
Clc00G02180 (gene) of Watermelon (cordophanus) v2 genome
| Gene ID | Clc00G02180 |
|---|---|
| Organism | Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2) |
| Description | DNA mismatch repair protein PMS1 |
| Genome location | ClcCtg020:4785..37424 |
| RNA-Seq Expression | Clc00G02180 |
| Synteny | Clc00G02180 |
| Gene Ontology terms | GO:0006298 - mismatch repair (biological process) GO:0006772 - thiamine metabolic process (biological process) GO:0009229 - thiamine diphosphate biosynthetic process (biological process) GO:0016310 - phosphorylation (biological process) GO:0032300 - mismatch repair complex (cellular component) GO:0004788 - thiamine diphosphokinase activity (molecular function) GO:0030983 - mismatched DNA binding (molecular function) GO:0030975 - thiamine binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0016301 - kinase activity (molecular function) GO:0005524 - ATP binding (molecular function) |
| InterPro domains | IPR036890 - Histidine kinase/HSP90-like ATPase superfamily IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup IPR014762 - DNA mismatch repair, conserved site IPR014790 - MutL, C-terminal, dimerisation IPR020568 - Ribosomal protein S5 domain 2-type fold IPR027417 - P-loop containing nucleoside triphosphate hydrolase IPR036371 - Thiamin pyrophosphokinase, thiamin-binding domain superfamily IPR036759 - Thiamin pyrophosphokinase, catalytic domain superfamily IPR006282 - Thiamin pyrophosphokinase IPR037198 - MutL, C-terminal domain superfamily IPR041569 - AAA ATPase, AAA+ lid domain IPR042120 - MutL, C-terminal domain, dimerisation subdomain IPR042121 - MutL, C-terminal domain, regulatory subdomain IPR013507 - DNA mismatch repair protein, S5 domain 2-like IPR007373 - Thiamin pyrophosphokinase, thiamin-binding domain IPR007371 - Thiamin pyrophosphokinase, catalytic domain IPR003960 - ATPase, AAA-type, conserved site IPR003959 - ATPase, AAA-type, core IPR003593 - AAA+ ATPase domain IPR002099 - DNA mismatch repair protein family, N-terminal |
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| Sequences | Show/hide sequences | ||||||||||||||||
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