; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc00G02645 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc00G02645
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPhotosystem II reaction center protein H
Genome locationClcCtg023:66563..66784
RNA-Seq ExpressionClc00G02645
SyntenyClc00G02645
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0050821 - protein stabilization (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042301 - phosphate ion binding (molecular function)
InterPro domainsIPR001056 - Photosystem II reaction centre protein H
IPR036863 - Photosystem II reaction centre protein H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM91195.1 photosystem II phosphoprotein [Lagenaria siceraria]2.9e-3198.63Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        M TQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
QHB75993.1 photosystem II protein H [Cucumis melo subsp. melo]2.2e-3197.26Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSS+SGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
YP_004841812.1 photosystem II phosphoprotein [Cucumis melo subsp. melo]9.9e-3298.63Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSSRSGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
YP_009326018.1 photosystem II protein H [Citrullus lanatus]7.6e-32100Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
YP_009346513.1 photosystem II phosphoprotein [Cucumis x hytivus]2.9e-3197.26Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSSRSGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLF IFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
TrEMBL top hitse value%identityAlignment
A0A1P8LE91 Photosystem II reaction center protein H3.7e-32100Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
A0A1P8LEZ9 Photosystem II reaction center protein H3.7e-32100Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
A0A343A8D9 Photosystem II reaction center protein H3.7e-32100Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
A0A7T3USX9 Photosystem II phosphoprotein3.7e-32100Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
X2F4E0 Photosystem II reaction center protein H3.7e-32100Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
SwissProt top hitse value%identityAlignment
Q2PMQ6 Photosystem II reaction center protein H2.3e-3191.78Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTV+D+SRSGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFAIFL IILEIYNSSILLDGIS N
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Q3C1M6 Photosystem II reaction center protein H1.9e-3089.04Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTV++SSRSGPRRT VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FL IILEIYNSS+LLDGIS N
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Q49KW9 Photosystem II reaction center protein H8.7e-3190.41Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTV+ SSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FL IILEIYNSS+LLDGIS N
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Q4VZI9 Photosystem II reaction center protein H1.4e-3395.89Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTVDDSS+SGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFAIFLCIILEIYNSSILLDGISSN
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Q7FNS3 Photosystem II reaction center protein H1.9e-3089.04Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTV++SSRSGPRRT VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FL IILEIYNSS+LLDGIS N
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
Arabidopsis top hitse value%identityAlignment
ATCG00710.1 photosystem II reaction center protein H1.5e-3087.67Show/hide
Query:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN
        MATQTV+DSSRSGPR T VG LLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FL IILEIYNSS+LLDGIS N
Subjt:  MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACACAAACCGTTGACGATAGTTCTAGATCTGGGCCAAGACGAACTATTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTG
GGGAACTACACCTTTAATGGGTGTCGCGATGGGTCTATTTGCGATATTCCTATGTATTATTTTGGAAATTTATAATTCTTCCATTTTACTGGACGGAATTTCAAGCAATT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACACAAACCGTTGACGATAGTTCTAGATCTGGGCCAAGACGAACTATTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTG
GGGAACTACACCTTTAATGGGTGTCGCGATGGGTCTATTTGCGATATTCCTATGTATTATTTTGGAAATTTATAATTCTTCCATTTTACTGGACGGAATTTCAAGCAATT
AG
Protein sequenceShow/hide protein sequence
MATQTVDDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISSN