 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc00G02150
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPrefoldin subunit 4
Genome locationClcCtg010:153608..154855
RNA-Seq ExpressionClc00G02150
SyntenyClc00G02150
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin
IPR016661 - Prefoldin, subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599316.1 putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. sororia]2.1e-5696.75Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+IRFHIGEVF HVPREEVE RLEEMKEENVKNLEKLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

KAG7030312.1 putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5696.75Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+IRFHIGEVF HVPREEVE RLEEMKEENVKNLEKLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

XP_022946140.1 probable prefoldin subunit 4 [Cucurbita moschata]2.1e-5696.75Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+IRFHIGEVF HVPREEVE RLEEMKEENVKNLEKLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

XP_022999107.1 probable prefoldin subunit 4 [Cucurbita maxima]2.1e-5696.75Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVF HVPREEVE RLEEMKEENVKNLEKLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELK+ILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

XP_023521156.1 probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo]9.6e-5797.56Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVF HVPREEVE RLEEMKEENVKNLEKLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

TrEMBL top hitse value%identityAlignment
A0A0A0LFH2 Prefoldin subunit 41.4e-5391.06Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETN+NLEDASNELILSD+DVIRF IGEVF H+P+EEVE RLE+MKEENV+NLEKL+EE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

A0A1S3C216 Prefoldin subunit 41.8e-5391.06Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD+DVIRF IGEVF H+P+EEVE RLE+MKEENV++L+KLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

A0A5D3D4H6 Prefoldin subunit 41.8e-5391.06Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD+DVIRF IGEVF H+P+EEVE RLE+MKEENV++L+KLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

A0A6J1G2Y9 Prefoldin subunit 41.0e-5696.75Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+IRFHIGEVF HVPREEVE RLEEMKEENVKNLEKLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

A0A6J1K9X7 Prefoldin subunit 41.0e-5696.75Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVF HVPREEVE RLEEMKEENVKNLEKLEEE+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELK+ILYGKFKDSINLEDD
Subjt:  AQMAELKKILYGKFKDSINLEDD

SwissProt top hitse value%identityAlignment
Q2TBR6 Prefoldin subunit 41.3e-1641.41Show/hide
Query:  IKFGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED--VIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEE
        +K     +  VT+EDQQ INKF+R  +R  EL++EI   K+   NLEDA  +++L+D+D  +I + IG+VF+   +EE +  LEE K+   + ++ LE  
Subjt:  IKFGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED--VIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEE

Query:  RDSIVAQMAELKKILYGKFKDSINLEDD
         +SI   +A+LK  LY KF  +INLE D
Subjt:  RDSIVAQMAELKKILYGKFKDSINLEDD

Q54TB7 Probable prefoldin subunit 43.0e-1338.66Show/hide
Query:  ESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED-VIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIVAQM
        E+EV   DQ+ IN F RLNNR HEL  E +  +E  +   D+ ++L ++D+D   ++ +GE F+ V +E+ ES +E+   +  ++++K++ + + I  + 
Subjt:  ESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED-VIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIVAQM

Query:  AELKKILYGKFKDSINLED
         ELK ILY KFK+SINLE+
Subjt:  AELKKILYGKFKDSINLED

Q9M4B5 Probable prefoldin subunit 43.1e-4271.07Show/hide
Query:  GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIVAQ
        GSE EVTWEDQQNIN FSRLNNR H+L+D+I++AKE  +NLEDA NELIL+DE+++RF IGEVF HVPR++VE+++EEMKE   K+LEKLE+E++SIV Q
Subjt:  GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIVAQ

Query:  MAELKKILYGKFKDSINLEDD
        MA LKK+LY KFKDSINLE+D
Subjt:  MAELKKILYGKFKDSINLEDD

Q9M4C4 Probable prefoldin subunit 44.6e-4674.8Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV
        G G+E++VTWEDQQNIN+F RLNNRFHEL DEIR AKE N+NLEDA NELIL DEDV+RF IGEVF H+P ++VE+RLE+MKE+  K LE+LEEE++SI+
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIV

Query:  AQMAELKKILYGKFKDSINLEDD
        AQMAELKKILYGKFKD+INLE+D
Subjt:  AQMAELKKILYGKFKDSINLEDD

Q9NQP4 Prefoldin subunit 41.0e-1641.41Show/hide
Query:  IKFGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED--VIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEE
        +K     +  VT+EDQQ INKF+R  +R  EL++EI   K+   NLEDA ++++L+D+D  +I + IG+VF+   +EE +  LEE K+   + ++ LE  
Subjt:  IKFGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED--VIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEE

Query:  RDSIVAQMAELKKILYGKFKDSINLEDD
         +SI   +A+LK  LY KF  +INLE D
Subjt:  RDSIVAQMAELKKILYGKFKDSINLEDD

Arabidopsis top hitse value%identityAlignment
AT1G08780.1 ABI3-interacting protein 32.2e-4371.07Show/hide
Query:  GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIVAQ
        GSE EVTWEDQQNIN FSRLNNR H+L+D+I++AKE  +NLEDA NELIL+DE+++RF IGEVF HVPR++VE+++EEMKE   K+LEKLE+E++SIV Q
Subjt:  GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEEERDSIVAQ

Query:  MAELKKILYGKFKDSINLEDD
        MA LKK+LY KFKDSINLE+D
Subjt:  MAELKKILYGKFKDSINLEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atgcagcaggtaaacgaaaccctaatcaaattcggcggaggatctgaatcggaggtcacatgggaggaccagcagaatattaacaaatttagtaggttaaacaat
cggttccacgagcttgaagacgagattagaaccgccaaggaaacaaatgataatctagaggatgcaagtaatgagttgattctcagtgatgaagatgtgattcgt
ttccatattggggaagtttttgtgcatgtaccaagggaagaagtagaaagcaggttggaagaaatgaaagaggaaaatgttaagaacttggagaaacttgaggaa
gaaagggattctatcgttgcccagatggccgagttgaagaaaattctgtatggaaagttcaaagattccatcaatctagaagatgattaa
mRNA sequenceShow/hide mRNA sequence
atgcagcaggtaaacgaaaccctaatcaaattcggcggaggatctgaatcggaggtcacatgggaggaccagcagaatattaacaaatttagtaggttaaacaat
cggttccacgagcttgaagacgagattagaaccgccaaggaaacaaatgataatctagaggatgcaagtaatgagttgattctcagtgatgaagatgtgattcgt
ttccatattggggaagtttttgtgcatgtaccaagggaagaagtagaaagcaggttggaagaaatgaaagaggaaaatgttaagaacttggagaaacttgaggaa
gaaagggattctatcgttgcccagatggccgagttgaagaaaattctgtatggaaagttcaaagattccatcaatctagaagatgattaa
Protein sequenceShow/hide protein sequence
MQQVNETLIKFGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFVHVPREEVESRLEEMKEENVKNLEKLEE
ERDSIVAQMAELKKILYGKFKDSINLEDD