| GenBank top hits | e value | %identity | Alignment |
|---|
| KAD4981935.1 hypothetical protein E3N88_18606 [Mikania micrantha] | 3.8e-169 | 69.75 | Show/hide |
Query: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
ALEPAWITSRQIEAGRRAMT NARRGGKIWVRIFPDKPVT+RP ETRMGSGKG PEYWVAVVKP DNSGARELMCIRIIGASNRRYAHIGDVIV
Subjt: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
Query: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF-----------------------------------------
AVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+F
Subjt: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF-----------------------------------------
Query: ------------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
DVRGRV+SWSSAGTCGF+GTRRGTPFA QTAA NAIRAVVDQGMQRAEVMIK
Subjt: ------------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
Query: GPGLGRDAALRAIRRS---------------DSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNL
GPGL RDAALRAIRRS DSKRL YGRFILSPLMKGQADTIGIAMR+ALLGEIEGTCITRAKSEKI HEYSTI+GIQESVHEILMNL
Subjt: GPGLGRDAALRAIRRS---------------DSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNL
Query: KEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
KEIVLRSNLYGT +ASICV+GPG VTAQDIILPP VEIVDNTQHIA+LTEPI L I L+IE+NRGY I+ PN FQD
Subjt: KEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
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| KAD7117051.1 hypothetical protein E3N88_04319 [Mikania micrantha] | 1.9e-152 | 65.73 | Show/hide |
Query: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKP DNSGARELMCIRIIGASNRRYAHIGDVIV
Subjt: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
Query: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF-----------------------------------------
AVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDN AVVIDQEGNPKGTR F
Subjt: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF-----------------------------------------
Query: --------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS---------------DSK
DVRG+V+SWSSAGTCGF+GTRRGTPFAAQTAA NAIRAVVDQGMQRAEVMIKGPGLGRDA LRAIRRS DSK
Subjt: --------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS---------------DSK
Query: RLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPP
RL YGRFILS LMKGQADTIGIAMR+A C+ ++K ASICV+GPG VTAQDIILPP
Subjt: RLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPP
Query: SVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
VEIVDNTQHIA+LTEPI L I L+IE+NRGY I+ PN FQD SYPID +FMPVRNANHSIHSY
Subjt: SVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
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| KAF9660677.1 hypothetical protein SADUNF_SadunfPtG0000200 [Salix dunnii] | 1.0e-169 | 75.12 | Show/hide |
Query: MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP----------------D
MKG+SYRGNRICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRP+ETRMGSGKGSPEYWVAVVKP D
Subjt: MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP----------------D
Query: NSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFDVRGRVISWSSAG
NSGARELMCIRIIG SNRRYAHIGDVI+AVIK+AVPN+PLERSEVIRAVIVRT KELKR+N G
Subjt: NSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFDVRGRVISWSSAG
Query: TCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKS
CGF+GTRRGTPFAAQTAAGNAIR VVDQGMQRAEVMIKGPGLGRDAALRAIRRS GQADTIGIAMR+ALLGEIEGTCITRAKS
Subjt: TCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKS
Query: EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
+KIPHE+STI GIQES+HEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEI+DNTQHIA+L EPI+L I L+IERNRGY +++P NFQD
Subjt: EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
Query: ASYPIDAIFMPVRNANHSIHSY
SY IDA+FMPVRNANHS+HSY
Subjt: ASYPIDAIFMPVRNANHSIHSY
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| KAG6483930.1 hypothetical protein ZIOFF_060716 [Zingiber officinale] | 4.4e-157 | 77.81 | Show/hide |
Query: WI-TSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPDNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTP
WI +RQIEAGRRAMTR RRGGKIWVRIFPDKPVT+RP ETRMGS DNSGARELMCIRIIGA N RYAHIGDVIVAVIK+AVPN P
Subjt: WI-TSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPDNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTP
Query: LERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
LERSEVIRAVIVRTCKELKR+NG+IIRYDDNAAVVIDQEGNPKGTR+FDVRGRV+SW+SAGT GFKG RRGTP+AAQ AA NAIR VVDQGMQRA VMIK
Subjt: LERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
Query: GPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDA
GPGLGRDA LRAI RS GQADT+GIAMR+ALLGEIEGTCIT AKSEK+PHEYSTIVGI+ESVHEIL+NLKEIVLRSN++G RDA
Subjt: GPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDA
Query: SICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
SI VKGP VTAQDII PPSVEIVD TQHIANLTEPI+LCI L+I R+RGY + N QD SYPIDA+ MPVRNANHSIHSY
Subjt: SICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
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| RDY14681.1 DNA-directed RNA polymerase subunit alpha, partial [Mucuna pruriens] | 5.3e-187 | 72.28 | Show/hide |
Query: MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-----------------
MKGISYRGN ICFGRYA+QALEPAWITSRQIEAGRRAM+RN RRGG+IWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKP
Subjt: MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-----------------
Query: ------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNP
+GARELMCIRI+GASNRRYA+IGD++VAVIK+AVPNT LERSEVIRAVIVRTCKELKR NG+II+YDDNAAVVIDQEGNP
Subjt: ------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNP
Query: KGTRIF---------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEV
KGTRIF DVRGRVISWSSAGTCGFKGTRRGTPF AQTAAGNAIR V DQGMQRAEV
Subjt: KGTRIF---------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEV
Query: MIKGPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT
MIKGPGLGRDAALRAIRRS GQADTIGIAMR+ LLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT
Subjt: MIKGPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT
Query: RDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
+DASIC KGPG VTAQDIILPPSVEIVDNTQHIAN+TE +NLCI L+IERNRGYRI+T NFQD SYPIDA+FMPVRN NHSIHSY+
Subjt: RDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A371II16 Plastid-encoded RNA polymerase subunit alpha (Fragment) | 2.6e-187 | 72.28 | Show/hide |
Query: MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-----------------
MKGISYRGN ICFGRYA+QALEPAWITSRQIEAGRRAM+RN RRGG+IWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKP
Subjt: MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-----------------
Query: ------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNP
+GARELMCIRI+GASNRRYA+IGD++VAVIK+AVPNT LERSEVIRAVIVRTCKELKR NG+II+YDDNAAVVIDQEGNP
Subjt: ------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNP
Query: KGTRIF---------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEV
KGTRIF DVRGRVISWSSAGTCGFKGTRRGTPF AQTAAGNAIR V DQGMQRAEV
Subjt: KGTRIF---------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEV
Query: MIKGPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT
MIKGPGLGRDAALRAIRRS GQADTIGIAMR+ LLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT
Subjt: MIKGPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT
Query: RDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
+DASIC KGPG VTAQDIILPPSVEIVDNTQHIAN+TE +NLCI L+IERNRGYRI+T NFQD SYPIDA+FMPVRN NHSIHSY+
Subjt: RDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
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| A0A5N6N9A8 S1-like domain-containing protein | 2.9e-146 | 61.49 | Show/hide |
Query: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF------------
DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+F
Subjt: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF------------
Query: -----------------------------------------------------------------------------DVRGRVISWSSAGTCGFKGTRRG
DVRGRV+SWSSAGTCGF+GTRRG
Subjt: -----------------------------------------------------------------------------DVRGRVISWSSAGTCGFKGTRRG
Query: TPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS---------------DSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCI
TPFAAQTAA NAIRAVVDQGMQRAEVMIKGPGLGRDA LRAIRRS DSKRL YGRFILSPLMKGQADTIGIAMR+ALLGEIEGTCI
Subjt: TPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS---------------DSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCI
Query: TRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTP
TRAK EKI HEYSTI+GIQESVHEILMNLKEIVLRSNLYGT +ASICV+GPG VTAQDIILPP V IVDNTQHIA+LTEPI L I L+IE+NRGY I+ P
Subjt: TRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTP
Query: NNFQDASYPIDAIFMPVRNANHSIHSYLIIPPVQKPLKEHPITYLALY--------EVFEIRERNTIPAIFP----KELQMDLRVHQSLMVLGPLS
N FQD SYPID +FMPVRNANHSIHSY + KE I +L ++ E RN I + P KE ++L +Q ++ L P +
Subjt: NNFQDASYPIDAIFMPVRNANHSIHSYLIIPPVQKPLKEHPITYLALY--------EVFEIRERNTIPAIFP----KELQMDLRVHQSLMVLGPLS
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| A0A5N6NML1 S1-like domain-containing protein | 1.9e-169 | 69.75 | Show/hide |
Query: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
ALEPAWITSRQIEAGRRAMT NARRGGKIWVRIFPDKPVT+RP ETRMGSGKG PEYWVAVVKP DNSGARELMCIRIIGASNRRYAHIGDVIV
Subjt: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
Query: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF-----------------------------------------
AVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+F
Subjt: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF-----------------------------------------
Query: ------------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
DVRGRV+SWSSAGTCGF+GTRRGTPFA QTAA NAIRAVVDQGMQRAEVMIK
Subjt: ------------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
Query: GPGLGRDAALRAIRRS---------------DSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNL
GPGL RDAALRAIRRS DSKRL YGRFILSPLMKGQADTIGIAMR+ALLGEIEGTCITRAKSEKI HEYSTI+GIQESVHEILMNL
Subjt: GPGLGRDAALRAIRRS---------------DSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNL
Query: KEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
KEIVLRSNLYGT +ASICV+GPG VTAQDIILPP VEIVDNTQHIA+LTEPI L I L+IE+NRGY I+ PN FQD
Subjt: KEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
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| A0A5N6PW93 Ribosomal_L2_C domain-containing protein | 9.2e-153 | 65.73 | Show/hide |
Query: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKP DNSGARELMCIRIIGASNRRYAHIGDVIV
Subjt: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
Query: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF-----------------------------------------
AVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDN AVVIDQEGNPKGTR F
Subjt: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF-----------------------------------------
Query: --------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS---------------DSK
DVRG+V+SWSSAGTCGF+GTRRGTPFAAQTAA NAIRAVVDQGMQRAEVMIKGPGLGRDA LRAIRRS DSK
Subjt: --------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS---------------DSK
Query: RLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPP
RL YGRFILS LMKGQADTIGIAMR+A C+ ++K ASICV+GPG VTAQDIILPP
Subjt: RLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPP
Query: SVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
VEIVDNTQHIA+LTEPI L I L+IE+NRGY I+ PN FQD SYPID +FMPVRNANHSIHSY
Subjt: SVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
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| A0A6A5PE04 RPOLD domain-containing protein | 1.2e-123 | 64.78 | Show/hide |
Query: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF------------
+NSGARELMCIRIIGASN+RY +IGD++VAVIK+AVPNTPLERSEVIR VIVRTCKELKR NG+II Y+DNAAV+IDQEGNPKGTRIF
Subjt: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF------------
Query: -----------------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRA
DVRG VIS SS GTCGFKGTRRG FAAQT NAI V DQGM+RA
Subjt: -----------------------------------------------------DVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRA
Query: EVMIKGPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLY
EVMIKGPGLG DAALRAIRRS GQADTIGIAMR+ LLGEIEGTCITRAKSEKIPH+YST++GIQESVH+ILMNLKEIVLRSNLY
Subjt: EVMIKGPGLGRDAALRAIRRSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLY
Query: GTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
GTR+ SI VKGP VTAQDI+LPPSVEIVDNTQHIANLTEPIN I L+I N YRI+T FQD SYPIDA+FM VRN NHSIHSY+
Subjt: GTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
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| SwissProt top hits | e value | %identity | Alignment |
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| Q09WY5 DNA-directed RNA polymerase subunit alpha | 2.9e-87 | 92.35 | Show/hide |
Query: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
R+DSKRLYYGRF+L+PLM+GQADTIGIAMR+ALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPG VTAQD
Subjt: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
Query: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
IILPPSVEIVDNTQHIANLTEPI LCIEL+IERNRGYRI+TPNNFQ+ SYPIDA+FMPVRNANHSIHSY+
Subjt: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
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| Q2PMQ3 DNA-directed RNA polymerase subunit alpha | 2.3e-84 | 90 | Show/hide |
Query: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
R DSKRLYYGRFILSPLMKGQADTIGIAMR+ LLGEIEGTCITR KSEKIPHEYSTI+GI+ESVHEILMNLKEIVLRSNLYGTRDASIC KGPG VTAQD
Subjt: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
Query: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
IILPPSVEIVDNTQHIAN+TEP+NLCIELKIERNRGYRI+T NFQD SYPIDA FMPVRN NHSIHSY+
Subjt: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
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| Q49KW6 DNA-directed RNA polymerase subunit alpha | 1.2e-85 | 92.31 | Show/hide |
Query: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
R+DSKRLYYGRFILSPLMKGQADTIGIAMR+ALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTR+ASICVKGPGCVTAQD
Subjt: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
Query: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
IILP SVEIVDNTQ+IANLTEPINLCI L+IERNRGY I+TP NFQD SYPIDA+FMPVRNANHSIHSY
Subjt: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
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| Q4VZK3 DNA-directed RNA polymerase subunit alpha | 4.8e-90 | 95.88 | Show/hide |
Query: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
R+DSKRLYYGRFILSPLMKGQ DTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
Subjt: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
Query: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
IILPPSVEIVDNTQHIANL EPINLCIELKIERNRGY IQTPNNFQDASYP+DAIFMPVRN NHSIHSY+
Subjt: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSYL
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| Q9MTJ3 DNA-directed RNA polymerase subunit alpha | 5.1e-84 | 89.94 | Show/hide |
Query: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
R DSKRLYYGRFILSPLMKGQADTIGIAMR+ALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT +ASICVKGPGCVTAQD
Subjt: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
Query: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
I+LPPSVEI+DNTQHIA+L EPI+LCI L+IERNRGY I++PNNFQD SYPIDA+FMPVRNANHSIHSY
Subjt: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G28830.1 PLANT U-BOX 12 | 2.9e-26 | 71.95 | Show/hide |
Query: KGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP
KG+S +G IC RYA+Q LEPAWITSRQIEAGRRAMTRN RG + V IF DKPVT+RP ETRMG GKG+P +WVAVVKP
Subjt: KGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP
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| ATCG00740.1 RNA polymerase subunit alpha | 3.5e-80 | 84.02 | Show/hide |
Query: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
+ DSKRLYYGRFILSPLMKGQADTIGIAMR+ALLGEIEGTCITRAKSE IPH+YS I GIQESVHEILMNL EIVLRSNLYGTR+A ICV+GPG +TA+D
Subjt: RSDSKRLYYGRFILSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
Query: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
IILPP+VEI+DNTQHIA LTEPI+LCIELKIERNRGY ++ NNF+D SYPIDA+FMPV NANHSIHSY
Subjt: IILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVRNANHSIHSY
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| ATCG00750.1 ribosomal protein S11 | 1.5e-30 | 94.29 | Show/hide |
Query: IFDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS
+ DVRGRVISWSSAGTCGF+GTRRGTPFAAQTAAGNAIRAVVDQGMQRAEV IKGPGLGRDAALRAIRRS
Subjt: IFDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS
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| ATCG00780.1 ribosomal protein L14 | 1.1e-41 | 94.32 | Show/hide |
Query: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF
DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+A+PNTPLERSEVIRAVIVRTCKELKR NG IIRYDDNAAVVIDQEGNPKGTR+F
Subjt: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIF
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| ATCG00790.1 ribosomal protein L16 | 5.5e-41 | 91.57 | Show/hide |
Query: MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP
+KGIS RGNRICFGRYA+Q LEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKP
Subjt: MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP
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