CuGenDBv2

Gene ID	Clc00G02480
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	30S ribosomal protein S2, chloroplastic
Genome location	ClcCtg023:6439..7113
RNA-Seq Expression	Clc00G02480
Synteny	Clc00G02480
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001865 - Ribosomal protein S2 IPR005706 - Ribosomal protein S2, bacteria/mitochondria/plastid IPR018130 - Ribosomal protein S2, conserved site IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

YP_009317375.1 ribosomal protein S2 [Coccinia grandis]

5.8e-123

100

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

YP_009751895.1 ribosomal protein S2 [Cyclanthera pedata]

5.8e-123

100

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Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

YP_009751979.1 ribosomal protein S2 [Cionosicys macranthus]

2.2e-122

99.55

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Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGT NKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

YP_009752316.1 ribosomal protein S2 [Bryonia marmorata]

1.7e-122

100

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Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRN
        SIRLILNKLVFAISEGRSSSIRN
Subjt:  SIRLILNKLVFAISEGRSSSIRN

YP_009753078.1 ribosomal protein S2 [Corallocarpus boehmii]

1.3e-122

99.55

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Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAM+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE54 Ribosomal protein S2

2.8e-123

100

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

A0A1P8LEM9 Ribosomal protein S2

2.8e-123

100

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Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

A0A2Z2CQF0 30S ribosomal protein S2, chloroplastic

2.8e-123

100

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Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

A0A7T3QNI8 Ribosomal protein S2

2.8e-123

100

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Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

X2F5D2 30S ribosomal protein S2, chloroplastic

2.8e-123

100

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

SwissProt top hits

e value

%identity

Alignment

B1A924 30S ribosomal protein S2, chloroplastic

2.0e-118

94.64

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAA RARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTG LNRLPKRDAA+LKRQLSHLQTYLGGIKYMTGLPDIVII+DQQEEY AL+ECITLGIPTI LIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAI EG SS I+NS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

Q0ZJ31 30S ribosomal protein S2, chloroplastic

1.1e-119

95.96

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAA +ARCHYVNKKWLGGM TNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTG LNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEY AL+ECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRN
        SIRLILNKLVFAI EGRSS IRN
Subjt:  SIRLILNKLVFAISEGRSSSIRN

Q1KXW9 30S ribosomal protein S2, chloroplastic

2.6e-118

94.62

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNP+MAPYISAKRKGIHI NLTRTARFLSEACDLVFDAASRGKQFLIVGTKNK ADSVA AA RARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGL+RLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQ EEY ALQECITLGIPTICLIDTNCDPDLADISIPANDDAI+
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRN
        SIRLILNKLVFAI EGRS  IRN
Subjt:  SIRLILNKLVFAISEGRSSSIRN

Q49L09 30S ribosomal protein S2, chloroplastic

8.1e-120

95.96

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLT+TARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAA RARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQK G LNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEY AL+ECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRN
        SIRLILNKLVFAI EGRSS IRN
Subjt:  SIRLILNKLVFAISEGRSSSIRN

Q4VZP4 30S ribosomal protein S2, chloroplastic

1.4e-124

98.66

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAA+RGKQFLIVGTKNKAADSVARAATR RCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
        TRLHKFRDLRTEQKTGGLNRLPKRDAAM KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIRLILNKLVFAISEGRSSSIRNS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00160.1 ribosomal protein S2

2.1e-115

91.52

Show/hide

Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MM AGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAAD V+RAA RARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA
         RLHKFRDLRTEQKT G NRLPKRDAA+LKRQLS L+TYLGGIKYMTGLPDIVII+DQQEEY AL+ECITLGIPTI LIDTNC+PDLADISIPANDDAIA
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIA

Query:  SIRLILNKLVFAISEGRSSSIRNS
        SIR ILNKLVFAI EGRSS I+NS
Subjt:  SIRLILNKLVFAISEGRSSSIRNS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATCAATCTTACTAG
AACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCC
GGGCAGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTGGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGA
ACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGTATTAAATATATGAC
GGGGTTACCCGATATTGTAATAATCGTTGATCAGCAAGAAGAATATCGGGCTCTTCAAGAATGTATCACGTTAGGAATTCCAACTATTTGTTTAATTGATACAAATTGTG
ACCCCGATCTCGCAGATATTTCGATTCCAGCGAATGATGATGCTATAGCTTCAATCCGATTAATTCTTAACAAATTAGTATTTGCAATTTCTGAGGGTCGTTCTAGCTCT
ATACGAAATTCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLR
TEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAISEGRSSS
IRNS

Clc00G02480 (gene) of Watermelon (cordophanus) v2 genome